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BLAST
WorkbenchInterPro domains associated with a binding site
- Binding site
- Motif_671
- Name
- GATA-1
- Description
- Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics
- #Associated genes
- 13
- #Associated InterPro terms
- 30
Click table-header(s) to enable sorting
| InterPro | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IPR005172 | CRC domain | 2 (15.38%) | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| IPR001487 | Bromodomain | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| IPR004367 | Cyclin, C-terminal domain | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR006671 | Cyclin, N-terminal | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR013763 | Cyclin-like | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR018501 | DDT domain superfamily | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| IPR003889 | FY-rich, C-terminal | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| IPR003888 | FY-rich, N-terminal | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| IPR000232 | Heat shock factor (HSF)-type, DNA-binding | 1 (7.69%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| IPR027725 | Heat shock transcription factor family | 1 (7.69%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| IPR027709 | Heat shock transcription factor, plant | 1 (7.69%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| IPR000048 | IQ motif, EF-hand binding site | 1 (7.69%) | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR006876 | LMBR1-like membrane protein | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR004142 | Ndr | 1 (7.69%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR002885 | Pentatricopeptide repeat | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR015511 | Pollen specific protein SF21 | 1 (7.69%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR005120 | Regulator of nonsense-mediated decay, UPF3 | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR020878 | Ribulose bisphosphate carboxylase, large chain, active site | 1 (7.69%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR020888 | Ribulose bisphosphate carboxylase, large subunit | 1 (7.69%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR000685 | Ribulose bisphosphate carboxylase, large subunit, C-terminal | 1 (7.69%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR017444 | Ribulose bisphosphate carboxylase, large subunit, N-terminal | 1 (7.69%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR017443 | Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal | 1 (7.69%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR011990 | Tetratricopeptide-like helical | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | 1 (7.69%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| IPR011011 | Zinc finger, FYVE/PHD-type | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| IPR019787 | Zinc finger, PHD-finger | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| IPR001965 | Zinc finger, PHD-type | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| IPR019786 | Zinc finger, PHD-type, conserved site | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | 1 (7.69%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |