MapMan terms associated with a binding site

Binding site
Motif_688
Name
AMMORESIVDCRNIA1
Description
Motif (IVD) found in the Chlamydomonas Nia1 gene promoter; Located between -51 and -42; Involved in Nia1 transcription repression
#Associated genes
694
#Associated MapMan terms
240

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MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA127 (18.30%)1390103225161309
27.3RNA.regulation of transcription90 (12.97%)8606262012606
29protein63 (9.08%)890713118304
30signalling38 (5.48%)25010482205
26misc27 (3.89%)4302334305
20stress24 (3.46%)1505430105
20.2stress.abiotic21 (3.03%)1505330004
29.4protein.postranslational modification21 (3.03%)0300763002
16secondary metabolism20 (2.88%)11011232000
29.5protein.degradation19 (2.74%)5104332001
31cell18 (2.59%)2301153201
17hormone metabolism17 (2.45%)2100451202
33development17 (2.45%)2400234101
34transport17 (2.45%)0102443003
33.99development.unspecified16 (2.31%)2400233101
27.2RNA.transcription15 (2.16%)2102111502
29.5.11.4.2protein.degradation.ubiquitin.E3.RING14 (2.02%)2302222001
20.2.1stress.abiotic.heat13 (1.87%)0204230002
29.3protein.targeting13 (1.87%)3301222000
10cell wall12 (1.73%)1102341000
27.1RNA.processing12 (1.73%)1200223101
28DNA12 (1.73%)0001423002
9mitochondrial electron transport / ATP synthesis11 (1.59%)1001101106
11lipid metabolism11 (1.59%)0001441100
29.3.4protein.targeting.secretory pathway11 (1.59%)2301221000
30.3signalling.calcium11 (1.59%)1302130001
27.4RNA.RNA binding10 (1.44%)2002320100
30.2signalling.receptor kinases10 (1.44%)0106210000
11.1lipid metabolism.FA synthesis and FA elongation9 (1.30%)0001430100
11.1.10lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase9 (1.30%)0001430100
13amino acid metabolism9 (1.30%)1102221000
26.2misc.UDP glucosyl and glucoronyl transferases9 (1.30%)0200102202
27.3.67RNA.regulation of transcription.putative transcription regulator9 (1.30%)1000413000
28.1DNA.synthesis/chromatin structure9 (1.30%)0001303002
29.5.11protein.degradation.ubiquitin9 (1.30%)3001131000
31.1cell.organisation9 (1.30%)1100131101
16.8secondary metabolism.flavonoids8 (1.15%)1004120000
29.4.1protein.postranslational modification.kinase8 (1.15%)0100331000
1PS7 (1.01%)0000120400
1.1PS.lightreaction7 (1.01%)0000120400
16.10secondary metabolism.simple phenols7 (1.01%)0106000000
17.5hormone metabolism.ethylene7 (1.01%)1100301100
27.3.11RNA.regulation of transcription.C2H2 zinc finger family7 (1.01%)2001120100
27.3.25RNA.regulation of transcription.MYB domain transcription factor family7 (1.01%)0201300100
27.3.36RNA.regulation of transcription.Argonaute7 (1.01%)0100211002
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII7 (1.01%)0100330000
30.11signalling.light7 (1.01%)0001121200
10.6cell wall.degradation6 (0.86%)1101021000
13.1amino acid metabolism.synthesis6 (0.86%)1101210000
17.2hormone metabolism.auxin6 (0.86%)0000140001
26.10misc.cytochrome P4506 (0.86%)1002011001
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family6 (0.86%)0000230001
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family6 (0.86%)1000310100
29.3.4.99protein.targeting.secretory pathway.unspecified6 (0.86%)1101021000
30.2.17signalling.receptor kinases.DUF 266 (0.86%)0004110000
1.1.40PS.lightreaction.cyclic electron flow-chlororespiration5 (0.72%)0000020300
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated5 (0.72%)0000140000
20.2.3stress.abiotic.drought/salt5 (0.72%)1300000001
27.3.12RNA.regulation of transcription.C3H zinc finger family5 (0.72%)0000111101
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family5 (0.72%)0001121000
27.3.99RNA.regulation of transcription.unclassified5 (0.72%)0000130001
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX5 (0.72%)0101101001
9.9mitochondrial electron transport / ATP synthesis.F1-ATPase5 (0.72%)1000100102
23nucleotide metabolism5 (0.72%)1101001001
30.5signalling.G-proteins5 (0.72%)1000020002
31.4cell.vesicle transport5 (0.72%)1001021000
