Gene Ontology terms associated with a binding site

Binding site
Motif_93
Name
RGATAOS
Description
R-GATA (GATA motif binding factor) binding site; GATA motif is found at -143 to -135 of RTBV promoter; GATA motif is required for phloem-specific gene expression of Rice Tungro Bacilliform Virus (RTBV); See also RNFG1OS, RNFG2OS, and ABFOS
#Associated genes
155
#Associated GO terms
1039
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell83 (53.55%)6823201484216
GO:0044464cell part83 (53.55%)6823201484216
GO:0005622intracellular74 (47.74%)5823181184213
GO:0044424intracellular part71 (45.81%)5823161174213
GO:0043229intracellular organelle64 (41.29%)572315974210
GO:0043226organelle64 (41.29%)572315974210
GO:0043231intracellular membrane-bounded organelle60 (38.71%)57131577429
GO:0043227membrane-bounded organelle60 (38.71%)57131577429
GO:0005634nucleus41 (26.45%)53031244325
GO:0005737cytoplasm39 (25.16%)1811875206
GO:0044444cytoplasmic part33 (21.29%)1711663206
GO:0016020membrane26 (16.77%)1301772104
GO:0044446intracellular organelle part21 (13.55%)0311363112
GO:0044422organelle part21 (13.55%)0311363112
GO:0071944cell periphery14 (9.03%)1101340103
GO:0016021integral to membrane11 (7.10%)0000432002
GO:0031224intrinsic to membrane11 (7.10%)0000432002
GO:0044425membrane part11 (7.10%)0000432002
GO:0005886plasma membrane11 (7.10%)1100240003
GO:0043232intracellular non-membrane-bounded organelle10 (6.45%)0110221111
GO:0043228non-membrane-bounded organelle10 (6.45%)0110221111
GO:0009536plastid10 (6.45%)0201330100
GO:0009507chloroplast9 (5.81%)0101330100
GO:0032991macromolecular complex9 (5.81%)0111022002
GO:0043234protein complex9 (5.81%)0111022002
GO:0005773vacuole9 (5.81%)0201021102
GO:0005829cytosol8 (5.16%)0200120102
GO:0030054cell junction7 (4.52%)1200211000
GO:0005911cell-cell junction7 (4.52%)1200211000
GO:0070013intracellular organelle lumen7 (4.52%)0101200111
GO:0031974membrane-enclosed lumen7 (4.52%)0101200111
GO:0005739mitochondrion7 (4.52%)1101021100
GO:0043233organelle lumen7 (4.52%)0101200111
GO:0009506plasmodesma7 (4.52%)1200211000
GO:0055044symplast7 (4.52%)1200211000
GO:0044430cytoskeletal part6 (3.87%)0110021001
GO:0005856cytoskeleton6 (3.87%)0110021001
GO:0044428nuclear part6 (3.87%)0000211110
GO:0044434chloroplast part5 (3.23%)0001130000
GO:0005783endoplasmic reticulum5 (3.23%)0200010002
GO:0005871kinesin complex5 (3.23%)0110011001
GO:0005875microtubule associated complex5 (3.23%)0110011001
GO:0015630microtubule cytoskeleton5 (3.23%)0110011001
GO:0031090organelle membrane5 (3.23%)0101011100
GO:0044435plastid part5 (3.23%)0001130000
GO:0031981nuclear lumen4 (2.58%)0000200110
GO:0005774vacuolar membrane4 (2.58%)0101010100
GO:0044437vacuolar part4 (2.58%)0101010100
GO:1902494catalytic complex3 (1.94%)0001001001
GO:0009570chloroplast stroma3 (1.94%)0001020000
GO:0031975envelope3 (1.94%)0001200000
GO:0030312external encapsulating structure3 (1.94%)0001100100
GO:0005576extracellular region3 (1.94%)0001110000
GO:0009532plastid stroma3 (1.94%)0001020000
GO:0000151ubiquitin ligase complex3 (1.94%)0001001001
GO:0005794Golgi apparatus2 (1.29%)0010100000
GO:0048046apoplast2 (1.29%)0001010000
GO:0005618cell wall2 (1.29%)0001000100
GO:0009941chloroplast envelope2 (1.29%)0001100000
GO:0000785chromatin2 (1.29%)0000200000
GO:0044427chromosomal part2 (1.29%)0000200000
GO:0005694chromosome2 (1.29%)0000200000
GO:0031461cullin-RING ubiquitin ligase complex2 (1.29%)0001001000
GO:0005788endoplasmic reticulum lumen2 (1.29%)0100000001
GO:0044432endoplasmic reticulum part2 (1.29%)0100000001
GO:0000791euchromatin2 (1.29%)0000200000
GO:0000792heterochromatin2 (1.29%)0000200000
GO:0042579microbody2 (1.29%)0100001000
GO:0000790nuclear chromatin2 (1.29%)0000200000
GO:0000228nuclear chromosome2 (1.29%)0000200000
GO:0044454nuclear chromosome part2 (1.29%)0000200000
GO:0005720nuclear heterochromatin2 (1.29%)0000200000
GO:0005730nucleolus2 (1.29%)0000000110
GO:0031967organelle envelope2 (1.29%)0001100000
GO:0005777peroxisome2 (1.29%)0100001000
GO:0009526plastid envelope2 (1.29%)0001100000
GO:0009579thylakoid2 (1.29%)0001100000
GO:0005802trans-Golgi network2 (1.29%)0010100000
GO:0019005SCF ubiquitin ligase complex1 (0.65%)0001000000
GO:0015629actin cytoskeleton1 (0.65%)0000010000
GO:0005884actin filament1 (0.65%)0000010000
GO:0005680anaphase-promoting complex1 (0.65%)0000001000
GO:0030313cell envelope1 (0.65%)0000100000
GO:0009534chloroplast thylakoid1 (0.65%)0000100000
GO:0009535chloroplast thylakoid membrane1 (0.65%)0000100000
GO:0016023cytoplasmic membrane-bounded vesicle1 (0.65%)0000100000
GO:0031410cytoplasmic vesicle1 (0.65%)0000100000
GO:0044462external encapsulating structure part1 (0.65%)0000100000
GO:0031301integral to organelle membrane1 (0.65%)0000001000
GO:0005779integral to peroxisomal membrane1 (0.65%)0000001000
GO:0031300intrinsic to organelle membrane1 (0.65%)0000001000
GO:0031231intrinsic to peroxisomal membrane1 (0.65%)0000001000
GO:0031988membrane-bounded vesicle1 (0.65%)0000100000
GO:0031903microbody membrane1 (0.65%)0000001000
GO:0044438microbody part1 (0.65%)0000001000
GO:0005759mitochondrial matrix1 (0.65%)0001000000
GO:0044429mitochondrial part1 (0.65%)0001000000
GO:0000152nuclear ubiquitin ligase complex1 (0.65%)0000001000
GO:0031984organelle subcompartment1 (0.65%)0000100000
GO:0030288outer membrane-bounded periplasmic space1 (0.65%)0000100000
GO:0042597periplasmic space1 (0.65%)0000100000
GO:0005778peroxisomal membrane1 (0.65%)0000001000
GO:0044439peroxisomal part1 (0.65%)0000001000
GO:0034357photosynthetic membrane1 (0.65%)0000100000
GO:0031976plastid thylakoid1 (0.65%)0000100000
GO:0055035plastid thylakoid membrane1 (0.65%)0000100000
GO:0010287plastoglobule1 (0.65%)0000010000
GO:0031977thylakoid lumen1 (0.65%)0000100000
GO:0042651thylakoid membrane1 (0.65%)0000100000
GO:0044436thylakoid part1 (0.65%)0000100000
GO:0031982vesicle1 (0.65%)0000100000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding107 (69.03%)312610251975218
GO:0005515protein binding58 (37.42%)393710852110
GO:1901363heterocyclic compound binding56 (36.13%)143419125215
GO:0097159organic cyclic compound binding56 (36.13%)143419125215
GO:0003824catalytic activity49 (31.61%)06401595109
GO:0043167ion binding42 (27.10%)03431473206
GO:0003676nucleic acid binding32 (20.65%)12231063113
GO:0003677DNA binding25 (16.13%)1202942113
GO:0043168anion binding24 (15.48%)02111052102
GO:1901265nucleoside phosphate binding23 (14.84%)02111052101
GO:0000166nucleotide binding23 (14.84%)02111052101
GO:0036094small molecule binding23 (14.84%)02111052101
GO:0097367carbohydrate derivative binding22 (14.19%)02111052001
GO:0001882nucleoside binding22 (14.19%)02111052001
GO:0001883purine nucleoside binding22 (14.19%)02111052001
GO:0017076purine nucleotide binding22 (14.19%)02111052001
GO:0032550purine ribonucleoside binding22 (14.19%)02111052001
GO:0035639purine ribonucleoside triphosphate binding22 (14.19%)02111052001
GO:0032555purine ribonucleotide binding22 (14.19%)02111052001
GO:0032549ribonucleoside binding22 (14.19%)02111052001
GO:0032553ribonucleotide binding22 (14.19%)02111052001
GO:0005524ATP binding21 (13.55%)02111042001
GO:0030554adenyl nucleotide binding21 (13.55%)02111042001
GO:0032559adenyl ribonucleotide binding21 (13.55%)02111042001
GO:0043169cation binding21 (13.55%)0133621104
GO:0016787hydrolase activity21 (13.55%)0430632003
GO:0046872metal ion binding21 (13.55%)0133621104
GO:0016740transferase activity18 (11.61%)0100843002
GO:0001071nucleic acid binding transcription factor activity14 (9.03%)1102322102
GO:0003700sequence-specific DNA binding transcription factor activity14 (9.03%)1102322102
GO:0046914transition metal ion binding14 (9.03%)0121511003
GO:0016773phosphotransferase activity, alcohol group as acceptor13 (8.39%)0000732001
GO:0046983protein dimerization activity13 (8.39%)2102311102
GO:0016772transferase activity, transferring phosphorus-containing groups13 (8.39%)0000732001
GO:0016301kinase activity11 (7.10%)0000731000
GO:0004672protein kinase activity11 (7.10%)0000731000
GO:0008270zinc ion binding11 (7.10%)0021501002
GO:0042802identical protein binding10 (6.45%)1101111112
GO:0016817hydrolase activity, acting on acid anhydrides9 (5.81%)0110321001
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides9 (5.81%)0110321001
GO:0017111nucleoside-triphosphatase activity9 (5.81%)0110321001
GO:0042803protein homodimerization activity9 (5.81%)1101111102
GO:0004674protein serine/threonine kinase activity9 (5.81%)0000531000
GO:0016462pyrophosphatase activity9 (5.81%)0110321001
GO:0043565sequence-specific DNA binding8 (5.16%)0001301003
GO:0003682chromatin binding6 (3.87%)0000140001
GO:0008092cytoskeletal protein binding5 (3.23%)0110011001
GO:0008017microtubule binding5 (3.23%)0110011001
GO:0003777microtubule motor activity5 (3.23%)0110011001
GO:0003774motor activity5 (3.23%)0110011001
GO:0016491oxidoreductase activity5 (3.23%)0100110101
GO:0008233peptidase activity5 (3.23%)0020210000
GO:0070011peptidase activity, acting on L-amino acid peptides5 (3.23%)0020210000
GO:0032403protein complex binding5 (3.23%)0110011001
GO:0015631tubulin binding5 (3.23%)0110011001
GO:0016887ATPase activity4 (2.58%)0000310000
GO:0004175endopeptidase activity4 (2.58%)0020200000
GO:0016798hydrolase activity, acting on glycosyl bonds4 (2.58%)0100001002
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds3 (1.94%)0000001002
GO:0004872receptor activity3 (1.94%)0100100001
GO:0005215transporter activity3 (1.94%)0000200001
GO:0003935GTP cyclohydrolase II activity2 (1.29%)0000200000
GO:0003933GTP cyclohydrolase activity2 (1.29%)0000200000
GO:0003723RNA binding2 (1.29%)0000020000
GO:0004561alpha-N-acetylglucosaminidase activity2 (1.29%)0000001001
GO:0004190aspartic-type endopeptidase activity2 (1.29%)0020000000
GO:0070001aspartic-type peptidase activity2 (1.29%)0020000000
GO:0010011auxin binding2 (1.29%)0100000001
GO:0030246carbohydrate binding2 (1.29%)0100010000
GO:0005507copper ion binding2 (1.29%)0100010000
GO:0019238cyclohydrolase activity2 (1.29%)0000200000
GO:0008144drug binding2 (1.29%)0000001001
GO:0020037heme binding2 (1.29%)0000010001
GO:0015929hexosaminidase activity2 (1.29%)0000001001
GO:0042393histone binding2 (1.29%)0000200000
GO:0042562hormone binding2 (1.29%)0100000001
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2 (1.29%)0000200000
GO:0016814hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines2 (1.29%)0000200000
GO:0016788hydrolase activity, acting on ester bonds2 (1.29%)0100100000
GO:0015075ion transmembrane transporter activity2 (1.29%)0000100001
GO:0016874ligase activity2 (1.29%)0010000001
GO:0008289lipid binding2 (1.29%)0000000002
GO:0004222metalloendopeptidase activity2 (1.29%)0000200000
GO:0008237metallopeptidase activity2 (1.29%)0000200000
GO:0035064methylated histone residue binding2 (1.29%)0000200000
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2 (1.29%)0000000101
GO:0046982protein heterodimerization activity2 (1.29%)0000011000
GO:0022891substrate-specific transmembrane transporter activity2 (1.29%)0000100001
GO:0022892substrate-specific transporter activity2 (1.29%)0000100001
GO:0046906tetrapyrrole binding2 (1.29%)0000010001
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups2 (1.29%)0100000001
GO:0022857transmembrane transporter activity2 (1.29%)0000100001
GO:0009824AMP dimethylallyltransferase activity1 (0.65%)0100000000
GO:0008026ATP-dependent helicase activity1 (0.65%)0000100000
GO:0042623ATPase activity, coupled1 (0.65%)0000100000
GO:0005525GTP binding1 (0.65%)0000010000
GO:0003924GTPase activity1 (0.65%)0000010000
GO:0004499N,N-dimethylaniline monooxygenase activity1 (0.65%)0000000100
GO:0050661NADP binding1 (0.65%)0000000100
GO:0035251UDP-glucosyltransferase activity1 (0.65%)0000100000
GO:0008194UDP-glycosyltransferase activity1 (0.65%)0000100000
GO:0016881acid-amino acid ligase activity1 (0.65%)0000000001
GO:0022804active transmembrane transporter activity1 (0.65%)0000000001
GO:0003825alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity1 (0.65%)0000100000
GO:0004812aminoacyl-tRNA ligase activity1 (0.65%)0010000000
GO:0008509anion transmembrane transporter activity1 (0.65%)0000000001
GO:0015301anion:anion antiporter activity1 (0.65%)0000000001
GO:0016209antioxidant activity1 (0.65%)0000010000
GO:0015297antiporter activity1 (0.65%)0000000001
GO:0005509calcium ion binding1 (0.65%)0010000000
GO:0019203carbohydrate phosphatase activity1 (0.65%)0000100000
GO:0015267channel activity1 (0.65%)0000100000
GO:0031490chromatin DNA binding1 (0.65%)0000100000
GO:0050662coenzyme binding1 (0.65%)0000000100
GO:0048037cofactor binding1 (0.65%)0000000100
GO:0008234cysteine-type peptidase activity1 (0.65%)0000010000
GO:0032451demethylase activity1 (0.65%)0000100000
GO:0004161dimethylallyltranstransferase activity1 (0.65%)0000000001
GO:0009055electron carrier activity1 (0.65%)0000010000
GO:0030234enzyme regulator activity1 (0.65%)0100000000
GO:0005231excitatory extracellular ligand-gated ion channel activity1 (0.65%)0000100000
GO:0005230extracellular ligand-gated ion channel activity1 (0.65%)0000100000
GO:0005234extracellular-glutamate-gated ion channel activity1 (0.65%)0000100000
GO:0004311farnesyltranstransferase activity1 (0.65%)0000000001
GO:0050660flavin adenine dinucleotide binding1 (0.65%)0000000100
GO:0022836gated channel activity1 (0.65%)0000100000
GO:0004337geranyltranstransferase activity1 (0.65%)0000000001
GO:0046527glucosyltransferase activity1 (0.65%)0000100000
GO:0008066glutamate receptor activity1 (0.65%)0000100000
GO:0019001guanyl nucleotide binding1 (0.65%)0000010000
GO:0032561guanyl ribonucleotide binding1 (0.65%)0000010000
GO:0004386helicase activity1 (0.65%)0000100000
GO:0032452histone demethylase activity1 (0.65%)0000100000
GO:0032454histone demethylase activity (H3-K9 specific)1 (0.65%)0000100000
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds1 (0.65%)0100000000
GO:0005452inorganic anion exchanger activity1 (0.65%)0000000001
GO:0005216ion channel activity1 (0.65%)0000100000
GO:0022839ion gated channel activity1 (0.65%)0000100000
GO:0004970ionotropic glutamate receptor activity1 (0.65%)0000100000
GO:0005506iron ion binding1 (0.65%)0000000001
GO:0022834ligand-gated channel activity1 (0.65%)0000100000
GO:0015276ligand-gated ion channel activity1 (0.65%)0000100000
GO:0016876ligase activity, forming aminoacyl-tRNA and related compounds1 (0.65%)0010000000
GO:0016879ligase activity, forming carbon-nitrogen bonds1 (0.65%)0000000001
GO:0016875ligase activity, forming carbon-oxygen bonds1 (0.65%)0010000000
GO:0008168methyltransferase activity1 (0.65%)0000010000
GO:0060089molecular transducer activity1 (0.65%)0000100000
GO:0004497monooxygenase activity1 (0.65%)0000000100
GO:0016614oxidoreductase activity, acting on CH-OH group of donors1 (0.65%)0000100000
GO:0016709oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1 (0.65%)0000000100
GO:0016684oxidoreductase activity, acting on peroxide as acceptor1 (0.65%)0000010000
GO:0016645oxidoreductase activity, acting on the CH-NH group of donors1 (0.65%)0100000000
GO:0016647oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor1 (0.65%)0100000000
GO:0022803passive transmembrane transporter activity1 (0.65%)0000100000
GO:0004601peroxidase activity1 (0.65%)0000010000
GO:0016791phosphatase activity1 (0.65%)0000100000
GO:0005543phospholipid binding1 (0.65%)0000000001
GO:0042578phosphoric ester hydrolase activity1 (0.65%)0000100000
GO:0046592polyamine oxidase activity1 (0.65%)0100000000
GO:0004659prenyltransferase activity1 (0.65%)0000000001
GO:0070035purine NTP-dependent helicase activity1 (0.65%)0000100000
GO:0015291secondary active transmembrane transporter activity1 (0.65%)0000000001
GO:0004871signal transducer activity1 (0.65%)0000100000
GO:0038023signaling receptor activity1 (0.65%)0000100000
GO:0019787small conjugating protein ligase activity1 (0.65%)0000000001
GO:0043566structure-specific DNA binding1 (0.65%)0000100000
