PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_674
Name: SPL4;SPL1;SPL5
Description: Molecular characterisation of the Arabidopsis SBP-box genes. Gene,A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors

#Associated genes: 61
#Associated InterPro terms: 60

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InterPro	Description	#Associated genes	ath	bra	cme	egr	gma	ptr	ppe	sly	stu	vvi
IPR009057	Homeodomain-like	15 (24.59%)	2	3	1	0	4	3	2	0	0	0
IPR001005	SANT/Myb domain	9 (14.75%)	1	0	1	0	3	3	1	0	0	0
IPR014978	Glutamine-Leucine-Glutamine, QLQ	7 (11.48%)	0	0	0	1	2	0	1	1	1	1
IPR014977	WRC	7 (11.48%)	0	0	0	1	2	0	1	1	1	1
IPR017884	SANT domain	6 (9.84%)	0	0	1	0	2	2	1	0	0	0
IPR001356	Homeobox domain	4 (6.56%)	1	1	0	0	1	0	1	0	0	0
IPR011545	DNA/RNA helicase, DEAD/DEAH box type, N-terminal	3 (4.92%)	0	0	0	0	0	2	1	0	0	0
IPR001650	Helicase, C-terminal	3 (4.92%)	0	0	0	0	0	2	1	0	0	0
IPR014001	Helicase, superfamily 1/2, ATP-binding domain	3 (4.92%)	0	0	0	0	0	2	1	0	0	0
IPR000047	Helix-turn-helix motif	3 (4.92%)	1	0	0	0	1	0	1	0	0	0
IPR017970	Homeobox, conserved site	3 (4.92%)	1	0	0	0	1	0	1	0	0	0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	3 (4.92%)	0	0	0	0	0	2	1	0	0	0
IPR014014	RNA helicase, DEAD-box type, Q motif	3 (4.92%)	0	0	0	0	0	2	1	0	0	0
IPR002487	Transcription factor, K-box	3 (4.92%)	0	0	0	0	0	3	0	0	0	0
IPR002100	Transcription factor, MADS-box	3 (4.92%)	0	0	0	0	0	3	0	0	0	0
IPR020472	G-protein beta WD-40 repeat	2 (3.28%)	0	0	0	0	0	1	0	0	0	1
IPR017930	Myb domain	2 (3.28%)	0	0	0	0	1	1	0	0	0	0
IPR012677	Nucleotide-binding, alpha-beta plait	2 (3.28%)	2	0	0	0	0	0	0	0	0	0
IPR007650	Protein of unknown function DUF581	2 (3.28%)	1	0	1	0	0	0	0	0	0	0
IPR006734	Protein of unknown function DUF597	2 (3.28%)	0	0	0	0	2	0	0	0	0	0
IPR000504	RNA recognition motif domain	2 (3.28%)	2	0	0	0	0	0	0	0	0	0
IPR001680	WD40 repeat	2 (3.28%)	0	0	0	0	0	1	0	0	0	1
IPR017986	WD40-repeat-containing domain	2 (3.28%)	0	0	0	0	0	1	0	0	0	1
IPR015943	WD40/YVTN repeat-like-containing domain	2 (3.28%)	0	0	0	0	0	1	0	0	0	1
IPR000315	Zinc finger, B-box	2 (3.28%)	0	0	0	0	2	0	0	0	0	0
IPR003311	AUX/IAA protein	1 (1.64%)	0	0	0	0	1	0	0	0	0	0
IPR011525	Aux/IAA-ARF-dimerisation	1 (1.64%)	0	0	0	0	1	0	0	0	0	0
IPR010525	Auxin response factor	1 (1.64%)	0	0	0	0	1	0	0	0	0	0
IPR003340	B3 DNA binding domain	1 (1.64%)	0	0	0	0	1	0	0	0	0	0
IPR004827	Basic-leucine zipper domain	1 (1.64%)	0	0	0	0	0	1	0	0	0	0
IPR013591	Brevis radix (BRX) domain	1 (1.64%)	0	0	0	0	0	0	1	0	0	0
IPR018545	Btz domain	1 (1.64%)	0	0	0	0	1	0	0	0	0	0
IPR015300	DNA-binding pseudobarrel domain	1 (1.64%)	0	0	0	0	1	0	0	0	0	0
IPR000306	FYVE zinc finger	1 (1.64%)	0	0	0	0	0	0	1	0	0	0
IPR002109	Glutaredoxin	1 (1.64%)	0	0	0	1	0	0	0	0	0	0
IPR011905	Glutaredoxin-like, plant II	1 (1.64%)	0	0	0	1	0	0	0	0	0	0
IPR001951	Histone H4	1 (1.64%)	0	1	0	0	0	0	0	0	0	0
IPR019809	Histone H4, conserved site	1 (1.64%)	0	1	0	0	0	0	0	0	0	0
IPR007125	Histone core	1 (1.64%)	0	1	0	0	0	0	0	0	0	0
IPR009072	Histone-fold	1 (1.64%)	0	1	0	0	0	0	0	0	0	0
IPR006553	Leucine-rich repeat, cysteine-containing subtype	1 (1.64%)	0	0	0	0	0	0	0	0	0	1
IPR003441	NAC domain	1 (1.64%)	0	0	1	0	0	0	0	0	0	0
IPR002885	Pentatricopeptide repeat	1 (1.64%)	0	0	0	0	0	0	0	0	0	1
IPR011993	Pleckstrin homology-like domain	1 (1.64%)	0	0	0	0	0	0	1	0	0	0
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	1 (1.64%)	0	0	0	0	0	0	1	0	0	0
IPR000408	Regulator of chromosome condensation, RCC1	1 (1.64%)	0	0	0	0	0	0	1	0	0	0
IPR027230	SUMO-conjugating enzyme Ubc9	1 (1.64%)	0	0	0	0	0	0	0	0	0	1
IPR005606	Sec20	1 (1.64%)	0	0	0	0	0	1	0	0	0	0
IPR000727	Target SNARE coiled-coil domain	1 (1.64%)	0	0	0	0	0	1	0	0	0	0
IPR012336	Thioredoxin-like fold	1 (1.64%)	0	0	0	1	0	0	0	0	0	0
IPR027988	Transcription factor BREVIS RADIX, N-terminal domain	1 (1.64%)	0	0	0	0	0	0	1	0	0	0
IPR000608	Ubiquitin-conjugating enzyme, E2	1 (1.64%)	0	0	0	0	0	0	0	0	0	1
IPR023313	Ubiquitin-conjugating enzyme, active site	1 (1.64%)	0	0	0	0	0	0	0	0	0	1
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	1 (1.64%)	0	0	0	0	0	0	0	0	0	1
IPR008004	Uncharacterised protein family UPF0503	1 (1.64%)	0	0	0	0	0	1	0	0	0	0
IPR008889	VQ	1 (1.64%)	1	0	0	0	0	0	0	0	0	0
IPR004910	Yippee/Mis18	1 (1.64%)	0	0	0	0	0	1	0	0	0	0
IPR017455	Zinc finger, FYVE-related	1 (1.64%)	0	0	0	0	0	0	1	0	0	0
IPR011011	Zinc finger, FYVE/PHD-type	1 (1.64%)	0	0	0	0	0	0	1	0	0	0
IPR013083	Zinc finger, RING/FYVE/PHD-type	1 (1.64%)	0	0	0	0	0	0	1	0	0	0