View conserved binding sites


Gene
AT1G05840
Description
Eukaryotic aspartyl protease family protein
Alias
Not available
Binding siteNameDescriptionLocationPosition
Matrix_110ATABI4;AT3G57600Not availableUpstream-79
Matrix_151ASIL1Not availableUpstream-75
Matrix_190ATERF1Not availableUpstream-79
Matrix_252RAP2.6Not availableUpstream-79
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-78
Matrix_334AT3G23230Not availableUpstream-79
Matrix_426CRF1;CRF2Not availableUpstream-79
Matrix_506DRNL;ATERF-4Not availableUpstream-79
Matrix_517ERF12Not availableUpstream-79
Upstream-81
Upstream-82
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-79
Matrix_91CRF3Not availableUpstream-79
Matrix_99DOF4.7Not availableIntron1042
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-79
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-190
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-190