GO:0022838substrate-specific channel activity1 (0.65%)0000100000
GO:0016746transferase activity, transferring acyl groups1 (0.65%)0000001000
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups1 (0.65%)0000001000
GO:0016757transferase activity, transferring glycosyl groups1 (0.65%)0000100000
GO:0016758transferase activity, transferring hexosyl groups1 (0.65%)0000100000
GO:0016741transferase activity, transferring one-carbon groups1 (0.65%)0000010000
GO:0008135translation factor activity, nucleic acid binding1 (0.65%)0000010000
GO:0003747translation release factor activity1 (0.65%)0000010000
GO:0016149translation release factor activity, codon specific1 (0.65%)0000010000
GO:0008079translation termination factor activity1 (0.65%)0000010000
GO:0004888transmembrane signaling receptor activity1 (0.65%)0000100000
GO:0004805trehalose-phosphatase activity1 (0.65%)0000100000
GO:0004842ubiquitin-protein ligase activity1 (0.65%)0000000001
GO:0051082unfolded protein binding1 (0.65%)0001000000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process74 (47.74%)3112520964212
GO:0008152metabolic process71 (45.81%)11135211053210
GO:0071704organic substance metabolic process65 (41.94%)110352084329
GO:0044237cellular metabolic process62 (40.00%)111151975328
GO:0044238primary metabolic process61 (39.35%)18252084229
GO:0044699single-organism process56 (36.13%)372410954210
GO:0043170macromolecule metabolic process54 (34.84%)16351974117
GO:0044260cellular macromolecule metabolic process50 (32.26%)16151864117
GO:0065007biological regulation45 (29.03%)37151263305
GO:0050789regulation of biological process43 (27.74%)35151263305
GO:0044763single-organism cellular process43 (27.74%)2612775427
GO:0009058biosynthetic process38 (24.52%)17031133316
GO:0044249cellular biosynthetic process38 (24.52%)17031133316
GO:0050794regulation of cellular process38 (24.52%)33041253305
GO:0006807nitrogen compound metabolic process36 (23.23%)18031033215
GO:1901576organic substance biosynthetic process36 (23.23%)15031133316
GO:0050896response to stimulus36 (23.23%)11059103313
GO:0034641cellular nitrogen compound metabolic process34 (21.94%)16031033215
GO:0048856anatomical structure development33 (21.29%)3312743325
GO:0006725cellular aromatic compound metabolic process33 (21.29%)15031033215
GO:0032502developmental process33 (21.29%)3312743325
GO:0046483heterocycle metabolic process33 (21.29%)15031033215
GO:0044767single-organism developmental process33 (21.29%)3312743325
GO:1901360organic cyclic compound metabolic process32 (20.65%)14031033215
GO:0007275multicellular organismal development31 (20.00%)3212743324
GO:0032501multicellular organismal process31 (20.00%)3212743324
GO:0006139nucleobase-containing compound metabolic process31 (20.00%)14031033115
GO:0044707single-multicellular organism process31 (20.00%)3212743324
GO:0034645cellular macromolecule biosynthetic process30 (19.35%)14031033105
GO:0009059macromolecule biosynthetic process30 (19.35%)14031033105
GO:0090304nucleic acid metabolic process30 (19.35%)14031023115
GO:0019222regulation of metabolic process29 (18.71%)14031123104
GO:0044271cellular nitrogen compound biosynthetic process28 (18.06%)13031023204
GO:0010467gene expression28 (18.06%)13031033104
GO:0031323regulation of cellular metabolic process28 (18.06%)13031123104
GO:0048731system development28 (18.06%)3212732314
GO:0016070RNA metabolic process27 (17.42%)13031023104
GO:0019438aromatic compound biosynthetic process27 (17.42%)12031023204
GO:0018130heterocycle biosynthetic process27 (17.42%)12031023204
GO:1901362organic cyclic compound biosynthetic process27 (17.42%)12031023204
GO:0009889regulation of biosynthetic process27 (17.42%)13031023104
GO:0031326regulation of cellular biosynthetic process27 (17.42%)13031023104
GO:2000112regulation of cellular macromolecule biosynthetic process27 (17.42%)13031023104
GO:0010556regulation of macromolecule biosynthetic process27 (17.42%)13031023104
GO:0060255regulation of macromolecule metabolic process27 (17.42%)13031023104
GO:0051171regulation of nitrogen compound metabolic process27 (17.42%)13031023104
GO:0019219regulation of nucleobase-containing compound metabolic process27 (17.42%)13031023104
GO:0080090regulation of primary metabolic process27 (17.42%)13031023104
GO:0032774RNA biosynthetic process26 (16.77%)12031023104
GO:0034654nucleobase-containing compound biosynthetic process26 (16.77%)12031023104
GO:0006351transcription, DNA-templated26 (16.77%)12031023104
GO:2001141regulation of RNA biosynthetic process25 (16.13%)12031023103
GO:0051252regulation of RNA metabolic process25 (16.13%)12031023103
GO:0010468regulation of gene expression25 (16.13%)12031023103
GO:0006355regulation of transcription, DNA-dependent25 (16.13%)12031023103
GO:0019538protein metabolic process23 (14.84%)01221051002
GO:0000003reproduction22 (14.19%)1101731323
GO:0009628response to abiotic stimulus22 (14.19%)1103641213
GO:0044710single-organism metabolic process22 (14.19%)0700421323
GO:0003006developmental process involved in reproduction21 (13.55%)1101731313
GO:0022414reproductive process21 (13.55%)1101731313
GO:0048608reproductive structure development21 (13.55%)1101731313
GO:0061458reproductive system development21 (13.55%)1101731313
GO:0044702single organism reproductive process21 (13.55%)1101731313
GO:0009791post-embryonic development20 (12.90%)1101731204
GO:0044267cellular protein metabolic process19 (12.26%)0102941002
GO:0042221response to chemical17 (10.97%)0103353200
GO:0048367shoot system development16 (10.32%)1201511104
GO:0010033response to organic substance15 (9.68%)0102343200
GO:0009314response to radiation15 (9.68%)1001521113
GO:0016043cellular component organization14 (9.03%)1100522111
GO:0071840cellular component organization or biogenesis14 (9.03%)1100522111
GO:0009908flower development14 (9.03%)1101511103
GO:0006796phosphate-containing compound metabolic process14 (9.03%)0100741001
GO:0006793phosphorus metabolic process14 (9.03%)0100741001
GO:0009416response to light stimulus14 (9.03%)1001521103
GO:0006464cellular protein modification process13 (8.39%)0000831001
GO:0043412macromolecule modification13 (8.39%)0000831001
GO:0048513organ development13 (8.39%)2012222002
GO:0036211protein modification process13 (8.39%)0000831001
GO:0050793regulation of developmental process13 (8.39%)1110412102
GO:0051716cellular response to stimulus12 (7.74%)1001212311
GO:2000026regulation of multicellular organismal development12 (7.74%)1110412101
GO:0051239regulation of multicellular organismal process12 (7.74%)1110412101
GO:0009719response to endogenous stimulus12 (7.74%)0102233100
GO:0009725response to hormone12 (7.74%)0102233100
GO:0016310phosphorylation11 (7.10%)0000731000
GO:0048518positive regulation of biological process11 (7.10%)2101220102
GO:0006468protein phosphorylation11 (7.10%)0000731000
GO:0006950response to stress11 (7.10%)0102330110
GO:0009653anatomical structure morphogenesis10 (6.45%)1210201003
GO:0048519negative regulation of biological process10 (6.45%)0001511101
GO:0009648photoperiodism10 (6.45%)1001410102
GO:0048831regulation of shoot system development10 (6.45%)1100411101
GO:0007154cell communication9 (5.81%)1001112201
GO:0048523negative regulation of cellular process9 (5.81%)0001501101
GO:0006996organelle organization9 (5.81%)1000512000
GO:0009909regulation of flower development9 (5.81%)1000411101
GO:0048580regulation of post-embryonic development9 (5.81%)1000411101
GO:2000241regulation of reproductive process9 (5.81%)1000411101
GO:0007165signal transduction9 (5.81%)1001112201
GO:0023052signaling9 (5.81%)1001112201
GO:0044700single organism signaling9 (5.81%)1001112201
GO:0048869cellular developmental process8 (5.16%)1100003003
GO:0010154fruit development8 (5.16%)0100220210
GO:0051179localization8 (5.16%)0112210001
GO:0055114oxidation-reduction process8 (5.16%)0200211101
GO:0048573photoperiodism, flowering8 (5.16%)1000410101
GO:0048364root development8 (5.16%)1010221001
