Matrix_101 | ERF5 | Not available | Upstream | -3 |
Matrix_138 | RRTF1 | Not available | Upstream | -4 |
Matrix_146 | ORA47 | Not available | Upstream | -3 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -5 |
Matrix_190 | ATERF1 | Not available | Upstream | -2 |
| | | Upstream | -3 |
| | | Upstream | -53 |
| | | Upstream | -54 |
Matrix_224 | ERF1 | Not available | Upstream | -4 |
| | | Upstream | -54 |
| | | Upstream | -55 |
Matrix_234 | RAP2.3 | Not available | Upstream | -2 |
| | | Upstream | -3 |
Matrix_252 | RAP2.6 | Not available | Upstream | -3 |
Matrix_261 | ATERF-1 | Not available | Upstream | -4 |
Matrix_272 | DEAR4 | Not available | Upstream | -3 |
Matrix_277 | RAP2.6 | Not available | Upstream | -54 |
| | | Upstream | -55 |
Matrix_287 | ERF2 | Not available | Upstream | -3 |
Matrix_295 | ERF1 | Not available | Upstream | -5 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -4 |
Matrix_334 | AT3G23230 | Not available | Upstream | -4 |
| | | Upstream | -56 |
| | | Upstream | -57 |
Matrix_343 | AT2G33710 | Not available | Upstream | -3 |
| | | Upstream | -52 |
| | | Upstream | -53 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -5 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -4 |
Matrix_360 | ORA59 | Not available | Upstream | -5 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -4 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -4 |
Matrix_378 | ATERF1 | Not available | Upstream | -3 |
| | | Upstream | -52 |
| | | Upstream | -53 |
Matrix_406 | ATERF-7 | Not available | Upstream | -5 |
Matrix_409 | DEAR3 | Not available | Upstream | -4 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -4 |
| | | Upstream | -56 |
| | | Upstream | -57 |
Matrix_45 | DRN | Not available | Upstream | -5 |
Matrix_462 | ATERF-8 | Not available | Upstream | -5 |
Matrix_473 | RRTF1 | Not available | Upstream | -3 |
| | | Upstream | -52 |
| | | Upstream | -53 |
Matrix_484 | ATERF13 | Not available | Upstream | -5 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -4 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -4 |
| | | Upstream | -54 |
| | | Upstream | -55 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -4 |
| | | Upstream | -56 |
Matrix_517 | ERF12 | Not available | Upstream | -5 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -4 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -4 |
Matrix_91 | CRF3 | Not available | Upstream | -4 |
Motif_125 | BOXIINTPATPB | Box II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoter | Upstream | -64 |
Motif_309 | GATA promoter motif | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | Upstream | -38 |
| | | Upstream | -62 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -5 |
| | | Upstream | -56 |
Motif_320 | AGCBOXNPGLB | AGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC box | Upstream | -56 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -67 |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -67 |