MapMan terms associated with a binding site

Binding site
Motif_8
Name
PALBOXPPC
Description
Box P; Consensus; One of three putative cis-acting elements (boxes P, A, and L) of phenylalanine ammonia-lyase (PAL; EC 4.3.1.5) genes in parsley; None of these elements (boxes P, A, and L) alone, or the promoter region containing all of them together, conferred elicitor or light responsiveness. These elements appear to be necessary but not sufficient for elicitor- or light-mediated PAL gene activation
#Associated genes
333
#Associated MapMan terms
174

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MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA45 (13.51%)120491144010
27.3RNA.regulation of transcription40 (12.01%)12038114209
16secondary metabolism27 (8.11%)3103453404
26misc27 (8.11%)0104564205
16.2secondary metabolism.phenylpropanoids24 (7.21%)2103452403
16.2.1secondary metabolism.phenylpropanoids.lignin biosynthesis24 (7.21%)2103452403
29protein20 (6.01%)0001524206
13amino acid metabolism18 (5.41%)1401242202
17hormone metabolism17 (5.11%)1002712103
29.4protein.postranslational modification16 (4.80%)0001522204
13.1amino acid metabolism.synthesis14 (4.20%)1300141202
16.2.1.1secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL14 (4.20%)0003330203
30signalling14 (4.20%)0001501106
13.1.6amino acid metabolism.synthesis.aromatic aa11 (3.30%)1100131202
13.1.6.1amino acid metabolism.synthesis.aromatic aa.chorismate8 (2.40%)1100111102
16.2.1.3secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL8 (2.40%)1100121200
28DNA8 (2.40%)0101401001
31cell8 (2.40%)0000111104
1PS7 (2.10%)0100201003
20stress7 (2.10%)0000312001
27.3.11RNA.regulation of transcription.C2H2 zinc finger family7 (2.10%)0001212100
34transport7 (2.10%)0000131101
10cell wall6 (1.80%)0000122100
13.1.6.1.6amino acid metabolism.synthesis.aromatic aa.chorismate.5-enolpyruvylshikimate-3-phosphate synthase6 (1.80%)0100111101
17.4hormone metabolism.cytokinin6 (1.80%)1001201001
26.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein6 (1.80%)0000130101
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family6 (1.80%)0000212100
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX6 (1.80%)0002101002
17.2hormone metabolism.auxin5 (1.50%)0000210101
17.4.1hormone metabolism.cytokinin.synthesis-degradation5 (1.50%)1001200001
20.2stress.abiotic5 (1.50%)0000301001
27.3.99RNA.regulation of transcription.unclassified5 (1.50%)0001030001
28.2DNA.repair5 (1.50%)0000301001
29.4.1protein.postranslational modification.kinase5 (1.50%)0001201001
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII5 (1.50%)0001201001
30.3signalling.calcium5 (1.50%)0000200003
33development5 (1.50%)0101020001
33.99development.unspecified5 (1.50%)0101020001
10.1cell wall.precursor synthesis4 (1.20%)0000121000
10.1.6cell wall.precursor synthesis.GAE4 (1.20%)0000121000
13.2amino acid metabolism.degradation4 (1.20%)0101101000
26.10misc.cytochrome P4504 (1.20%)0000011002
29.5.11.4.2protein.degradation.ubiquitin.E3.RING4 (1.20%)0101001001
30.2signalling.receptor kinases4 (1.20%)0001100101
30.2.11signalling.receptor kinases.leucine rich repeat XI4 (1.20%)0001100101
1.2PS.photorespiration3 (0.90%)0000101001
7OPP3 (0.90%)0001011000
8TCA / org transformation3 (0.90%)0000010002
13.2.6amino acid metabolism.degradation.aromatic aa3 (0.90%)0001101000
13.2.6.2amino acid metabolism.degradation.aromatic aa.tyrosine3 (0.90%)0001101000
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated3 (0.90%)0000010101
20.2.3stress.abiotic.drought/salt3 (0.90%)0000300000
7.1OPP.oxidative PP3 (0.90%)0001011000
25C1-metabolism3 (0.90%)0001010001
26.12misc.peroxidases3 (0.90%)0000201000
26.9misc.glutathione S transferases3 (0.90%)0002010000
27.1RNA.processing3 (0.90%)0001000101
28.1DNA.synthesis/chromatin structure3 (0.90%)0101100000
29.5protein.degradation3 (0.90%)0000002001
29.5.11protein.degradation.ubiquitin3 (0.90%)0000002001
30.11signalling.light3 (0.90%)0000200001
