Gene Ontology terms associated with a binding site

Binding site
Motif_99
Name
DREB1A;DREB1C;DREB1B
Description
Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression;Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit
#Associated genes
12
#Associated GO terms
150
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

Click table-header(s) to enable sorting
GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding6 (50.00%)0000020220
GO:0001071nucleic acid binding transcription factor activity4 (33.33%)0000011110
GO:0003700sequence-specific DNA binding transcription factor activity4 (33.33%)0000011110
GO:0003677DNA binding3 (25.00%)0000010110
GO:0035251UDP-glucosyltransferase activity3 (25.00%)0011000100
GO:0008194UDP-glycosyltransferase activity3 (25.00%)0011000100
GO:0003825alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity3 (25.00%)0011000100
GO:0019203carbohydrate phosphatase activity3 (25.00%)0011000100
GO:0003824catalytic activity3 (25.00%)0011000100
GO:0043169cation binding3 (25.00%)0000010110
GO:0046527glucosyltransferase activity3 (25.00%)0011000100
GO:1901363heterocyclic compound binding3 (25.00%)0000010110
GO:0016787hydrolase activity3 (25.00%)0011000100
GO:0016788hydrolase activity, acting on ester bonds3 (25.00%)0011000100
GO:0043167ion binding3 (25.00%)0000010110
GO:0046872metal ion binding3 (25.00%)0000010110
GO:0003676nucleic acid binding3 (25.00%)0000010110
GO:0097159organic cyclic compound binding3 (25.00%)0000010110
GO:0016791phosphatase activity3 (25.00%)0011000100
GO:0042578phosphoric ester hydrolase activity3 (25.00%)0011000100
GO:0005515protein binding3 (25.00%)0000010110
GO:0016740transferase activity3 (25.00%)0011000100
GO:0016757transferase activity, transferring glycosyl groups3 (25.00%)0011000100
GO:0016758transferase activity, transferring hexosyl groups3 (25.00%)0011000100
GO:0046914transition metal ion binding3 (25.00%)0000010110
GO:0004805trehalose-phosphatase activity3 (25.00%)0011000100
GO:0008270zinc ion binding3 (25.00%)0000010110
GO:0003735structural constituent of ribosome2 (16.67%)1000010000
GO:0005198structural molecule activity2 (16.67%)1000010000

Cellular Component (back to top)

Click table-header(s) to enable sorting
GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell10 (83.33%)1001030320
GO:0044464cell part10 (83.33%)1001030320
GO:0005622intracellular10 (83.33%)1001030320
GO:0044424intracellular part7 (58.33%)1001020210
GO:0043229intracellular organelle5 (41.67%)1000020110
GO:0043226organelle5 (41.67%)1000020110
GO:0005737cytoplasm4 (33.33%)1001010100
GO:0044444cytoplasmic part4 (33.33%)1001010100
GO:0043231intracellular membrane-bounded organelle4 (33.33%)1000010110
GO:0043227membrane-bounded organelle4 (33.33%)1000010110
GO:0005634nucleus3 (25.00%)0000010110
GO:0005829cytosol2 (16.67%)0001000100
GO:0043232intracellular non-membrane-bounded organelle2 (16.67%)1000010000
GO:0032991macromolecular complex2 (16.67%)1000010000
GO:0043228non-membrane-bounded organelle2 (16.67%)1000010000
GO:0030529ribonucleoprotein complex2 (16.67%)1000010000
GO:0005840ribosome2 (16.67%)1000010000
GO:0070013intracellular organelle lumen1 (8.33%)1000000000
GO:0044446intracellular organelle part1 (8.33%)1000000000
GO:0015934large ribosomal subunit1 (8.33%)1000000000
GO:0031974membrane-enclosed lumen1 (8.33%)1000000000
GO:0005762mitochondrial large ribosomal subunit1 (8.33%)1000000000
GO:0005759mitochondrial matrix1 (8.33%)1000000000
GO:0044429mitochondrial part1 (8.33%)1000000000
GO:0005761mitochondrial ribosome1 (8.33%)1000000000
GO:0005739mitochondrion1 (8.33%)1000000000
GO:0000315organellar large ribosomal subunit1 (8.33%)1000000000
GO:0000313organellar ribosome1 (8.33%)1000000000
GO:0043233organelle lumen1 (8.33%)1000000000
GO:0044422organelle part1 (8.33%)1000000000
GO:0044391ribosomal subunit1 (8.33%)1000000000

Biological Process (back to top)