34.22transport.cyclic nucleotide or calcium regulated channels5 (0.72%)0102020000
13.1.3amino acid metabolism.synthesis.aspartate family4 (0.58%)0101110000
13.1.3.4amino acid metabolism.synthesis.aspartate family.methionine4 (0.58%)0101110000
16.1secondary metabolism.isoprenoids4 (0.58%)0000112000
16.8.1secondary metabolism.flavonoids.anthocyanins4 (0.58%)1000120000
16.8.1.21secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase4 (0.58%)1000120000
16.8.5secondary metabolism.flavonoids.isoflavones4 (0.58%)0004000000
16.8.5.1secondary metabolism.flavonoids.isoflavones.isoflavone reductase4 (0.58%)0004000000
17.5.1hormone metabolism.ethylene.synthesis-degradation4 (0.58%)0000201100
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family4 (0.58%)0000310000
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors4 (0.58%)0000301000
27.3.52RNA.regulation of transcription.Global transcription factor group4 (0.58%)1100100100
29.3.4.3protein.targeting.secretory pathway.vacuole4 (0.58%)1200100000
29.5.11.20protein.degradation.ubiquitin.proteasom4 (0.58%)1001110000
34.3transport.amino acids4 (0.58%)0000220000
10.2cell wall.cellulose synthesis3 (0.43%)0001110000
10.6.1cell wall.degradation.cellulases and beta -1,4-glucanases3 (0.43%)0100011000
10.6.3cell wall.degradation.pectate lyases and polygalacturonases3 (0.43%)1001010000
13.2amino acid metabolism.degradation3 (0.43%)0001011000
23.1nucleotide metabolism.synthesis3 (0.43%)1001000001
27.1.2RNA.processing.RNA helicase3 (0.43%)0000210000
27.3.35RNA.regulation of transcription.bZIP transcription factor family3 (0.43%)1000002000
27.3.40RNA.regulation of transcription.Aux/IAA family3 (0.43%)0000210000
28.1.3DNA.synthesis/chromatin structure.histone3 (0.43%)0000101001
29.2protein.synthesis3 (0.43%)0101000001
29.5.11.3protein.degradation.ubiquitin.E23 (0.43%)0000021000
29.5.3protein.degradation.cysteine protease3 (0.43%)1100001000
29.5.5protein.degradation.serine protease3 (0.43%)0002000001
29.6protein.folding3 (0.43%)0001001100
34.1transport.p- and v-ATPases3 (0.43%)0000001002
10.2.1cell wall.cellulose synthesis.cellulose synthase2 (0.29%)0000110000
10.8cell wall.pectin*esterases2 (0.29%)0000200000
10.8.1cell wall.pectin*esterases.PME2 (0.29%)0000200000
13.1.5amino acid metabolism.synthesis.serine-glycine-cysteine group2 (0.29%)1000100000
13.2.1amino acid metabolism.degradation.central amino acid metabolism2 (0.29%)0001001000
13.2.1.2amino acid metabolism.degradation.central amino acid metabolism.aspartate2 (0.29%)0001001000
16.1.4secondary metabolism.isoprenoids.carotenoids2 (0.29%)0000110000
16.1.5secondary metabolism.isoprenoids.terpenoids2 (0.29%)0000002000
17.5.1.1hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase2 (0.29%)0000101000
17.5.2hormone metabolism.ethylene.signal transduction2 (0.29%)1100000000
20.1stress.biotic2 (0.29%)0000100001
20.1.7stress.biotic.PR-proteins2 (0.29%)0000100001
20.2.4stress.abiotic.touch/wounding2 (0.29%)0001000001
23.1.2nucleotide metabolism.synthesis.purine2 (0.29%)1001000000
23.1.2.31nucleotide metabolism.synthesis.purine.GMP synthetase2 (0.29%)1001000000
26.3misc.gluco-, galacto- and mannosidases2 (0.29%)0100010000
26.3.4misc.gluco-, galacto- and mannosidases.endoglucanase2 (0.29%)0100010000
26.7misc.oxidases - copper, flavone etc2 (0.29%)0000101000
26.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases2 (0.29%)1000000100
27.1.1RNA.processing.splicing2 (0.29%)0000001100
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP2 (0.29%)1100000000
27.3.39RNA.regulation of transcription.AtSR Transcription Factor family2 (0.29%)0000010001
28.2DNA.repair2 (0.29%)0000020000
29.2.1.1.1.1.7protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S72 (0.29%)0001000100
29.2.1.1.2.2.37protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L372 (0.29%)0000200000
29.2.4protein.synthesis.elongation2 (0.29%)0101000000
29.5.1protein.degradation.subtilases2 (0.29%)1000100000
29.7protein.glycosylation2 (0.29%)0100100000
