PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_91
Name: SORLIP4AT
Description: one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data

#Associated genes: 86
#Associated MapMan terms: 70

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	24 (27.91%)	1	1	5	5	4	6	1	1
27.3	RNA.regulation of transcription	12 (13.95%)	1	0	3	3	2	2	1	0
27.1	RNA.processing	10 (11.63%)	0	1	2	2	2	2	0	1
28	DNA	7 (8.14%)	0	0	0	3	1	3	0	0
19	tetrapyrrole synthesis	5 (5.81%)	0	0	0	2	1	1	0	1
19.40	tetrapyrrole synthesis.regulation	5 (5.81%)	0	0	0	2	1	1	0	1
29	protein	5 (5.81%)	1	0	0	1	0	0	0	3
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	4 (4.65%)	0	0	0	3	0	1	0	0
30	signalling	4 (4.65%)	0	0	2	0	1	0	0	1
16	secondary metabolism	3 (3.49%)	0	0	0	0	0	1	1	1
16.1	secondary metabolism.isoprenoids	3 (3.49%)	0	0	0	0	0	1	1	1
26	misc	3 (3.49%)	0	0	0	1	1	0	0	1
28.1	DNA.synthesis/chromatin structure	3 (3.49%)	0	0	0	2	0	1	0	0
28.1.1	DNA.synthesis/chromatin structure.retrotransposon/transposase	3 (3.49%)	0	0	0	2	0	1	0	0
28.1.1.4	DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase	3 (3.49%)	0	0	0	2	0	1	0	0
29.2.1.2.2.57	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A	3 (3.49%)	1	1	0	1	0	0	0	0
30.2	signalling.receptor kinases	3 (3.49%)	0	0	2	0	1	0	0	0
31	cell	3 (3.49%)	0	0	0	0	2	1	0	0
16.1.4	secondary metabolism.isoprenoids.carotenoids	2 (2.33%)	0	0	0	0	0	1	0	1
16.1.4.4	secondary metabolism.isoprenoids.carotenoids.lycopene epsilon cyclase	2 (2.33%)	0	0	0	0	0	1	0	1
27.4	RNA.RNA binding	2 (2.33%)	0	0	0	0	0	2	0	0
28.2	DNA.repair	2 (2.33%)	0	0	0	1	1	0	0	0
28.99	DNA.unspecified	2 (2.33%)	0	0	0	0	0	2	0	0
29.4	protein.postranslational modification	2 (2.33%)	0	0	0	1	0	0	0	1
29.4.1	protein.postranslational modification.kinase	2 (2.33%)	0	0	0	1	0	0	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	2 (2.33%)	0	0	0	1	0	0	0	1
29.5	protein.degradation	2 (2.33%)	0	0	0	0	0	0	0	2
30.2.17	signalling.receptor kinases.DUF 26	2 (2.33%)	0	0	2	0	0	0	0	0
31.3	cell.cycle	2 (2.33%)	0	0	0	0	2	0	0	0
2	major CHO metabolism	1 (1.16%)	0	0	0	0	0	0	0	1
2.1	major CHO metabolism.synthesis	1 (1.16%)	0	0	0	0	0	0	0	1
5	fermentation	1 (1.16%)	0	0	0	1	0	0	0	0
5.10	fermentation.aldehyde dehydrogenase	1 (1.16%)	0	0	0	1	0	0	0	0
10	cell wall	1 (1.16%)	0	0	0	0	1	0	0	0
10.6	cell wall.degradation	1 (1.16%)	0	0	0	0	1	0	0	0
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases	1 (1.16%)	0	0	0	0	1	0	0	0
2.1.2	major CHO metabolism.synthesis.starch	1 (1.16%)	0	0	0	0	0	0	0	1
2.1.2.2	major CHO metabolism.synthesis.starch.starch synthase	1 (1.16%)	0	0	0	0	0	0	0	1
11	lipid metabolism	1 (1.16%)	0	0	0	0	1	0	0	0
11.1	lipid metabolism.FA synthesis and FA elongation	1 (1.16%)	0	0	0	0	1	0	0	0
11.1.11	lipid metabolism.FA synthesis and FA elongation.fatty acid elongase	1 (1.16%)	0	0	0	0	1	0	0	0
13.1.2.3.21	amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase	1 (1.16%)	0	0	1	0	0	0	0	0
16.1.5	secondary metabolism.isoprenoids.terpenoids	1 (1.16%)	0	0	0	0	0	0	1	0
17	hormone metabolism	1 (1.16%)	0	0	0	1	0	0	0	0
17.4	hormone metabolism.cytokinin	1 (1.16%)	0	0	0	1	0	0	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (1.16%)	0	0	0	1	0	0	0	0
26.16	misc.myrosinases-lectin-jacalin	1 (1.16%)	0	0	0	0	0	0	0	1
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (1.16%)	0	0	0	1	0	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	1 (1.16%)	0	0	0	0	1	0	0	0
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	1 (1.16%)	0	0	0	0	1	0	0	0
27.1.1	RNA.processing.splicing	1 (1.16%)	0	0	1	0	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (1.16%)	0	0	0	0	1	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (1.16%)	0	0	1	0	0	0	0	0
27.3.28	RNA.regulation of transcription.SBP,Squamosa promoter binding protein family	1 (1.16%)	0	0	0	0	0	0	1	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	1 (1.16%)	0	0	1	0	0	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (1.16%)	1	0	0	0	0	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	1 (1.16%)	0	0	0	0	1	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (1.16%)	0	0	1	0	0	0	0	0
27.3.99	RNA.regulation of transcription.unclassified	1 (1.16%)	0	0	0	0	0	1	0	0
29.2.1.1.2.1.3	protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S3	1 (1.16%)	0	0	0	0	0	0	1	0
29.3	protein.targeting	1 (1.16%)	1	0	0	0	0	0	0	0
29.3.4	protein.targeting.secretory pathway	1 (1.16%)	1	0	0	0	0	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (1.16%)	1	0	0	0	0	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (1.16%)	0	0	0	0	0	1	0	0
29.5.9	protein.degradation.AAA type	1 (1.16%)	0	0	0	0	0	0	0	1
30.2.11	signalling.receptor kinases.leucine rich repeat XI	1 (1.16%)	0	0	0	0	1	0	0	0
30.5	signalling.G-proteins	1 (1.16%)	0	0	0	0	0	0	0	1
31.1	cell.organisation	1 (1.16%)	0	0	0	0	0	1	0	0
33	development	1 (1.16%)	0	0	0	0	0	0	1	0
33.3	development.squamosa promoter binding like (SPL)	1 (1.16%)	0	0	0	0	0	0	1	0