Gene Ontology terms associated with a binding site

Binding site
Motif_671
Name
GATA-1
Description
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics
#Associated genes
13
#Associated GO terms
267
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding7 (53.85%)0110110102
GO:0005515protein binding4 (30.77%)0010000102
GO:1901363heterocyclic compound binding3 (23.08%)0000110100
GO:0097159organic cyclic compound binding3 (23.08%)0000110100
GO:0003677DNA binding2 (15.38%)0000100100
GO:0003824catalytic activity2 (15.38%)0100000100
GO:0043169cation binding2 (15.38%)0100000100
GO:0043167ion binding2 (15.38%)0100000100
GO:0046872metal ion binding2 (15.38%)0100000100
GO:0003676nucleic acid binding2 (15.38%)0000100100
GO:1901265nucleoside phosphate binding2 (15.38%)0000010100
GO:0000166nucleotide binding2 (15.38%)0000010100
GO:0043565sequence-specific DNA binding2 (15.38%)0000100100
GO:0036094small molecule binding2 (15.38%)0000010100
GO:0008080N-acetyltransferase activity1 (7.69%)0000000100
GO:0016410N-acyltransferase activity1 (7.69%)0000000100
GO:0016407acetyltransferase activity1 (7.69%)0000000100
GO:0016830carbon-carbon lyase activity1 (7.69%)0100000000
GO:0016831carboxy-lyase activity1 (7.69%)0100000000
GO:0004402histone acetyltransferase activity1 (7.69%)0000000100
GO:0042393histone binding1 (7.69%)0000000100
GO:0016829lyase activity1 (7.69%)0100000000
GO:0000287magnesium ion binding1 (7.69%)0100000000
GO:0008327methyl-CpG binding1 (7.69%)0000000100
GO:0001071nucleic acid binding transcription factor activity1 (7.69%)0000100000
GO:0016984ribulose-bisphosphate carboxylase activity1 (7.69%)0100000000
GO:0003700sequence-specific DNA binding transcription factor activity1 (7.69%)0000100000
GO:0016740transferase activity1 (7.69%)0000000100
GO:0016746transferase activity, transferring acyl groups1 (7.69%)0000000100
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups1 (7.69%)0000000100
GO:0046914transition metal ion binding1 (7.69%)0000000100
GO:0008270zinc ion binding1 (7.69%)0000000100

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process6 (46.15%)0011210100
GO:0008152metabolic process6 (46.15%)0110210100
GO:0071704organic substance metabolic process6 (46.15%)0110210100
GO:0016070RNA metabolic process5 (38.46%)0010210100
GO:0065007biological regulation5 (38.46%)0010210100
GO:0006725cellular aromatic compound metabolic process5 (38.46%)0010210100
GO:0044260cellular macromolecule metabolic process5 (38.46%)0010210100
GO:0044237cellular metabolic process5 (38.46%)0010210100
GO:0034641cellular nitrogen compound metabolic process5 (38.46%)0010210100
GO:0046483heterocycle metabolic process5 (38.46%)0010210100
GO:0043170macromolecule metabolic process5 (38.46%)0010210100
GO:0006807nitrogen compound metabolic process5 (38.46%)0010210100
GO:0090304nucleic acid metabolic process5 (38.46%)0010210100
GO:0006139nucleobase-containing compound metabolic process5 (38.46%)0010210100
GO:1901360organic cyclic compound metabolic process5 (38.46%)0010210100
GO:0044238primary metabolic process5 (38.46%)0010210100
GO:0050789regulation of biological process5 (38.46%)0010210100
GO:0050794regulation of cellular process5 (38.46%)0010210100
GO:0050896response to stimulus5 (38.46%)0100110101
GO:0044699single-organism process5 (38.46%)0101010101
GO:0032774RNA biosynthetic process4 (30.77%)0010200100
GO:0019438aromatic compound biosynthetic process4 (30.77%)0010200100
GO:0009058biosynthetic process4 (30.77%)0010200100
GO:0044249cellular biosynthetic process4 (30.77%)0010200100
GO:0034645cellular macromolecule biosynthetic process4 (30.77%)0010200100
GO:0044271cellular nitrogen compound biosynthetic process4 (30.77%)0010200100
GO:0010467gene expression4 (30.77%)0010200100
GO:0018130heterocycle biosynthetic process4 (30.77%)0010200100
GO:0009059macromolecule biosynthetic process4 (30.77%)0010200100
GO:0034654nucleobase-containing compound biosynthetic process4 (30.77%)0010200100