29.7.12protein.glycosylation.beta-1,3-galactosyltransferase(beta-1,3-GalT)2 (0.29%)0100100000
29.8protein.assembly and cofactor ligation2 (0.29%)0000000200
30.2.11signalling.receptor kinases.leucine rich repeat XI2 (0.29%)0002000000
30.2.3signalling.receptor kinases.leucine rich repeat III2 (0.29%)0100100000
9.1mitochondrial electron transport / ATP synthesis.NADH-DH2 (0.29%)0000001001
30.4signalling.phosphinositides2 (0.29%)0101000000
30.7signalling.14-3-3 proteins2 (0.29%)0000001001
31.2cell.division2 (0.29%)0200000000
31.3cell.cycle2 (0.29%)0000001100
31.3.1cell.cycle.peptidylprolyl isomerase2 (0.29%)0000001100
34.19transport.Major Intrinsic Proteins2 (0.29%)0000001001
9.1.2mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear2 (0.29%)0000001001
9.6mitochondrial electron transport / ATP synthesis.cytochrome c2 (0.29%)0000000002
9.7mitochondrial electron transport / ATP synthesis.cytochrome c oxidase2 (0.29%)0001000001
1.1.2PS.lightreaction.photosystem I1 (0.14%)0000100000
1.1.2.1PS.lightreaction.photosystem I.LHC-I1 (0.14%)0000100000
1.1.4PS.lightreaction.ATP synthase1 (0.14%)0000000100
1.1.4.6PS.lightreaction.ATP synthase.chloroplastic subunit a1 (0.14%)0000000100
3minor CHO metabolism1 (0.14%)0000001000
4glycolysis1 (0.14%)0000000100
6gluconeogenesis / glyoxylate cycle1 (0.14%)0001000000
10.2.2cell wall.cellulose synthesis.COBRA1 (0.14%)0001000000
10.5cell wall.cell wall proteins1 (0.14%)0000010000
10.5.3cell wall.cell wall proteins.LRR1 (0.14%)0000010000
11.10lipid metabolism.glycolipid synthesis1 (0.14%)0000010000
11.10.1lipid metabolism.glycolipid synthesis.MGDG synthase1 (0.14%)0000010000
11.9lipid metabolism.lipid degradation1 (0.14%)0000001000
11.9.4lipid metabolism.lipid degradation.beta-oxidation1 (0.14%)0000001000
11.9.4.2lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH1 (0.14%)0000001000
13.1.5.1amino acid metabolism.synthesis.serine-glycine-cysteine group.serine1 (0.14%)0000100000
13.1.5.1.1amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase1 (0.14%)0000100000
13.1.5.3amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine1 (0.14%)1000000000
13.1.5.3.1amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL1 (0.14%)1000000000
13.2.5amino acid metabolism.degradation.serine-glycine-cysteine group1 (0.14%)0000010000
13.2.5.2amino acid metabolism.degradation.serine-glycine-cysteine group.glycine1 (0.14%)0000010000
15metal handling1 (0.14%)0001000000
15.2metal handling.binding, chelation and storage1 (0.14%)0001000000
16.1.4.21secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase1 (0.14%)0000010000
16.1.4.4secondary metabolism.isoprenoids.carotenoids.lycopene epsilon cyclase1 (0.14%)0000100000
16.4secondary metabolism.N misc1 (0.14%)0001000000
16.4.1secondary metabolism.N misc.alkaloid-like1 (0.14%)0001000000
17.1hormone metabolism.abscisic acid1 (0.14%)0000000100
17.1.3hormone metabolism.abscisic acid.induced-regulated-responsive-activated1 (0.14%)0000000100
17.2.2hormone metabolism.auxin.signal transduction1 (0.14%)0000000001
17.4hormone metabolism.cytokinin1 (0.14%)0000010000
17.4.1hormone metabolism.cytokinin.synthesis-degradation1 (0.14%)0000010000
17.5.3hormone metabolism.ethylene.induced-regulated-responsive-activated1 (0.14%)0000100000
17.6hormone metabolism.gibberelin1 (0.14%)0000100000
17.6.1hormone metabolism.gibberelin.synthesis-degradation1 (0.14%)0000100000
17.6.1.11hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase1 (0.14%)0000100000
17.7hormone metabolism.jasmonate1 (0.14%)0000000001
17.7.1hormone metabolism.jasmonate.synthesis-degradation1 (0.14%)0000000001
17.7.1.2hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase1 (0.14%)0000000001
17.8hormone metabolism.salicylic acid1 (0.14%)1000000000
17.8.1hormone metabolism.salicylic acid.synthesis-degradation1 (0.14%)1000000000
18Co-factor and vitamine metabolism1 (0.14%)0000010000
19tetrapyrrole synthesis1 (0.14%)0000010000
19.1tetrapyrrole synthesis.glu-tRNA synthetase1 (0.14%)0000010000
20.2.2stress.abiotic.cold1 (0.14%)0000100000