31.3cell.cycle3 (0.90%)0000010101
31.4cell.vesicle transport3 (0.90%)0000101001
7.1.3OPP.oxidative PP.6-phosphogluconate dehydrogenase3 (0.90%)0001011000
1.1PS.lightreaction2 (0.60%)0000100001
1.2.4PS.photorespiration.glycine cleavage2 (0.60%)0000100001
1.2.4.4PS.photorespiration.glycine cleavage.H protein2 (0.60%)0000100001
1.3PS.calvin cycle2 (0.60%)0100000001
8.1TCA / org transformation.TCA2 (0.60%)0000010001
11lipid metabolism2 (0.60%)0000011000
11.1lipid metabolism.FA synthesis and FA elongation2 (0.60%)0000011000
12N-metabolism2 (0.60%)0000010001
12.2N-metabolism.ammonia metabolism2 (0.60%)0000010001
12.2.1N-metabolism.ammonia metabolism.glutamate synthase2 (0.60%)0000010001
13.1.6.1.1amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase2 (0.60%)1000000001
13.1.6.5amino acid metabolism.synthesis.aromatic aa.tryptophan2 (0.60%)0000020000
16.8secondary metabolism.flavonoids2 (0.60%)0000001001
16.8.3secondary metabolism.flavonoids.dihydroflavonols2 (0.60%)0000001001
16.8.3.1secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase2 (0.60%)0000001001
17.1hormone metabolism.abscisic acid2 (0.60%)0000200000
17.1.2hormone metabolism.abscisic acid.signal transduction2 (0.60%)0000200000
17.2.2hormone metabolism.auxin.signal transduction2 (0.60%)0000200000
17.6hormone metabolism.gibberelin2 (0.60%)0001001000
17.6.2hormone metabolism.gibberelin.signal transduction2 (0.60%)0001001000
20.1stress.biotic2 (0.60%)0000011000
23nucleotide metabolism2 (0.60%)0000020000
25.6C1-metabolism.methylenetetrahydrofolate reductase2 (0.60%)0001010000
26.19misc.plastocyanin-like2 (0.60%)0000110000
26.22misc.short chain dehydrogenase/reductase (SDR)2 (0.60%)0000001001
26.28misc.GDSL-motif lipase2 (0.60%)0101000000
26.7misc.oxidases - copper, flavone etc2 (0.60%)0000000101
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family2 (0.60%)0000100001
27.3.30RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family2 (0.60%)0000200000
27.3.40RNA.regulation of transcription.Aux/IAA family2 (0.60%)1000000001
27.3.67RNA.regulation of transcription.putative transcription regulator2 (0.60%)0000000002
27.4RNA.RNA binding2 (0.60%)0000100100
29.5.11.5protein.degradation.ubiquitin.ubiquitin protease2 (0.60%)0000001001
30.5signalling.G-proteins2 (0.60%)0000001001
31.1cell.organisation2 (0.60%)0000000002
8.1.1TCA / org transformation.TCA.pyruvate DH2 (0.60%)0000010001
1.1.1PS.lightreaction.photosystem II1 (0.30%)0000100000
1.1.1.1PS.lightreaction.photosystem II.LHC-II1 (0.30%)0000100000
1.1.40PS.lightreaction.cyclic electron flow-chlororespiration1 (0.30%)0000000001
1.2.6PS.photorespiration.hydroxypyruvate reductase1 (0.30%)0000001000
1.3.11PS.calvin cycle.RPE1 (0.30%)0100000000
1.3.8PS.calvin cycle.transketolase1 (0.30%)0000000001
10.2cell wall.cellulose synthesis1 (0.30%)0000001000
10.5cell wall.cell wall proteins1 (0.30%)0000000100
10.5.4cell wall.cell wall proteins.HRGP1 (0.30%)0000000100
11.1.10lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase1 (0.30%)0000001000
11.1.13lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein1 (0.30%)0000010000
13.1.1amino acid metabolism.synthesis.central amino acid metabolism1 (0.30%)0100000000
13.1.1.2amino acid metabolism.synthesis.central amino acid metabolism.aspartate1 (0.30%)0100000000
13.1.1.2.1amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase1 (0.30%)0100000000
13.1.1.3.11amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase1 (0.30%)0000010000
13.1.3amino acid metabolism.synthesis.aspartate family1 (0.30%)0000010000
13.1.3.4amino acid metabolism.synthesis.aspartate family.methionine1 (0.30%)0000010000
13.1.3.4.11amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase1 (0.30%)1000000000
13.1.5amino acid metabolism.synthesis.serine-glycine-cysteine group1 (0.30%)0100000000
13.1.5.1amino acid metabolism.synthesis.serine-glycine-cysteine group.serine1 (0.30%)0100000000
