View conserved binding sites


Gene
AT1G14810
Description
semialdehyde dehydrogenase family protein
Alias
Not available
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-3
Matrix_138RRTF1Not availableUpstream-4
Matrix_146ORA47Not availableUpstream-3
Matrix_147ERF3;AT1G80580Not availableUpstream-5
Matrix_190ATERF1Not availableUpstream-2
Upstream-3
Upstream-53
Upstream-54
Matrix_224ERF1Not availableUpstream-4
Upstream-54
Upstream-55
Matrix_234RAP2.3Not availableUpstream-2
Upstream-3
Matrix_252RAP2.6Not availableUpstream-3
Matrix_261ATERF-1Not availableUpstream-4
Matrix_272DEAR4Not availableUpstream-3
Matrix_277RAP2.6Not availableUpstream-54
Upstream-55
Matrix_287ERF2Not availableUpstream-3
Matrix_295ERF1Not availableUpstream-5
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-4
Matrix_334AT3G23230Not availableUpstream-4
Upstream-56
Upstream-57
Matrix_343AT2G33710Not availableUpstream-3
Upstream-52
Upstream-53
Matrix_344ATERF15;AT4G18450Not availableUpstream-5
Matrix_355ERF10;ERF11Not availableUpstream-4
Matrix_360ORA59Not availableUpstream-5
Matrix_374AT5G07580;AT5G61590Not availableUpstream-4
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-4
Matrix_378ATERF1Not availableUpstream-3
Upstream-52
Upstream-53
Matrix_406ATERF-7Not availableUpstream-5
Matrix_409DEAR3Not availableUpstream-4
Matrix_426CRF1;CRF2Not availableUpstream-4
Upstream-56
Upstream-57
Matrix_45DRNNot availableUpstream-5
Matrix_462ATERF-8Not availableUpstream-5
Matrix_473RRTF1Not availableUpstream-3
Upstream-52
Upstream-53
Matrix_484ATERF13Not availableUpstream-5
Matrix_493AT1G22985;AT1G71130Not availableUpstream-4
Matrix_50ATERF14;AT5G43410Not availableUpstream-4
Upstream-54
Upstream-55
Matrix_506DRNL;ATERF-4Not availableUpstream-4
Upstream-56
Matrix_517ERF12Not availableUpstream-5
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-4
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-4
Matrix_91CRF3Not availableUpstream-4
Motif_125BOXIINTPATPBBox II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoterUpstream-64
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsUpstream-38
Upstream-62
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-5
Upstream-56
Motif_320AGCBOXNPGLBAGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC boxUpstream-56
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-67
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-67