GO:0022622root system development8 (5.16%)1010221001
GO:0044711single-organism biosynthetic process8 (5.16%)0200100212
GO:0009888tissue development8 (5.16%)1010022002
GO:0010228vegetative to reproductive phase transition of meristem8 (5.16%)1000410101
GO:0009056catabolic process7 (4.52%)0211110001
GO:0051234establishment of localization7 (4.52%)0102210001
GO:0040007growth7 (4.52%)0210201001
GO:1901564organonitrogen compound metabolic process7 (4.52%)0500010100
GO:0006508proteolysis7 (4.52%)0021210001
GO:0065008regulation of biological quality7 (4.52%)1300010101
GO:0009733response to auxin7 (4.52%)0001231000
GO:1901700response to oxygen-containing compound7 (4.52%)0101022100
GO:0006810transport7 (4.52%)0102210001
GO:0030154cell differentiation6 (3.87%)1000003002
GO:0044248cellular catabolic process6 (3.87%)0111110001
GO:0070887cellular response to chemical stimulus6 (3.87%)0001102200
GO:0071310cellular response to organic substance6 (3.87%)0001102200
GO:0048229gametophyte development6 (3.87%)0000311010
GO:0051704multi-organism process6 (3.87%)0101021100
GO:0031324negative regulation of cellular metabolic process6 (3.87%)0000500100
GO:0009892negative regulation of metabolic process6 (3.87%)0000500100
GO:1901575organic substance catabolic process6 (3.87%)0201110001
GO:0009639response to red or far red light6 (3.87%)1000111101
GO:0009266response to temperature stimulus6 (3.87%)0102300000
GO:0048511rhythmic process6 (3.87%)1001100102
GO:0048316seed development6 (3.87%)0100220100
GO:0016049cell growth5 (3.23%)0200200001
GO:0006928cellular component movement5 (3.23%)0110011001
GO:0007623circadian rhythm5 (3.23%)1001100101
GO:0007018microtubule-based movement5 (3.23%)0110011001
GO:0007017microtubule-based process5 (3.23%)0110011001
GO:0051253negative regulation of RNA metabolic process5 (3.23%)0000400100
GO:0009890negative regulation of biosynthetic process5 (3.23%)0000400100
GO:0031327negative regulation of cellular biosynthetic process5 (3.23%)0000400100
GO:2000113negative regulation of cellular macromolecule biosynthetic process5 (3.23%)0000400100
GO:0051093negative regulation of developmental process5 (3.23%)0000301001
GO:0010629negative regulation of gene expression5 (3.23%)0000400100
GO:0010558negative regulation of macromolecule biosynthetic process5 (3.23%)0000400100
GO:0010605negative regulation of macromolecule metabolic process5 (3.23%)0000400100
GO:0051172negative regulation of nitrogen compound metabolic process5 (3.23%)0000400100
GO:0045934negative regulation of nucleobase-containing compound metabolic process5 (3.23%)0000400100
GO:0045892negative regulation of transcription, DNA-dependent5 (3.23%)0000400100
GO:0009555pollen development5 (3.23%)0000310010
GO:0042753positive regulation of circadian rhythm5 (3.23%)1001100101
GO:0042752regulation of circadian rhythm5 (3.23%)1001100101
GO:0009607response to biotic stimulus5 (3.23%)0101021000
GO:0009605response to external stimulus5 (3.23%)1000100102
GO:0080167response to karrikin5 (3.23%)1000110101
GO:0051707response to other organism5 (3.23%)0101021000
GO:0010114response to red light5 (3.23%)1000110101
GO:0006259DNA metabolic process4 (2.58%)0100100011
GO:0007049cell cycle4 (2.58%)0100000012
GO:0044255cellular lipid metabolic process4 (2.58%)0100000111
GO:0071214cellular response to abiotic stimulus4 (2.58%)1000100101
GO:0071495cellular response to endogenous stimulus4 (2.58%)0001002100
GO:0032870cellular response to hormone stimulus4 (2.58%)0001002100
GO:0071482cellular response to light stimulus4 (2.58%)1000100101
GO:0071478cellular response to radiation4 (2.58%)1000100101
GO:0071489cellular response to red or far red light4 (2.58%)1000100101
GO:0048589developmental growth4 (2.58%)0110001001
GO:0009649entrainment of circadian clock4 (2.58%)1000100101
GO:0009913epidermal cell differentiation4 (2.58%)1000001002
GO:0008544epidermis development4 (2.58%)1000001002
GO:0030855epithelial cell differentiation4 (2.58%)1000001002
GO:0060429epithelium development4 (2.58%)1000001002
GO:0016458gene silencing4 (2.58%)0000300100
GO:0009755hormone-mediated signaling pathway4 (2.58%)0001002100
GO:0006629lipid metabolic process4 (2.58%)0100000111
GO:0033036macromolecule localization4 (2.58%)0111010000
GO:0048522positive regulation of cellular process4 (2.58%)1100010001
GO:0008104protein localization4 (2.58%)0111010000
GO:0010017red or far-red light signaling pathway4 (2.58%)1000100101
GO:0090066regulation of anatomical structure size4 (2.58%)1100010001
GO:0032535regulation of cellular component size4 (2.58%)1100010001
GO:0040029regulation of gene expression, epigenetic4 (2.58%)0000300100
GO:0009409response to cold4 (2.58%)0101200000
GO:0010035response to inorganic substance4 (2.58%)0101010100
GO:0033993response to lipid4 (2.58%)0001002100
GO:0014070response to organic cyclic compound4 (2.58%)0000110200
GO:0010016shoot system morphogenesis4 (2.58%)0100200001
GO:0043588skin development4 (2.58%)1000001002
GO:0006396RNA processing3 (1.94%)0100100100
GO:0007568aging3 (1.94%)0001000110
GO:0009308amine metabolic process3 (1.94%)0300000000
GO:1901135carbohydrate derivative metabolic process3 (1.94%)0200010000
GO:0005975carbohydrate metabolic process3 (1.94%)0100100001
GO:0022402cell cycle process3 (1.94%)0100000011
GO:0048468cell development3 (1.94%)1000001001
GO:0000902cell morphogenesis3 (1.94%)1100000001
GO:0071554cell wall organization or biogenesis3 (1.94%)0010000110
GO:0032989cellular component morphogenesis3 (1.94%)1100000001
GO:0034754cellular hormone metabolic process3 (1.94%)0200000100
GO:0051641cellular localization3 (1.94%)0101010000
GO:0044265cellular macromolecule catabolic process3 (1.94%)0001100001
GO:0070727cellular macromolecule localization3 (1.94%)0101010000
GO:0048610cellular process involved in reproduction3 (1.94%)0000000120
GO:0044257cellular protein catabolic process3 (1.94%)0001100001
GO:0034613cellular protein localization3 (1.94%)0101010000
GO:0071407cellular response to organic cyclic compound3 (1.94%)0000100200
GO:0006325chromatin organization3 (1.94%)0000300000
GO:0006342chromatin silencing3 (1.94%)0000300000
GO:0051276chromosome organization3 (1.94%)0000300000
GO:0006952defense response3 (1.94%)0100020000
GO:0021700developmental maturation3 (1.94%)0000000111
GO:0009790embryo development3 (1.94%)0100200000
GO:0009793embryo development ending in seed dormancy3 (1.94%)0100200000
GO:0051649establishment of localization in cell3 (1.94%)0101010000
GO:0045184establishment of protein localization3 (1.94%)0101010000
GO:0006091generation of precursor metabolites and energy3 (1.94%)0100101000
GO:0042446hormone biosynthetic process3 (1.94%)0200000100
GO:0042445hormone metabolic process3 (1.94%)0200000100
GO:0006886intracellular protein transport3 (1.94%)0101010000
GO:0046907intracellular transport3 (1.94%)0101010000
GO:0008299isoprenoid biosynthetic process3 (1.94%)0000000111
GO:0006720isoprenoid metabolic process3 (1.94%)0000000111
GO:0008610lipid biosynthetic process3 (1.94%)0000000111
GO:0043933macromolecular complex subunit organization3 (1.94%)1000020000
GO:0009057macromolecule catabolic process3 (1.94%)0001100001
GO:0048507meristem development3 (1.94%)0010002000
GO:0032504multicellular organism reproduction3 (1.94%)0000000210
GO:0045814negative regulation of gene expression, epigenetic3 (1.94%)0000300000
GO:0051241negative regulation of multicellular organismal process3 (1.94%)0000300000
GO:0048581negative regulation of post-embryonic development3 (1.94%)0000300000
GO:0048585negative regulation of response to stimulus3 (1.94%)0001110000
GO:0071702organic substance transport3 (1.94%)0101010000
GO:0019637organophosphate metabolic process3 (1.94%)0100010001
GO:0007389pattern specification process3 (1.94%)0010001100
GO:0030163protein catabolic process3 (1.94%)0001100001
GO:0071822protein complex subunit organization3 (1.94%)1000020000
GO:0015031protein transport3 (1.94%)0101010000
GO:0003002regionalization3 (1.94%)0010001100