Click table-header(s) to enable sorting
GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009058biosynthetic process8 (66.67%)1011020210
GO:0044249cellular biosynthetic process8 (66.67%)1011020210
GO:0044237cellular metabolic process8 (66.67%)1011020210
GO:0009987cellular process8 (66.67%)1011020210
GO:0008152metabolic process8 (66.67%)1011020210
GO:1901576organic substance biosynthetic process8 (66.67%)1011020210
GO:0071704organic substance metabolic process8 (66.67%)1011020210
GO:0044238primary metabolic process8 (66.67%)1011020210
GO:0034645cellular macromolecule biosynthetic process5 (41.67%)1000020110
GO:0044260cellular macromolecule metabolic process5 (41.67%)1000020110
GO:0010467gene expression5 (41.67%)1000020110
GO:0009059macromolecule biosynthetic process5 (41.67%)1000020110
GO:0043170macromolecule metabolic process5 (41.67%)1000020110
GO:0032774RNA biosynthetic process3 (25.00%)0000010110
GO:0016070RNA metabolic process3 (25.00%)0000010110
GO:0019438aromatic compound biosynthetic process3 (25.00%)0000010110
GO:0065007biological regulation3 (25.00%)0000010110
GO:0016051carbohydrate biosynthetic process3 (25.00%)0011000100
GO:0005975carbohydrate metabolic process3 (25.00%)0011000100
GO:0006725cellular aromatic compound metabolic process3 (25.00%)0000010110
GO:0034637cellular carbohydrate biosynthetic process3 (25.00%)0011000100
GO:0044262cellular carbohydrate metabolic process3 (25.00%)0011000100
GO:0044271cellular nitrogen compound biosynthetic process3 (25.00%)0000010110
GO:0034641cellular nitrogen compound metabolic process3 (25.00%)0000010110
GO:0046351disaccharide biosynthetic process3 (25.00%)0011000100
GO:0005984disaccharide metabolic process3 (25.00%)0011000100
GO:0018130heterocycle biosynthetic process3 (25.00%)0000010110
GO:0046483heterocycle metabolic process3 (25.00%)0000010110
GO:0006807nitrogen compound metabolic process3 (25.00%)0000010110
GO:0090304nucleic acid metabolic process3 (25.00%)0000010110
GO:0034654nucleobase-containing compound biosynthetic process3 (25.00%)0000010110
GO:0006139nucleobase-containing compound metabolic process3 (25.00%)0000010110
GO:0009312oligosaccharide biosynthetic process3 (25.00%)0011000100
GO:0009311oligosaccharide metabolic process3 (25.00%)0011000100
GO:1901362organic cyclic compound biosynthetic process3 (25.00%)0000010110
GO:1901360organic cyclic compound metabolic process3 (25.00%)0000010110
GO:0051254positive regulation of RNA metabolic process3 (25.00%)0000010110
GO:0048518positive regulation of biological process3 (25.00%)0000010110
GO:0009891positive regulation of biosynthetic process3 (25.00%)0000010110
GO:0031328positive regulation of cellular biosynthetic process3 (25.00%)0000010110
GO:0031325positive regulation of cellular metabolic process3 (25.00%)0000010110
GO:0048522positive regulation of cellular process3 (25.00%)0000010110
GO:0010628positive regulation of gene expression3 (25.00%)0000010110
GO:0010557positive regulation of macromolecule biosynthetic process3 (25.00%)0000010110
GO:0010604positive regulation of macromolecule metabolic process3 (25.00%)0000010110
GO:0009893positive regulation of metabolic process3 (25.00%)0000010110
GO:0051173positive regulation of nitrogen compound metabolic process3 (25.00%)0000010110
GO:0045935positive regulation of nucleobase-containing compound metabolic process3 (25.00%)0000010110
GO:0045893positive regulation of transcription, DNA-dependent3 (25.00%)0000010110
GO:2001141regulation of RNA biosynthetic process3 (25.00%)0000010110
GO:0051252regulation of RNA metabolic process3 (25.00%)0000010110
GO:0050789regulation of biological process3 (25.00%)0000010110
GO:0009889regulation of biosynthetic process3 (25.00%)0000010110
GO:0031326regulation of cellular biosynthetic process3 (25.00%)0000010110
GO:2000112regulation of cellular macromolecule biosynthetic process3 (25.00%)0000010110
GO:0031323regulation of cellular metabolic process3 (25.00%)0000010110
GO:0050794regulation of cellular process3 (25.00%)0000010110
GO:0010468regulation of gene expression3 (25.00%)0000010110
GO:0010556regulation of macromolecule biosynthetic process3 (25.00%)0000010110
GO:0060255regulation of macromolecule metabolic process3 (25.00%)0000010110
GO:0019222regulation of metabolic process3 (25.00%)0000010110
GO:0051171regulation of nitrogen compound metabolic process3 (25.00%)0000010110
GO:0019219regulation of nucleobase-containing compound metabolic process3 (25.00%)0000010110
GO:0080090regulation of primary metabolic process3 (25.00%)0000010110
GO:0006355regulation of transcription, DNA-dependent3 (25.00%)0000010110
GO:0009628response to abiotic stimulus3 (25.00%)0000010110
GO:0009737response to abscisic acid3 (25.00%)0000010110
GO:0097305response to alcohol3 (25.00%)0000010110
GO:0042221response to chemical3 (25.00%)0000010110
GO:0009719response to endogenous stimulus3 (25.00%)0000010110
GO:0009725response to hormone3 (25.00%)0000010110
GO:0010035response to inorganic substance3 (25.00%)0000010110
GO:0033993response to lipid3 (25.00%)0000010110
GO:0010033response to organic substance3 (25.00%)0000010110
GO:1901700response to oxygen-containing compound3 (25.00%)0000010110
GO:0050896response to stimulus3 (25.00%)0000010110
GO:0006950response to stress3 (25.00%)0000010110
GO:0009415response to water3 (25.00%)0000010110
GO:0009414response to water deprivation3 (25.00%)0000010110
GO:0044711single-organism biosynthetic process3 (25.00%)0011000100
GO:0044723single-organism carbohydrate metabolic process3 (25.00%)0011000100
GO:0044763single-organism cellular process3 (25.00%)0011000100
GO:0044710single-organism metabolic process3 (25.00%)0011000100
GO:0044699single-organism process3 (25.00%)0011000100
GO:0006351transcription, DNA-templated3 (25.00%)0000010110
GO:0005992trehalose biosynthetic process3 (25.00%)0011000100
GO:0005991trehalose metabolic process3 (25.00%)0011000100
GO:0044267cellular protein metabolic process2 (16.67%)1000010000
GO:0019538protein metabolic process2 (16.67%)1000010000
GO:0006412translation2 (16.67%)1000010000