13.1.5.1.2amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine aminotransferase1 (0.30%)0100000000
13.1.6.3amino acid metabolism.synthesis.aromatic aa.phenylalanine1 (0.30%)0000000100
13.1.6.3.1amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase1 (0.30%)0000000100
13.2.5amino acid metabolism.degradation.serine-glycine-cysteine group1 (0.30%)0100000000
13.2.5.2amino acid metabolism.degradation.serine-glycine-cysteine group.glycine1 (0.30%)0100000000
16.1secondary metabolism.isoprenoids1 (0.30%)1000000000
16.2.1.10secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD1 (0.30%)0000001000
16.2.1.5secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H1 (0.30%)1000000000
17.4.2hormone metabolism.cytokinin.signal transduction1 (0.30%)0000001000
17.5hormone metabolism.ethylene1 (0.30%)0000000001
17.5.1hormone metabolism.ethylene.synthesis-degradation1 (0.30%)0000000001
17.7hormone metabolism.jasmonate1 (0.30%)0000100000
17.7.1hormone metabolism.jasmonate.synthesis-degradation1 (0.30%)0000100000
17.7.1.4hormone metabolism.jasmonate.synthesis-degradation.allene oxidase cyclase1 (0.30%)0000100000
20.1.7stress.biotic.PR-proteins1 (0.30%)0000001000
20.2.1stress.abiotic.heat1 (0.30%)0000000001
20.2.2stress.abiotic.cold1 (0.30%)0000001000
23.2nucleotide metabolism.degradation1 (0.30%)0000010000
23.4nucleotide metabolism.phosphotransfer and pyrophosphatases1 (0.30%)0000010000
23.4.2nucleotide metabolism.phosphotransfer and pyrophosphatases.guanylate kinase1 (0.30%)0000010000
26.16misc.myrosinases-lectin-jacalin1 (0.30%)0001000000
26.2misc.UDP glucosyl and glucoronyl transferases1 (0.30%)0000100000
26.4misc.beta 1,3 glucan hydrolases1 (0.30%)0000001000
26.4.1misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase1 (0.30%)0000001000
27.1.2RNA.processing.RNA helicase1 (0.30%)0001000000
27.3.15RNA.regulation of transcription.CCAAT box binding factor family, HAP31 (0.30%)0000000001
27.3.17RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family1 (0.30%)0000010000
27.3.25RNA.regulation of transcription.MYB domain transcription factor family1 (0.30%)0000010000
27.3.26RNA.regulation of transcription.MYB-related transcription factor family1 (0.30%)0000010000
27.3.29RNA.regulation of transcription.TCP transcription factor family1 (0.30%)0000010000
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family1 (0.30%)0000010000
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family1 (0.30%)0100000000
27.3.35RNA.regulation of transcription.bZIP transcription factor family1 (0.30%)0000100000
27.3.50RNA.regulation of transcription.General Transcription1 (0.30%)0000000001
27.3.57RNA.regulation of transcription.JUMONJI family1 (0.30%)0000000001
27.3.63RNA.regulation of transcription.PHD finger transcription factor1 (0.30%)0100000000
27.3.8RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family1 (0.30%)0001000000
28.1.3DNA.synthesis/chromatin structure.histone1 (0.30%)0000100000
29.3.4protein.targeting.secretory pathway1 (0.30%)0000000001
29.3.4.2protein.targeting.secretory pathway.golgi1 (0.30%)0000000001
30.2.17signalling.receptor kinases.DUF 261 (0.30%)0000100000
8.2TCA / org transformation.other organic acid transformations1 (0.30%)0000000001
29.3protein.targeting1 (0.30%)0000000001
34.1transport.p- and v-ATPases1 (0.30%)0000001000
34.15transport.potassium1 (0.30%)0000010000
34.19transport.Major Intrinsic Proteins1 (0.30%)0000010000
34.19.1transport.Major Intrinsic Proteins.PIP1 (0.30%)0000010000
34.6transport.sulphate1 (0.30%)0000010000
34.7transport.phosphate1 (0.30%)0000100000
34.8transport.metabolite transporters at the envelope membrane1 (0.30%)0000000100
34.9transport.metabolite transporters at the mitochondrial membrane1 (0.30%)0000000001
8.1.1.1TCA / org transformation.TCA.pyruvate DH.E11 (0.30%)0000000001
8.1.1.2TCA / org transformation.TCA.pyruvate DH.E21 (0.30%)0000010000
8.2.11TCA / org transformation.other organic acid transformatons.atp-citrate lyase1 (0.30%)0000000001