Matrix_109 | GBF3 | Not available | Upstream | -774 |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -774 |
Matrix_224 | ERF1 | Not available | Upstream | -521 |
Matrix_244 | DREB2C | Not available | Upstream | -521 |
Matrix_252 | RAP2.6 | Not available | Upstream | -520 |
Matrix_261 | ATERF-1 | Not available | Upstream | -521 |
Matrix_296 | GBF2 | Not available | Upstream | -774 |
Matrix_300 | bZIP68;bZIP16 | Not available | Upstream | -774 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -521 |
Matrix_331 | GBF1 | Not available | Upstream | -774 |
Matrix_334 | AT3G23230 | Not available | Upstream | -521 |
Matrix_350 | ARR14 | Not available | Upstream | -442 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -521 |
Matrix_378 | ATERF1 | Not available | Upstream | -520 |
Matrix_396 | AP3 | Not available | Upstream | -126 |
Matrix_406 | ATERF-7 | Not available | Upstream | -522 |
Matrix_438 | AtbZIP63 | Not available | Upstream | -771 |
| | | Upstream | -851 |
Matrix_456 | bZIP60 | Not available | Upstream | -853 |
Matrix_462 | ATERF-8 | Not available | Upstream | -522 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -521 |
Matrix_497 | AP3 | Not available | Upstream | -29 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -521 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -521 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -521 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -521 |
Matrix_91 | CRF3 | Not available | Upstream | -521 |
Motif_155 | NODCON1GM | One of two putative nodulin consensus sequences; See also NODCON2GM; One of the consensus sequence motifs of organ-specific elements (OSE) characteristic of the promoters activated in infected cells of root nodules | Upstream | -635 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -1644 |
Motif_184 | PROXBBNNAPA | prox B (proximal portion of B-box) found in napA gene of Brassica napus; CA-rich sequence; Found between -130 and -124; Required for seed specific expression and ABA responsiveness; dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE | Upstream | -508 |
Motif_243 | TELOBOXATEEF1AA1 | telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristems | Upstream | -126 |
Motif_323 | MYB1LEPR | Tomato Pti4(ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1(GTTAGTT), G box (CACGTG)) | Upstream | -1033 |
| | | Upstream | -1095 |
Motif_347 | OPAQUE2ZMB32 | opaque-2 binding site of maize b-32 (type I ribosome-inactivating protein gene); O2; O2S; O2S and GARE form a gibberellin response complex (GARC) | Upstream | -851 |
Motif_358 | UP2ATMSD | Up2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis | Upstream | -126 |
Motif_399 | UPRMOTIFIAT | Motif I in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc. | Upstream | -853 |
Motif_426 | MYB58;MYB63 | MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis | Upstream | -594 |
Motif_440 | TGA1 binding site motif | Hex motif; Binding site of Arabidopsis bZIP protein TGA1 and G box binding factor GBF1; TGA1 and members of the GBF family differ in their DNA binding properties; G-Box-like element;TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG | Upstream | -853 |
Motif_558 | BOXIIPCCHS | Core of Box II/G box found in the parsley chs genes; Essential for light regulation | Upstream | -775 |
Motif_666 | MYB binding site promoter | A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes | Upstream | -593 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -640 |
| | | Upstream | -642 |
| | | Upstream | -644 |
Motif_70 | CANBNNAPA | Core of (CA)n element in storage protein genes in Brasica napus; embryo- and endosperm-specific transcription of napin (storage protein) gene, napA; seed specificity; activator and repressor | Upstream | -341 |
| | | Upstream | -486 |
| | | Upstream | -508 |