PLAZA 3.0 Dicots : Binding Sites

Gene families associated with a binding site

All is shown and individual cells refer to the target genes (per species).

Binding site: Motif_592
Name: WRKY43;WRKY38;WRKY26
Description: Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function

#Associated genes: 24
#Associated gene families: 16

Click table-header(s) to enable sorting

gene family	#genes (in total)	#associated genes	species	aly	ath	atr	bra	bvu	cla	cme	cpa	cre	cru	csi	egr	fve	gma	gra	lja	mdo	mes	mtr	olu	osa	ppa	ppe	ptr	rco	sly	stu	tca	tpa	vvi	zma
HOM03D000008	3494	2	30	112	110	55	200	46	86	43	80	1	113	87	150	96	278	184	55	235	164	147	0	101	37	104	171	110	118	125	110	108	118	150
HOM03D000011	2954	1	31	85	84	46	174	51	89	86	61	6	87	78	88	74	230	165	61	164	120	138	2	96	69	70	122	70	111	161	77	86	64	139
HOM03D000038	1668	1	31	48	49	27	102	37	37	37	39	1	54	54	75	50	113	85	27	115	71	53	1	53	25	48	70	37	62	79	45	53	47	74
HOM03D000083	1103	5	29	39	37	22	57	22	32	32	33	0	38	29	29	29	75	58	29	51	49	52	0	32	26	37	47	29	40	45	29	33	37	35
HOM03D000107	925	1	31	25	28	21	49	14	25	28	27	2	25	23	30	26	91	43	22	39	35	52	2	38	8	24	39	21	39	36	23	23	23	44
HOM03D000114	828	1	29	29	28	14	45	20	26	26	20	0	28	20	26	17	67	44	15	47	35	33	0	29	18	19	39	23	27	29	21	29	25	29
HOM03D000317	368	1	29	15	15	8	21	8	10	10	10	0	15	11	11	9	24	17	8	16	15	10	0	13	11	10	14	9	10	10	11	13	17	17
HOM03D000318	368	2	31	12	10	7	21	8	10	10	10	4	13	8	16	11	28	17	5	23	11	21	1	14	4	9	13	6	10	15	8	13	9	21
HOM03D000431	292	3	29	11	13	4	16	5	6	5	6	0	13	8	10	7	10	18	5	14	10	10	0	16	10	5	17	10	12	12	9	10	6	14
HOM03D001152	133	1	29	7	7	2	9	3	3	3	3	0	6	3	6	5	8	6	4	6	6	4	0	4	2	3	5	3	4	5	3	6	3	4
HOM03D001356	115	1	31	3	3	2	4	2	3	3	3	1	3	3	4	5	7	7	1	6	5	4	1	4	7	3	6	3	4	4	3	4	3	4
HOM03D001794	93	1	31	3	3	3	4	2	2	2	2	4	3	2	2	2	7	5	2	7	4	3	2	2	5	3	3	2	2	2	2	3	2	3
HOM03D002477	72	1	31	3	3	1	3	2	1	2	1	1	2	2	3	1	4	2	1	3	2	3	1	3	7	2	2	2	3	3	2	3	2	2
HOM03D003193	57	1	29	1	1	1	3	1	2	2	1	0	1	1	1	0	4	5	2	2	3	2	1	2	4	1	2	2	2	2	3	2	2	1
HOM03D004032	47	1	27	2	2	1	4	1	1	1	1	0	2	1	2	1	4	2	2	3	2	2	0	1	0	1	2	1	2	2	1	2	0	1
HOM03D004514	44	1	28	1	1	1	2	1	1	1	1	0	1	1	1	1	2	3	0	3	2	1	0	4	4	1	2	1	2	2	1	1	1	1