GO:1901362organic cyclic compound biosynthetic process4 (30.77%)0010200100
GO:1901576organic substance biosynthetic process4 (30.77%)0010200100
GO:2001141regulation of RNA biosynthetic process4 (30.77%)0010200100
GO:0051252regulation of RNA metabolic process4 (30.77%)0010200100
GO:0009889regulation of biosynthetic process4 (30.77%)0010200100
GO:0031326regulation of cellular biosynthetic process4 (30.77%)0010200100
GO:2000112regulation of cellular macromolecule biosynthetic process4 (30.77%)0010200100
GO:0031323regulation of cellular metabolic process4 (30.77%)0010200100
GO:0010468regulation of gene expression4 (30.77%)0010200100
GO:0010556regulation of macromolecule biosynthetic process4 (30.77%)0010200100
GO:0060255regulation of macromolecule metabolic process4 (30.77%)0010200100
GO:0019222regulation of metabolic process4 (30.77%)0010200100
GO:0051171regulation of nitrogen compound metabolic process4 (30.77%)0010200100
GO:0019219regulation of nucleobase-containing compound metabolic process4 (30.77%)0010200100
GO:0080090regulation of primary metabolic process4 (30.77%)0010200100
GO:0006355regulation of transcription, DNA-dependent4 (30.77%)0010200100
GO:0009628response to abiotic stimulus4 (30.77%)0000110101
GO:0006351transcription, DNA-templated4 (30.77%)0010200100
GO:0032502developmental process3 (23.08%)0001000101
GO:0009416response to light stimulus3 (23.08%)0000010101
GO:0009314response to radiation3 (23.08%)0000010101
GO:0006950response to stress3 (23.08%)0000110001
GO:0044763single-organism cellular process3 (23.08%)0001010100
GO:0044767single-organism developmental process3 (23.08%)0001000101
GO:0048856anatomical structure development2 (15.38%)0000000101
GO:0003006developmental process involved in reproduction2 (15.38%)0000000101
GO:0007275multicellular organismal development2 (15.38%)0000000101
GO:0032501multicellular organismal process2 (15.38%)0000000101
GO:0009648photoperiodism2 (15.38%)0000010100
GO:0009791post-embryonic development2 (15.38%)0000000101
GO:0000003reproduction2 (15.38%)0000000101
GO:0022414reproductive process2 (15.38%)0000000101
GO:0048608reproductive structure development2 (15.38%)0000000101
GO:0061458reproductive system development2 (15.38%)0000000101
GO:0042221response to chemical2 (15.38%)0100010000
GO:0009719response to endogenous stimulus2 (15.38%)0100010000
GO:0009725response to hormone2 (15.38%)0100010000
GO:0010033response to organic substance2 (15.38%)0100010000
GO:1901700response to oxygen-containing compound2 (15.38%)0100010000
GO:0009266response to temperature stimulus2 (15.38%)0000100001
GO:0048367shoot system development2 (15.38%)0000000101
GO:0044707single-multicellular organism process2 (15.38%)0000000101
GO:0044710single-organism metabolic process2 (15.38%)0100000100
GO:0048731system development2 (15.38%)0000000101
GO:0006401RNA catabolic process1 (7.69%)0000010000
GO:0048646anatomical structure formation involved in morphogenesis1 (7.69%)0000000100
GO:0009653anatomical structure morphogenesis1 (7.69%)0000000100
GO:0043481anthocyanin accumulation in tissues in response to UV light1 (7.69%)0000000001
GO:0019439aromatic compound catabolic process1 (7.69%)0000010000
GO:0015977carbon fixation1 (7.69%)0100000000
GO:0048440carpel development1 (7.69%)0000000001
GO:0009056catabolic process1 (7.69%)0000010000
GO:0007154cell communication1 (7.69%)0000010000
GO:0030154cell differentiation1 (7.69%)0001000000
GO:0044248cellular catabolic process1 (7.69%)0000010000
GO:0016043cellular component organization1 (7.69%)0000000100
GO:0071840cellular component organization or biogenesis1 (7.69%)0000000100
GO:0048869cellular developmental process1 (7.69%)0001000000
GO:0044265cellular macromolecule catabolic process1 (7.69%)0000010000
GO:0044270cellular nitrogen compound catabolic process1 (7.69%)0000010000
GO:0044267cellular protein metabolic process1 (7.69%)0000000100
