Matrix_104 | PI | Not available | Upstream | -170 |
Matrix_143 | GATA14;GATA6;GATA5 | Not available | Intron | 151 |
| | | Intron | 149 |
| | | Intron | 108 |
Matrix_195 | GATA2;GATA4 | Not available | Intron | 491 |
Matrix_203 | GATA9;GATA12 | Not available | Intron | 365 |
| | | Intron | 109 |
| | | Upstream | -86 |
| | | Upstream | -87 |
Matrix_356 | PRR5 | Not available | Upstream | -168 |
Matrix_39 | AP1 | Not available | Upstream | -34 |
| | | Upstream | -35 |
Matrix_443 | AGL15 | Not available | Upstream | -169 |
Motif_1 | GT1CORE | Critical for GT-1 binding to box II of rbcS; Transcriptional activation by Arabidopsis GT-1 may be through interaction with TFIIA-TBP-TATA complex | Upstream | -312 |
Motif_125 | BOXIINTPATPB | Box II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoter | Upstream | -100 |
Motif_171 | TCP binding consensus | found enriched in peaks in chip-seq data for SEP3 | Upstream | -27 |
Motif_375 | ERELEE4 | ERE (ethylene responsive element) of tomato E4 and carnation GST1 genes; GST1 is related to senescence; Found in the 5'-LTR region of TLC1.1 retrotransposon family in Lycopersicon chilense; ERE motifs mediate ethylene-induced activation of the U3 promoter region | Upstream | -238 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -97 |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -97 |
Motif_76 | SURE1STPAT21 | Sucrose Responsive Element (SURE); A motif conserved among genes regulated by sucrose; See also SURE2STPAT21; Found between -184 and -156 bp in the patatin (a major tuber protein) gene promoter of potato | Upstream | -98 |