GO:0010817regulation of hormone levels3 (1.94%)0200000100
GO:0048509regulation of meristem development3 (1.94%)0010002000
GO:0065009regulation of molecular function3 (1.94%)0100200000
GO:0048583regulation of response to stimulus3 (1.94%)0001110000
GO:0010119regulation of stomatal movement3 (1.94%)0000030000
GO:0097305response to alcohol3 (1.94%)0001001100
GO:0009408response to heat3 (1.94%)0002100000
GO:0006970response to osmotic stress3 (1.94%)0101010000
GO:0009651response to salt stress3 (1.94%)0101010000
GO:0044765single-organism transport3 (1.94%)0002000001
GO:0044281small molecule metabolic process3 (1.94%)0100010100
GO:0010118stomatal movement3 (1.94%)0000030000
GO:0016114terpenoid biosynthetic process3 (1.94%)0000000111
GO:0006721terpenoid metabolic process3 (1.94%)0000000111
GO:0042023DNA endoreduplication2 (1.29%)0100000001
GO:0006260DNA replication2 (1.29%)0100000001
GO:0006261DNA-dependent DNA replication2 (1.29%)0100000001
GO:0030036actin cytoskeleton organization2 (1.29%)1000010000
GO:0007015actin filament organization2 (1.29%)1000010000
GO:0030041actin filament polymerization2 (1.29%)1000010000
GO:0030029actin filament-based process2 (1.29%)1000010000
GO:0045010actin nucleation2 (1.29%)1000010000
GO:0008154actin polymerization or depolymerization2 (1.29%)1000010000
GO:0009060aerobic respiration2 (1.29%)0100001000
GO:0043450alkene biosynthetic process2 (1.29%)0000000110
GO:0071695anatomical structure maturation2 (1.29%)0000000110
GO:0022610biological adhesion2 (1.29%)1100000000
GO:0016051carbohydrate biosynthetic process2 (1.29%)0100100000
GO:1901136carbohydrate derivative catabolic process2 (1.29%)0100010000
GO:0019752carboxylic acid metabolic process2 (1.29%)0100000100
GO:0072358cardiovascular system development2 (1.29%)0000020000
GO:0016117carotenoid biosynthetic process2 (1.29%)0000000110
GO:0016116carotenoid metabolic process2 (1.29%)0000000110
GO:0007155cell adhesion2 (1.29%)1100000000
GO:0044786cell cycle DNA replication2 (1.29%)0100000001
GO:0051301cell division2 (1.29%)0100000001
GO:0042545cell wall modification2 (1.29%)0000000110
GO:0009829cell wall modification involved in fruit ripening2 (1.29%)0000000110
GO:0071555cell wall organization2 (1.29%)0000000110
GO:0043449cellular alkene metabolic process2 (1.29%)0000000110
GO:0034637cellular carbohydrate biosynthetic process2 (1.29%)0100100000
GO:0044262cellular carbohydrate metabolic process2 (1.29%)0100100000
GO:0022607cellular component assembly2 (1.29%)1000010000
GO:0044085cellular component biogenesis2 (1.29%)1000010000
GO:0034622cellular macromolecular complex assembly2 (1.29%)1000010000
GO:0022412cellular process involved in reproduction in multicellular organism2 (1.29%)0000000110
GO:0043623cellular protein complex assembly2 (1.29%)1000010000
GO:0045333cellular respiration2 (1.29%)0100001000
GO:0071359cellular response to dsRNA2 (1.29%)0000100100
GO:0071396cellular response to lipid2 (1.29%)0000001100
GO:1901699cellular response to nitrogen compound2 (1.29%)0000100100
GO:1901701cellular response to oxygen-containing compound2 (1.29%)0000001100
GO:0072359circulatory system development2 (1.29%)0000020000
GO:0000910cytokinesis2 (1.29%)0100000001
GO:0009691cytokinin biosynthetic process2 (1.29%)0200000000
GO:0009690cytokinin metabolic process2 (1.29%)0200000000
GO:0016482cytoplasmic transport2 (1.29%)0001010000
GO:0007010cytoskeleton organization2 (1.29%)1000010000
GO:0098542defense response to other organism2 (1.29%)0000020000
GO:0060560developmental growth involved in morphogenesis2 (1.29%)0100000001
GO:0031050dsRNA fragmentation2 (1.29%)0000100100
GO:0009553embryo sac development2 (1.29%)0000001010
GO:0015980energy derivation by oxidation of organic compounds2 (1.29%)0100001000
GO:0009693ethylene biosynthetic process2 (1.29%)0000000110
GO:0009692ethylene metabolic process2 (1.29%)0000000110
GO:0045229external encapsulating structure organization2 (1.29%)0000000110
GO:0048437floral organ development2 (1.29%)0001000001
GO:0048438floral whorl development2 (1.29%)0001000001
GO:0009835fruit ripening2 (1.29%)0000000110
GO:0009836fruit ripening, climacteric2 (1.29%)0000000110
GO:0031047gene silencing by RNA2 (1.29%)0000100100
GO:1901658glycosyl compound catabolic process2 (1.29%)0100010000
GO:1901657glycosyl compound metabolic process2 (1.29%)0100010000
GO:0048467gynoecium development2 (1.29%)0001000001
GO:0006811ion transport2 (1.29%)0001000001
GO:0065003macromolecular complex assembly2 (1.29%)1000010000
GO:0035266meristem growth2 (1.29%)0010001000
GO:0010073meristem maintenance2 (1.29%)0010001000
GO:0043632modification-dependent macromolecule catabolic process2 (1.29%)0001000001
GO:0019941modification-dependent protein catabolic process2 (1.29%)0001000001
GO:0009825multidimensional cell growth2 (1.29%)0000200000
GO:0045596negative regulation of cell differentiation2 (1.29%)0000001001
GO:0009910negative regulation of flower development2 (1.29%)0000200000
GO:0044092negative regulation of molecular function2 (1.29%)0000200000
GO:0045857negative regulation of molecular function, epigenetic2 (1.29%)0000200000
GO:2000242negative regulation of reproductive process2 (1.29%)0000200000
GO:1900674olefin biosynthetic process2 (1.29%)0000000110
GO:1900673olefin metabolic process2 (1.29%)0000000110
GO:0006082organic acid metabolic process2 (1.29%)0100000100
GO:1901566organonitrogen compound biosynthetic process2 (1.29%)0100000100
GO:1901565organonitrogen compound catabolic process2 (1.29%)0100010000
GO:0043436oxoacid metabolic process2 (1.29%)0100000100
GO:0010087phloem or xylem histogenesis2 (1.29%)0000020000
GO:0006644phospholipid metabolic process2 (1.29%)0100000001
GO:0048827phyllome development2 (1.29%)0001100000
GO:0046148pigment biosynthetic process2 (1.29%)0000000110
GO:0042440pigment metabolic process2 (1.29%)0000000110
GO:0009827plant-type cell wall modification2 (1.29%)0000000110
GO:0009664plant-type cell wall organization2 (1.29%)0000000110
GO:0071669plant-type cell wall organization or biogenesis2 (1.29%)0000000110
GO:0009657plastid organization2 (1.29%)0000200000
GO:0032877positive regulation of DNA endoreduplication2 (1.29%)0100000001
GO:0051054positive regulation of DNA metabolic process2 (1.29%)0100000001
GO:0045740positive regulation of DNA replication2 (1.29%)0100000001
GO:2000105positive regulation of DNA-dependent DNA replication2 (1.29%)0100000001
GO:0030838positive regulation of actin filament polymerization2 (1.29%)1000010000
GO:0009891positive regulation of biosynthetic process2 (1.29%)0100000001
GO:0090068positive regulation of cell cycle process2 (1.29%)0100000001
GO:0051781positive regulation of cell division2 (1.29%)0100000001
GO:0045793positive regulation of cell size2 (1.29%)0100000001
GO:0031328positive regulation of cellular biosynthetic process2 (1.29%)0100000001
GO:0051130positive regulation of cellular component organization2 (1.29%)1000010000
GO:0031325positive regulation of cellular metabolic process2 (1.29%)0100000001
GO:0051495positive regulation of cytoskeleton organization2 (1.29%)1000010000
GO:0051094positive regulation of developmental process2 (1.29%)0000110000
GO:0010557positive regulation of macromolecule biosynthetic process2 (1.29%)0100000001
GO:0010604positive regulation of macromolecule metabolic process2 (1.29%)0100000001
GO:0009893positive regulation of metabolic process2 (1.29%)0100000001
GO:0051240positive regulation of multicellular organismal process2 (1.29%)0000110000
GO:0051173positive regulation of nitrogen compound metabolic process2 (1.29%)0100000001
GO:0045935positive regulation of nucleobase-containing compound metabolic process2 (1.29%)0100000001
GO:0010638positive regulation of organelle organization2 (1.29%)1000010000
GO:0048582positive regulation of post-embryonic development2 (1.29%)0000110000
GO:0031334positive regulation of protein complex assembly2 (1.29%)1000010000
GO:0032273positive regulation of protein polymerization2 (1.29%)1000010000
GO:0048569post-embryonic organ development2 (1.29%)0001000001