21redox1 (0.14%)0000010000
21.4redox.glutaredoxins1 (0.14%)0000010000
23.1.1nucleotide metabolism.synthesis.pyrimidine1 (0.14%)0000000001
23.1.1.10nucleotide metabolism.synthesis.pyrimidine.CTP synthetase1 (0.14%)0000000001
23.2nucleotide metabolism.degradation1 (0.14%)0100000000
23.2.1nucleotide metabolism.degradation.pyrimidine1 (0.14%)0100000000
23.2.1.4nucleotide metabolism.degradation.pyrimidine.dihydropyrimidinase1 (0.14%)0100000000
23.4nucleotide metabolism.phosphotransfer and pyrophosphatases1 (0.14%)0000001000
23.4.2nucleotide metabolism.phosphotransfer and pyrophosphatases.guanylate kinase1 (0.14%)0000001000
24Biodegradation of Xenobiotics1 (0.14%)0000010000
26.1misc.misc21 (0.14%)1000000000
26.12misc.peroxidases1 (0.14%)0000100000
26.17misc.dynamin1 (0.14%)0000000001
26.22misc.short chain dehydrogenase/reductase (SDR)1 (0.14%)1000000000
26.28misc.GDSL-motif lipase1 (0.14%)0000010000
26.9misc.glutathione S transferases1 (0.14%)0000000001
27.1.19RNA.processing.ribonucleases1 (0.14%)0000001000
27.3.1RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family1 (0.14%)0000001000
27.3.10RNA.regulation of transcription.C2C2(Zn) YABBY family1 (0.14%)0000010000
27.3.13RNA.regulation of transcription.CCAAT box binding factor family, DR11 (0.14%)0000010000
27.3.18RNA.regulation of transcription.E2F/DP transcription factor family1 (0.14%)0001000000
27.3.21RNA.regulation of transcription.GRAS transcription factor family1 (0.14%)0001000000
27.3.26RNA.regulation of transcription.MYB-related transcription factor family1 (0.14%)1000000000
27.3.4RNA.regulation of transcription.ARF, Auxin Response Factor family1 (0.14%)0000000100
27.3.50RNA.regulation of transcription.General Transcription1 (0.14%)0100000000
27.3.60RNA.regulation of transcription.NIN-like bZIP-related family1 (0.14%)0000001000
27.3.65RNA.regulation of transcription.Polycomb Group (PcG)1 (0.14%)0000010000
27.3.73RNA.regulation of transcription.Zn-finger(CCHC)1 (0.14%)0000001000
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family1 (0.14%)0001000000
28.99DNA.unspecified1 (0.14%)0000100000
29.2.1.1.1.2.20protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L201 (0.14%)0100000000
29.2.1.2.2.510protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A1 (0.14%)0100000000
29.2.1.2.2.80protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P01 (0.14%)0000000100
29.3.1protein.targeting.nucleus1 (0.14%)1000000000
29.3.2protein.targeting.mitochondria1 (0.14%)0000001000
29.3.4.4protein.targeting.secretory pathway.plasma membrane1 (0.14%)0000100000
29.5.11.1protein.degradation.ubiquitin.ubiquitin1 (0.14%)1000000000
29.5.11.4.4protein.degradation.ubiquitin.E3.APC1 (0.14%)0001000000
29.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ1 (0.14%)1000000000
29.5.11.5protein.degradation.ubiquitin.ubiquitin protease1 (0.14%)1000000000
29.5.4protein.degradation.aspartate protease1 (0.14%)0001000000
3.1minor CHO metabolism.raffinose family1 (0.14%)0000001000
3.1.2minor CHO metabolism.raffinose family.raffinose synthases1 (0.14%)0000001000
3.1.2.1minor CHO metabolism.raffinose family.raffinose synthases.known1 (0.14%)0000001000
30.2.24signalling.receptor kinases.S-locus glycoprotein like1 (0.14%)0001000000
30.4.1signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase1 (0.14%)0100000000
34.1.1transport.p- and v-ATPases.H+-transporting two-sector ATPase1 (0.14%)0000001000
34.19.2transport.Major Intrinsic Proteins.TIP1 (0.14%)0000000001
34.19.4transport.Major Intrinsic Proteins.SIP1 (0.14%)0000001000
4.1glycolysis.cytosolic branch1 (0.14%)0000000100
30.6signalling.MAP kinases1 (0.14%)0000000001
33.1development.storage proteins1 (0.14%)0000001000
34.16transport.ABC transporters and multidrug resistance systems1 (0.14%)0000100000
34.21transport.calcium1 (0.14%)0000100000
34.99transport.misc1 (0.14%)0000001000
4.1.13glycolysis.cytosolic branch.enolase1 (0.14%)0000000100
6.9gluconeogenesis / glyoxylate cycle.isocitrate lyase1 (0.14%)0001000000