PLAZA 3.0 Dicots : Binding Sites

Gene families associated with a binding site

All is shown and individual cells refer to the target genes (per species).

Binding site: Motif_554
Name: AtLHY;AtCCA1
Description: LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms

#Associated genes: 14
#Associated gene families: 10

Click table-header(s) to enable sorting

gene family	#genes (in total)	#associated genes	species	aly	ath	atr	bra	bvu	cla	cme	cpa	cre	cru	csi	egr	fve	gma	gra	lja	mdo	mes	mtr	olu	osa	ppa	ppe	ptr	rco	sly	stu	tca	tpa	vvi	zma
HOM03D000034	1745	1	31	57	51	66	76	35	43	45	36	2	53	56	75	62	118	69	24	63	54	87	3	102	31	68	69	45	73	67	46	46	39	84
HOM03D000048	1511	1	29	17	14	25	22	6	9	12	20	0	30	44	216	26	91	60	19	200	42	153	0	56	7	47	113	30	24	78	77	13	22	38
HOM03D000118	811	1	31	37	24	16	56	17	23	25	19	2	30	21	37	16	54	42	12	55	35	34	1	27	8	22	31	19	28	30	18	22	21	29
HOM03D000142	728	1	31	20	18	14	30	14	21	21	20	14	18	19	22	20	52	32	10	60	30	33	8	30	13	22	33	19	24	23	19	17	21	31
HOM03D000168	607	3	31	21	21	9	36	10	18	18	17	6	24	15	11	13	42	26	12	27	21	39	4	19	11	13	24	19	24	26	18	25	15	23
HOM03D000499	259	3	28	3	5	10	4	7	3	8	5	2	0	3	8	6	12	18	3	1	7	22	0	11	7	0	9	8	34	29	6	4	12	12
HOM03D000682	203	1	31	3	3	3	6	5	4	3	6	1	3	4	17	4	12	10	2	28	7	2	3	7	6	4	13	4	7	9	4	3	8	12
HOM03D000860	166	1	31	3	3	3	4	4	3	4	5	2	3	7	4	7	12	11	2	15	10	6	3	3	3	7	7	5	4	5	6	3	5	7
HOM03D001873	90	1	31	2	2	2	6	1	3	3	2	1	2	2	1	4	5	9	1	10	2	4	1	2	5	3	3	2	3	2	1	2	2	2
HOM03D002389	74	1	31	2	2	3	4	2	2	2	2	1	2	2	2	3	4	4	1	3	3	2	2	2	4	2	3	2	2	4	2	2	2	1