GO:0070918production of small RNA involved in gene silencing by RNA2 (1.29%)0000100100
GO:0046777protein autophosphorylation2 (1.29%)0000020000
GO:0006461protein complex assembly2 (1.29%)1000010000
GO:0070271protein complex biogenesis2 (1.29%)1000010000
GO:0006457protein folding2 (1.29%)0101000000
GO:0051258protein polymerization2 (1.29%)1000010000
GO:0051603proteolysis involved in cellular protein catabolic process2 (1.29%)0001000001
GO:0032875regulation of DNA endoreduplication2 (1.29%)0100000001
GO:0051052regulation of DNA metabolic process2 (1.29%)0100000001
GO:0006275regulation of DNA replication2 (1.29%)0100000001
GO:0090329regulation of DNA-dependent DNA replication2 (1.29%)0100000001
GO:0032956regulation of actin cytoskeleton organization2 (1.29%)1000010000
GO:0030832regulation of actin filament length2 (1.29%)1000010000
GO:0030833regulation of actin filament polymerization2 (1.29%)1000010000
GO:0032970regulation of actin filament-based process2 (1.29%)1000010000
GO:0008064regulation of actin polymerization or depolymerization2 (1.29%)1000010000
GO:0051726regulation of cell cycle2 (1.29%)0100000001
GO:0010564regulation of cell cycle process2 (1.29%)0100000001
GO:0045595regulation of cell differentiation2 (1.29%)0000001001
GO:0051302regulation of cell division2 (1.29%)0100000001
GO:0008361regulation of cell size2 (1.29%)0100000001
GO:0044087regulation of cellular component biogenesis2 (1.29%)1000010000
GO:0051128regulation of cellular component organization2 (1.29%)1000010000
GO:0051493regulation of cytoskeleton organization2 (1.29%)1000010000
GO:0048638regulation of developmental growth2 (1.29%)0010001000
GO:0040008regulation of growth2 (1.29%)0010001000
GO:0010075regulation of meristem growth2 (1.29%)0010001000
GO:0040030regulation of molecular function, epigenetic2 (1.29%)0000200000
GO:0033043regulation of organelle organization2 (1.29%)1000010000
GO:0043254regulation of protein complex assembly2 (1.29%)1000010000
GO:0032271regulation of protein polymerization2 (1.29%)1000010000
GO:0009737response to abscisic acid2 (1.29%)0001001000
GO:0043331response to dsRNA2 (1.29%)0000100100
GO:0009620response to fungus2 (1.29%)0000011000
GO:0010038response to metal ion2 (1.29%)0101000000
GO:1901698response to nitrogen compound2 (1.29%)0000100100
GO:0009415response to water2 (1.29%)0000010100
GO:0009414response to water deprivation2 (1.29%)0000010100
GO:0010015root morphogenesis2 (1.29%)0010000001
GO:0010214seed coat development2 (1.29%)0000020000
GO:0044723single-organism carbohydrate metabolic process2 (1.29%)0100100000
GO:0044712single-organism catabolic process2 (1.29%)0100010000
GO:0016109tetraterpenoid biosynthetic process2 (1.29%)0000000110
GO:0016108tetraterpenoid metabolic process2 (1.29%)0000000110
GO:0010026trichome differentiation2 (1.29%)1000001000
GO:0006511ubiquitin-dependent protein catabolic process2 (1.29%)0001000001
GO:0009826unidimensional cell growth2 (1.29%)0100000001
GO:0001944vasculature development2 (1.29%)0000020000
GO:0010048vernalization response2 (1.29%)0000200000
GO:0010089xylem development2 (1.29%)0000020000
GO:0006305DNA alkylation1 (0.65%)0000100000
GO:0009294DNA mediated transformation1 (0.65%)0000000100
GO:0006306DNA methylation1 (0.65%)0000100000
GO:0032776DNA methylation on cytosine1 (0.65%)0000100000
GO:0044728DNA methylation or demethylation1 (0.65%)0000100000
GO:0006304DNA modification1 (0.65%)0000100000
GO:0006281DNA repair1 (0.65%)0000000010
GO:0006505GPI anchor metabolic process1 (0.65%)0100000000
GO:0006184GTP catabolic process1 (0.65%)0000010000
GO:0046039GTP metabolic process1 (0.65%)0000010000
GO:0010304PSII associated light-harvesting complex II catabolic process1 (0.65%)0000100000
GO:0016246RNA interference1 (0.65%)0000000100
GO:0080188RNA-directed DNA methylation1 (0.65%)0000100000
GO:0016145S-glycoside catabolic process1 (0.65%)0100000000
GO:0016143S-glycoside metabolic process1 (0.65%)0100000000
GO:0009943adaxial/abaxial axis specification1 (0.65%)0000000100
GO:0009955adaxial/abaxial pattern specification1 (0.65%)0000000100
GO:1901605alpha-amino acid metabolic process1 (0.65%)0100000000
GO:0009310amine catabolic process1 (0.65%)0100000000
GO:0048646anatomical structure formation involved in morphogenesis1 (0.65%)0100000000
GO:0006820anion transport1 (0.65%)0000000001
GO:0051211anisotropic cell growth1 (0.65%)0100000000
GO:0043481anthocyanin accumulation in tissues in response to UV light1 (0.65%)0000000001
GO:0019439aromatic compound catabolic process1 (0.65%)0000010000
GO:0009851auxin biosynthetic process1 (0.65%)0000000100
GO:0009734auxin mediated signaling pathway1 (0.65%)0000001000
GO:0060774auxin mediated signaling pathway involved in phyllotactic patterning1 (0.65%)0000001000
GO:0009850auxin metabolic process1 (0.65%)0000000100
GO:0009798axis specification1 (0.65%)0000000100
GO:0051274beta-glucan biosynthetic process1 (0.65%)0100000000
GO:0051273beta-glucan metabolic process1 (0.65%)0100000000
GO:0009742brassinosteroid mediated signaling pathway1 (0.65%)0000000100
GO:0046394carboxylic acid biosynthetic process1 (0.65%)0000000100
GO:0048440carpel development1 (0.65%)0001000000
GO:0006812cation transport1 (0.65%)0001000000
GO:0048469cell maturation1 (0.65%)0000000001
GO:0000904cell morphogenesis involved in differentiation1 (0.65%)1000000000
GO:0016998cell wall macromolecule catabolic process1 (0.65%)0010000000
GO:0044036cell wall macromolecule metabolic process1 (0.65%)0010000000
GO:0044106cellular amine metabolic process1 (0.65%)0100000000
GO:0006520cellular amino acid metabolic process1 (0.65%)0100000000
GO:0042402cellular biogenic amine catabolic process1 (0.65%)0100000000
GO:0006576cellular biogenic amine metabolic process1 (0.65%)0100000000
GO:0022411cellular component disassembly1 (0.65%)0000010000
GO:0006073cellular glucan metabolic process1 (0.65%)0100000000
GO:0044270cellular nitrogen compound catabolic process1 (0.65%)0000010000
GO:0033692cellular polysaccharide biosynthetic process1 (0.65%)0100000000
GO:0044264cellular polysaccharide metabolic process1 (0.65%)0100000000
GO:0043624cellular protein complex disassembly1 (0.65%)0000010000
GO:0006974cellular response to DNA damage stimulus1 (0.65%)0000000010
GO:0097306cellular response to alcohol1 (0.65%)0000000100
GO:0071365cellular response to auxin stimulus1 (0.65%)0000001000
GO:0071367cellular response to brassinosteroid stimulus1 (0.65%)0000000100
GO:0071368cellular response to cytokinin stimulus1 (0.65%)0000001000
GO:0071369cellular response to ethylene stimulus1 (0.65%)0001000000
GO:0071370cellular response to gibberellin stimulus1 (0.65%)0000001000
GO:0071383cellular response to steroid hormone stimulus1 (0.65%)0000000100
GO:0033554cellular response to stress1 (0.65%)0000000010
GO:0030244cellulose biosynthetic process1 (0.65%)0100000000
GO:0030243cellulose metabolic process1 (0.65%)0100000000
GO:0009658chloroplast organization1 (0.65%)0000100000
GO:0016568chromatin modification1 (0.65%)0000100000
GO:0031048chromatin silencing by small RNA1 (0.65%)0000100000
GO:0016569covalent chromatin modification1 (0.65%)0000100000
GO:0042335cuticle development1 (0.65%)0000000001
GO:0009736cytokinin-activated signaling pathway1 (0.65%)0000001000
GO:0042742defense response to bacterium1 (0.65%)0000010000
GO:0050832defense response to fungus1 (0.65%)0000010000
GO:0070988demethylation1 (0.65%)0000100000
GO:0009582detection of abiotic stimulus1 (0.65%)1000000000
GO:0009581detection of external stimulus1 (0.65%)1000000000
GO:0009583detection of light stimulus1 (0.65%)1000000000
GO:0051606detection of stimulus1 (0.65%)1000000000
GO:0046351disaccharide biosynthetic process1 (0.65%)0000100000
GO:0005984disaccharide metabolic process1 (0.65%)0000100000
GO:0022611dormancy process1 (0.65%)0000000100
GO:0006302double-strand break repair1 (0.65%)0000000010
GO:0022900electron transport chain1 (0.65%)0000100000
GO:0009559embryo sac central cell differentiation1 (0.65%)0000001000