GO:0006464cellular protein modification process1 (7.69%)0000000100
GO:0070887cellular response to chemical stimulus1 (7.69%)0000010000
GO:0071495cellular response to endogenous stimulus1 (7.69%)0000010000
GO:0032870cellular response to hormone stimulus1 (7.69%)0000010000
GO:0071395cellular response to jasmonic acid stimulus1 (7.69%)0000010000
GO:0071407cellular response to organic cyclic compound1 (7.69%)0000010000
GO:0071310cellular response to organic substance1 (7.69%)0000010000
GO:1901701cellular response to oxygen-containing compound1 (7.69%)0000010000
GO:0071446cellular response to salicylic acid stimulus1 (7.69%)0000010000
GO:0051716cellular response to stimulus1 (7.69%)0000010000
GO:0016568chromatin modification1 (7.69%)0000000100
GO:0006325chromatin organization1 (7.69%)0000000100
GO:0051276chromosome organization1 (7.69%)0000000100
GO:0016569covalent chromatin modification1 (7.69%)0000000100
GO:0006952defense response1 (7.69%)0000010000
GO:0042742defense response to bacterium1 (7.69%)0000010000
GO:0098542defense response to other organism1 (7.69%)0000010000
GO:0048437floral organ development1 (7.69%)0000000001
GO:0048438floral whorl development1 (7.69%)0000000001
GO:0009908flower development1 (7.69%)0000000001
GO:0048467gynoecium development1 (7.69%)0000000001
GO:0046700heterocycle catabolic process1 (7.69%)0000010000
GO:0043966histone H3 acetylation1 (7.69%)0000000100
GO:0043967histone H4 acetylation1 (7.69%)0000000100
GO:0016573histone acetylation1 (7.69%)0000000100
GO:0016570histone modification1 (7.69%)0000000100
GO:0009755hormone-mediated signaling pathway1 (7.69%)0000010000
GO:0018393internal peptidyl-lysine acetylation1 (7.69%)0000000100
GO:0006475internal protein amino acid acetylation1 (7.69%)0000000100
GO:0009867jasmonic acid mediated signaling pathway1 (7.69%)0000010000
GO:0048571long-day photoperiodism1 (7.69%)0000010000
GO:0006402mRNA catabolic process1 (7.69%)0000010000
GO:0016071mRNA metabolic process1 (7.69%)0000010000
GO:0009057macromolecule catabolic process1 (7.69%)0000010000
GO:0043412macromolecule modification1 (7.69%)0000000100
GO:0001763morphogenesis of a branching structure1 (7.69%)0000000100
GO:0051704multi-organism process1 (7.69%)0000010000
GO:0000956nuclear-transcribed mRNA catabolic process1 (7.69%)0000010000
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay1 (7.69%)0000010000
GO:0034655nucleobase-containing compound catabolic process1 (7.69%)0000010000
GO:0048513organ development1 (7.69%)0000000001
GO:0006996organelle organization1 (7.69%)0000000100
GO:1901361organic cyclic compound catabolic process1 (7.69%)0000010000
GO:1901575organic substance catabolic process1 (7.69%)0000010000
GO:0018193peptidyl-amino acid modification1 (7.69%)0000000100
GO:0018394peptidyl-lysine acetylation1 (7.69%)0000000100
GO:0018205peptidyl-lysine modification1 (7.69%)0000000100
GO:0048573photoperiodism, flowering1 (7.69%)0000000100
GO:0048827phyllome development1 (7.69%)0000000001
GO:0043476pigment accumulation1 (7.69%)0000000001
GO:0043478pigment accumulation in response to UV light1 (7.69%)0000000001
GO:0043480pigment accumulation in tissues1 (7.69%)0000000001
GO:0043479pigment accumulation in tissues in response to UV light1 (7.69%)0000000001
GO:0043473pigmentation1 (7.69%)0000000001
GO:0048569post-embryonic organ development1 (7.69%)0000000001
GO:0006473protein acetylation1 (7.69%)0000000100
GO:0043543protein acylation1 (7.69%)0000000100
GO:0019538protein metabolic process1 (7.69%)0000000100
GO:0036211protein modification process1 (7.69%)0000000100
GO:0009411response to UV1 (7.69%)0000000001
GO:0009737response to abscisic acid1 (7.69%)0100000000
GO:0097305response to alcohol1 (7.69%)0100000000
GO:0009617response to bacterium1 (7.69%)0000010000
GO:0009607response to biotic stimulus1 (7.69%)0000010000
GO:0046686response to cadmium ion1 (7.69%)0100000000
GO:0009409response to cold1 (7.69%)0000000001
GO:0009605response to external stimulus1 (7.69%)0000000001
GO:0009408response to heat1 (7.69%)0000100000
GO:0010035response to inorganic substance1 (7.69%)0100000000
GO:0009753response to jasmonic acid1 (7.69%)0000010000
GO:0033993response to lipid1 (7.69%)0100000000
GO:0010038response to metal ion1 (7.69%)0100000000
GO:0014070response to organic cyclic compound1 (7.69%)0000010000
GO:0051707response to other organism1 (7.69%)0000010000
GO:0009751response to salicylic acid1 (7.69%)0000010000
GO:0009611response to wounding1 (7.69%)0000010000
GO:0009863salicylic acid mediated signaling pathway1 (7.69%)0000010000
GO:0010223secondary shoot formation1 (7.69%)0000000100
GO:0010346shoot axis formation1 (7.69%)0000000100
GO:0010016shoot system morphogenesis1 (7.69%)0000000100
GO:0007165signal transduction1 (7.69%)0000010000
GO:0023052signaling1 (7.69%)0000010000
GO:0044702single organism reproductive process1 (7.69%)0000000001
GO:0044700single organism signaling1 (7.69%)0000010000
GO:0010228vegetative to reproductive phase transition of meristem1 (7.69%)0000000100
GO:0010048vernalization response1 (7.69%)0000000001

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell6 (46.15%)0100120101
GO:0044464cell part6 (46.15%)0100120101
GO:0005622intracellular5 (38.46%)0100110101
GO:0043231intracellular membrane-bounded organelle5 (38.46%)0100110101
GO:0043229intracellular organelle5 (38.46%)0100110101
GO:0044424intracellular part5 (38.46%)0100110101
GO:0043227membrane-bounded organelle5 (38.46%)0100110101
GO:0043226organelle5 (38.46%)0100110101
GO:0005634nucleus4 (30.77%)0000110101
GO:0030054cell junction3 (23.08%)0000010101
GO:0005911cell-cell junction3 (23.08%)0000010101
GO:0009506plasmodesma3 (23.08%)0000010101
GO:0055044symplast3 (23.08%)0000010101
GO:0071944cell periphery2 (15.38%)0100010000
GO:0043232intracellular non-membrane-bounded organelle2 (15.38%)0100010000
GO:0044446intracellular organelle part2 (15.38%)0100010000
GO:0016020membrane2 (15.38%)0100010000
GO:0043228non-membrane-bounded organelle2 (15.38%)0100010000
GO:0044422organelle part2 (15.38%)0100010000
GO:0048046apoplast1 (7.69%)0100000000
GO:0005618cell wall1 (7.69%)0100000000
GO:0009507chloroplast1 (7.69%)0100000000
GO:0009941chloroplast envelope1 (7.69%)0100000000
GO:0044434chloroplast part1 (7.69%)0100000000
GO:0009570chloroplast stroma1 (7.69%)0100000000
GO:0009534chloroplast thylakoid1 (7.69%)0100000000
GO:0009535chloroplast thylakoid membrane1 (7.69%)0100000000
GO:0005737cytoplasm1 (7.69%)0100000000
GO:0044444cytoplasmic part1 (7.69%)0100000000
GO:0005829cytosol1 (7.69%)0100000000
GO:0044445cytosolic part1 (7.69%)0100000000
GO:0022626cytosolic ribosome1 (7.69%)0100000000
GO:0031975envelope1 (7.69%)0100000000
GO:0030312external encapsulating structure1 (7.69%)0100000000
GO:0005576extracellular region1 (7.69%)0100000000
GO:0070013intracellular organelle lumen1 (7.69%)0000010000
GO:0032991macromolecular complex1 (7.69%)0100000000
GO:0031974membrane-enclosed lumen1 (7.69%)0000010000
GO:0031981nuclear lumen1 (7.69%)0000010000
GO:0044428nuclear part1 (7.69%)0000010000
GO:0005730nucleolus1 (7.69%)0000010000
GO:0031967organelle envelope1 (7.69%)0100000000
GO:0043233organelle lumen1 (7.69%)0000010000
GO:0031984organelle subcompartment1 (7.69%)0100000000
GO:0034357photosynthetic membrane1 (7.69%)0100000000
GO:0005886plasma membrane1 (7.69%)0000010000
GO:0009536plastid1 (7.69%)0100000000
GO:0009526plastid envelope1 (7.69%)0100000000
GO:0044435plastid part1 (7.69%)0100000000
GO:0009532plastid stroma1 (7.69%)0100000000
GO:0031976plastid thylakoid1 (7.69%)0100000000
GO:0055035plastid thylakoid membrane1 (7.69%)0100000000
GO:0010287plastoglobule1 (7.69%)0100000000
GO:0030529ribonucleoprotein complex1 (7.69%)0100000000
GO:0005840ribosome1 (7.69%)0100000000
GO:0009579thylakoid1 (7.69%)0100000000
GO:0042651thylakoid membrane1 (7.69%)0100000000
GO:0044436thylakoid part1 (7.69%)0100000000