GO:0072596establishment of protein localization to chloroplast1 (0.65%)0001000000
GO:0072594establishment of protein localization to organelle1 (0.65%)0001000000
GO:0009873ethylene mediated signaling pathway1 (0.65%)0001000000
GO:0045337farnesyl diphosphate biosynthetic process1 (0.65%)0000000001
GO:0045338farnesyl diphosphate metabolic process1 (0.65%)0000000001
GO:0010451floral meristem growth1 (0.65%)0000001000
GO:0009292genetic transfer1 (0.65%)0000000100
GO:0009740gibberellic acid mediated signaling pathway1 (0.65%)0000001000
GO:0010476gibberellin mediated signaling pathway1 (0.65%)0000001000
GO:0009250glucan biosynthetic process1 (0.65%)0100000000
GO:0044042glucan metabolic process1 (0.65%)0100000000
GO:0019762glucosinolate catabolic process1 (0.65%)0100000000
GO:0019760glucosinolate metabolic process1 (0.65%)0100000000
GO:0009064glutamine family amino acid metabolic process1 (0.65%)0100000000
GO:0006541glutamine metabolic process1 (0.65%)0100000000
GO:0046486glycerolipid metabolic process1 (0.65%)0100000000
GO:0006650glycerophospholipid metabolic process1 (0.65%)0100000000
GO:0006664glycolipid metabolic process1 (0.65%)0100000000
GO:0019759glycosinolate catabolic process1 (0.65%)0100000000
GO:0019757glycosinolate metabolic process1 (0.65%)0100000000
GO:1990064ground tissue pattern formation1 (0.65%)0010000000
GO:1901069guanosine-containing compound catabolic process1 (0.65%)0000010000
GO:1901068guanosine-containing compound metabolic process1 (0.65%)0000010000
GO:0010052guard cell differentiation1 (0.65%)0000000001
GO:0010286heat acclimation1 (0.65%)0001000000
GO:0046700heterocycle catabolic process1 (0.65%)0000010000
GO:0033169histone H3-K9 demethylation1 (0.65%)0000100000
GO:0016577histone demethylation1 (0.65%)0000100000
GO:0070076histone lysine demethylation1 (0.65%)0000100000
GO:0016570histone modification1 (0.65%)0000100000
GO:0042435indole-containing compound biosynthetic process1 (0.65%)0000000100
GO:0042430indole-containing compound metabolic process1 (0.65%)0000000100
GO:0009684indoleacetic acid biosynthetic process1 (0.65%)0000000100
GO:0009683indoleacetic acid metabolic process1 (0.65%)0000000100
GO:0010229inflorescence development1 (0.65%)0000100000
GO:0035556intracellular signal transduction1 (0.65%)0000010000
GO:0000741karyogamy1 (0.65%)0000001000
GO:0048366leaf development1 (0.65%)0000100000
GO:0060772leaf phyllotactic patterning1 (0.65%)0000001000
GO:0048571long-day photoperiodism1 (0.65%)0000100000
GO:0048574long-day photoperiodism, flowering1 (0.65%)0000100000
GO:0009299mRNA transcription1 (0.65%)0000000001
GO:0032984macromolecular complex disassembly1 (0.65%)0000010000
GO:0043414macromolecule methylation1 (0.65%)0000100000
GO:0048497maintenance of floral organ identity1 (0.65%)0000000001
GO:0010074maintenance of meristem identity1 (0.65%)0000001000
GO:0048496maintenance of organ identity1 (0.65%)0000000001
GO:0010492maintenance of shoot apical meristem identity1 (0.65%)0000001000
GO:0009561megagametogenesis1 (0.65%)0000001000
GO:0007126meiosis1 (0.65%)0000000010
GO:0051321meiotic cell cycle1 (0.65%)0000000010
GO:0006643membrane lipid metabolic process1 (0.65%)0100000000
GO:0061024membrane organization1 (0.65%)0000100000
GO:0030001metal ion transport1 (0.65%)0001000000
GO:0032259methylation1 (0.65%)0000100000
GO:0072330monocarboxylic acid biosynthetic process1 (0.65%)0000000100
GO:0032787monocarboxylic acid metabolic process1 (0.65%)0000000100
GO:0001763morphogenesis of a branching structure1 (0.65%)0100000000
GO:0044764multi-organism cellular process1 (0.65%)0000000100
GO:0048609multicellular organismal reproductive process1 (0.65%)0000000100
GO:0034660ncRNA metabolic process1 (0.65%)0100000000
GO:0034470ncRNA processing1 (0.65%)0100000000
GO:0010648negative regulation of cell communication1 (0.65%)0001000000
GO:0031348negative regulation of defense response1 (0.65%)0000010000
GO:1900425negative regulation of defense response to bacterium1 (0.65%)0000010000
GO:0010105negative regulation of ethylene mediated signaling pathway1 (0.65%)0001000000
GO:0048579negative regulation of long-day photoperiodism, flowering1 (0.65%)0000100000
GO:0043901negative regulation of multi-organism process1 (0.65%)0000010000
GO:0070298negative regulation of phosphorelay signal transduction system1 (0.65%)0001000000
GO:0043155negative regulation of photosynthesis, light reaction1 (0.65%)0000100000
GO:0002832negative regulation of response to biotic stimulus1 (0.65%)0000010000
GO:0009968negative regulation of signal transduction1 (0.65%)0001000000
GO:0023057negative regulation of signaling1 (0.65%)0001000000
GO:0080028nitrile biosynthetic process1 (0.65%)0100000000
GO:0050898nitrile metabolic process1 (0.65%)0100000000
GO:0051169nuclear transport1 (0.65%)0000010000
GO:0034655nucleobase-containing compound catabolic process1 (0.65%)0000010000
GO:0055086nucleobase-containing small molecule metabolic process1 (0.65%)0000010000
GO:0006913nucleocytoplasmic transport1 (0.65%)0000010000
GO:0009164nucleoside catabolic process1 (0.65%)0000010000
GO:0009116nucleoside metabolic process1 (0.65%)0000010000
GO:1901292nucleoside phosphate catabolic process1 (0.65%)0000010000
GO:0006753nucleoside phosphate metabolic process1 (0.65%)0000010000
GO:0009143nucleoside triphosphate catabolic process1 (0.65%)0000010000
GO:0009141nucleoside triphosphate metabolic process1 (0.65%)0000010000
GO:0009166nucleotide catabolic process1 (0.65%)0000010000
GO:0009117nucleotide metabolic process1 (0.65%)0000010000
GO:0006997nucleus organization1 (0.65%)0000001000
GO:0009312oligosaccharide biosynthetic process1 (0.65%)0000100000
GO:0009311oligosaccharide metabolic process1 (0.65%)0000100000
GO:0035265organ growth1 (0.65%)0000001000
GO:0009887organ morphogenesis1 (0.65%)0000001000
GO:0010260organ senescence1 (0.65%)0001000000
GO:0048284organelle fusion1 (0.65%)0000001000
GO:0016053organic acid biosynthetic process1 (0.65%)0000000100
GO:1901361organic cyclic compound catabolic process1 (0.65%)0000010000
GO:0090407organophosphate biosynthetic process1 (0.65%)0000000001
GO:0046434organophosphate catabolic process1 (0.65%)0000010000
GO:0048481ovule development1 (0.65%)0001000000
GO:0007031peroxisome organization1 (0.65%)0000001000
GO:0046488phosphatidylinositol metabolic process1 (0.65%)0100000000
GO:0008654phospholipid biosynthetic process1 (0.65%)0000000001
GO:0000160phosphorelay signal transduction system1 (0.65%)0001000000
GO:0010205photoinhibition1 (0.65%)0000100000
GO:0015979photosynthesis1 (0.65%)0000100000
GO:0009765photosynthesis, light harvesting1 (0.65%)0000100000
GO:0019684photosynthesis, light reaction1 (0.65%)0000100000
GO:0009767photosynthetic electron transport chain1 (0.65%)0000100000
GO:0010206photosystem II repair1 (0.65%)0000100000
GO:0007602phototransduction1 (0.65%)1000000000
GO:0060771phyllotactic patterning1 (0.65%)0000001000
GO:0043476pigment accumulation1 (0.65%)0000000001
GO:0043478pigment accumulation in response to UV light1 (0.65%)0000000001
GO:0043480pigment accumulation in tissues1 (0.65%)0000000001
GO:0043479pigment accumulation in tissues in response to UV light1 (0.65%)0000000001
GO:0043473pigmentation1 (0.65%)0000000001
GO:0035670plant-type ovary development1 (0.65%)0001000000
GO:0009668plastid membrane organization1 (0.65%)0000100000
GO:0010197polar nucleus fusion1 (0.65%)0000001000
GO:0009944polarity specification of adaxial/abaxial axis1 (0.65%)0000000100
GO:0006598polyamine catabolic process1 (0.65%)0100000000
GO:0006595polyamine metabolic process1 (0.65%)0100000000
GO:0000271polysaccharide biosynthetic process1 (0.65%)0100000000
GO:0005976polysaccharide metabolic process1 (0.65%)0100000000
GO:0009911positive regulation of flower development1 (0.65%)0000010000
GO:2000243positive regulation of reproductive process1 (0.65%)0000010000
GO:0048584positive regulation of response to stimulus1 (0.65%)0000100000
GO:0048576positive regulation of short-day photoperiodism, flowering1 (0.65%)0000100000
GO:0009886post-embryonic morphogenesis1 (0.65%)0000000001
GO:0016441posttranscriptional gene silencing1 (0.65%)0000000100
GO:0035194posttranscriptional gene silencing by RNA1 (0.65%)0000000100
GO:0010608posttranscriptional regulation of gene expression1 (0.65%)0000000100
GO:0030422production of siRNA involved in RNA interference1 (0.65%)0000000100
GO:0070919production of siRNA involved in chromatin silencing by small RNA1 (0.65%)0000100000
GO:0043241protein complex disassembly1 (0.65%)0000010000
GO:0008214protein dealkylation1 (0.65%)0000100000
GO:0006482protein demethylation1 (0.65%)0000100000
GO:0072598protein localization to chloroplast1 (0.65%)0001000000
GO:0033365protein localization to organelle1 (0.65%)0001000000
GO:0032446protein modification by small protein conjugation1 (0.65%)0000000001
GO:0070647protein modification by small protein conjugation or removal1 (0.65%)0000000001
GO:0030091protein repair1 (0.65%)0000100000
GO:0006605protein targeting1 (0.65%)0001000000
GO:0045036protein targeting to chloroplast1 (0.65%)0001000000
GO:0016567protein ubiquitination1 (0.65%)0000000001
GO:0006152purine nucleoside catabolic process1 (0.65%)0000010000
GO:0042278purine nucleoside metabolic process1 (0.65%)0000010000
GO:0009146purine nucleoside triphosphate catabolic process1 (0.65%)0000010000
GO:0009144purine nucleoside triphosphate metabolic process1 (0.65%)0000010000
GO:0006195purine nucleotide catabolic process1 (0.65%)0000010000
GO:0006163purine nucleotide metabolic process1 (0.65%)0000010000
GO:0046130purine ribonucleoside catabolic process1 (0.65%)0000010000
GO:0046128purine ribonucleoside metabolic process1 (0.65%)0000010000
GO:0009207purine ribonucleoside triphosphate catabolic process1 (0.65%)0000010000
GO:0009205purine ribonucleoside triphosphate metabolic process1 (0.65%)0000010000
GO:0009154purine ribonucleotide catabolic process1 (0.65%)0000010000
GO:0009150purine ribonucleotide metabolic process1 (0.65%)0000010000
GO:0072523purine-containing compound catabolic process1 (0.65%)0000010000
GO:0072521purine-containing compound metabolic process1 (0.65%)0000010000
GO:0009956radial pattern formation1 (0.65%)0000001000
GO:0072593reactive oxygen species metabolic process1 (0.65%)0000100000
GO:0009585red, far-red light phototransduction1 (0.65%)1000000000
GO:0022603regulation of anatomical structure morphogenesis1 (0.65%)0100000000
GO:0050790regulation of catalytic activity1 (0.65%)0100000000
GO:0010646regulation of cell communication1 (0.65%)0001000000
GO:0031347regulation of defense response1 (0.65%)0000010000
GO:1900424regulation of defense response to bacterium1 (0.65%)0000010000
GO:0040034regulation of development, heterochronic1 (0.65%)0000001000
GO:0010104regulation of ethylene mediated signaling pathway1 (0.65%)0001000000
GO:0010080regulation of floral meristem growth1 (0.65%)0000001000
GO:0043467regulation of generation of precursor metabolites and energy1 (0.65%)0000100000
GO:0051336regulation of hydrolase activity1 (0.65%)0100000000
GO:0048586regulation of long-day photoperiodism, flowering1 (0.65%)0000100000
GO:0060688regulation of morphogenesis of a branching structure1 (0.65%)0100000000
GO:0043900regulation of multi-organism process1 (0.65%)0000010000
GO:0070297regulation of phosphorelay signal transduction system1 (0.65%)0001000000
GO:2000028regulation of photoperiodism, flowering1 (0.65%)0000100000
GO:0010109regulation of photosynthesis1 (0.65%)0000100000
GO:0042548regulation of photosynthesis, light reaction1 (0.65%)0000100000
GO:0002831regulation of response to biotic stimulus1 (0.65%)0000010000
GO:0080134regulation of response to stress1 (0.65%)0000010000
GO:2000280regulation of root development1 (0.65%)0010000000
GO:0010082regulation of root meristem growth1 (0.65%)0010000000
GO:2000032regulation of secondary shoot formation1 (0.65%)0100000000
GO:1900618regulation of shoot system morphogenesis1 (0.65%)0100000000
GO:0048587regulation of short-day photoperiodism, flowering1 (0.65%)0000100000
GO:0009966regulation of signal transduction1 (0.65%)0001000000
GO:0023051regulation of signaling1 (0.65%)0001000000
GO:0090333regulation of stomatal closure1 (0.65%)0000010000
GO:0048506regulation of timing of meristematic phase transition1 (0.65%)0000001000
GO:0048510regulation of timing of transition from vegetative to reproductive phase1 (0.65%)0000001000
GO:0009411response to UV1 (0.65%)0000000001
GO:0009617response to bacterium1 (0.65%)0000010000
GO:0009741response to brassinosteroid1 (0.65%)0000000100
GO:0046686response to cadmium ion1 (0.65%)0001000000
GO:0010201response to continuous far red light stimulus by the high-irradiance response system1 (0.65%)0000001000
GO:0009735response to cytokinin1 (0.65%)0000001000
GO:0009723response to ethylene1 (0.65%)0001000000
GO:0010218response to far red light1 (0.65%)0000001000
GO:0009739response to gibberellin stimulus1 (0.65%)0000001000
GO:0080027response to herbivore1 (0.65%)0100000000
GO:0009644response to high light intensity1 (0.65%)0000100000
GO:0010212response to ionizing radiation1 (0.65%)0000000010
GO:0009753response to jasmonic acid1 (0.65%)0100000000
GO:0009642response to light intensity1 (0.65%)0000100000
GO:0006979response to oxidative stress1 (0.65%)0000010000
GO:0009751response to salicylic acid1 (0.65%)0000010000
GO:0048545response to steroid hormone1 (0.65%)0000000100
GO:0009608response to symbiont1 (0.65%)0000001000
GO:0009610response to symbiotic fungus1 (0.65%)0000001000
GO:0009615response to virus1 (0.65%)0001000000
GO:0009611response to wounding1 (0.65%)0100000000
GO:0010043response to zinc ion1 (0.65%)0100000000
GO:0042454ribonucleoside catabolic process1 (0.65%)0000010000
GO:0009119ribonucleoside metabolic process1 (0.65%)0000010000
GO:0009203ribonucleoside triphosphate catabolic process1 (0.65%)0000010000
GO:0009199ribonucleoside triphosphate metabolic process1 (0.65%)0000010000
GO:0009261ribonucleotide catabolic process1 (0.65%)0000010000
GO:0009259ribonucleotide metabolic process1 (0.65%)0000010000
GO:0019693ribose phosphate metabolic process1 (0.65%)0000010000
GO:0010053root epidermal cell differentiation1 (0.65%)0000000001
GO:0048765root hair cell differentiation1 (0.65%)0000000001
GO:0010449root meristem growth1 (0.65%)0010000000
GO:0019748secondary metabolic process1 (0.65%)0100000000
GO:0010223secondary shoot formation1 (0.65%)0100000000
GO:0010162seed dormancy process1 (0.65%)0000000100
GO:0010431seed maturation1 (0.65%)0000000100
GO:0010346shoot axis formation1 (0.65%)0100000000
GO:0048572short-day photoperiodism1 (0.65%)0000100000
GO:0048575short-day photoperiodism, flowering1 (0.65%)0000100000
GO:0044802single-organism membrane organization1 (0.65%)0000100000
GO:0007264small GTPase mediated signal transduction1 (0.65%)0000010000
GO:0044283small molecule biosynthetic process1 (0.65%)0000000100
GO:0065001specification of axis polarity1 (0.65%)0000000100
GO:0048864stem cell development1 (0.65%)0000001000
GO:0048863stem cell differentiation1 (0.65%)0000001000
GO:0019827stem cell maintenance1 (0.65%)0000001000
GO:0043401steroid hormone mediated signaling pathway1 (0.65%)0000000100
GO:0090332stomatal closure1 (0.65%)0000010000
GO:0010374stomatal complex development1 (0.65%)0000000001
GO:0010103stomatal complex morphogenesis1 (0.65%)0000000001
GO:0044273sulfur compound catabolic process1 (0.65%)0100000000
GO:0006790sulfur compound metabolic process1 (0.65%)0100000000
GO:0006399tRNA metabolic process1 (0.65%)0100000000
GO:0008033tRNA processing1 (0.65%)0100000000
GO:0010027thylakoid membrane organization1 (0.65%)0000100000
GO:0006412translation1 (0.65%)0000010000
GO:0006415translational termination1 (0.65%)0000010000
GO:0005992trehalose biosynthetic process1 (0.65%)0000100000
GO:0005991trehalose metabolic process1 (0.65%)0000100000
GO:0010054trichoblast differentiation1 (0.65%)0000000001
GO:0048764trichoblast maturation1 (0.65%)0000000001
GO:0010090trichome morphogenesis1 (0.65%)1000000000