PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_670
Name: E2Fb;E2Fc;E2Fd;E2Fe;E2Fa
Description: The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants. Arabidopsis E2F1 binds a sequence present in the promoter of S-phase-regulated gene AtCDC6 and is a member of a multigene family with differential activities

#Associated genes: 7
#Associated InterPro terms: 20

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InterPro	Description	#Associated genes	ptr	ppe	sly	stu
IPR000432	DNA mismatch repair protein MutS, C-terminal	2 (28.57%)	2	0	0	0
IPR016151	DNA mismatch repair protein MutS, N-terminal	2 (28.57%)	2	0	0	0
IPR007696	DNA mismatch repair protein MutS, core	2 (28.57%)	2	0	0	0
IPR015536	DNA mismatch repair protein MutS-homologue MSH6	2 (28.57%)	2	0	0	0
IPR007695	DNA mismatch repair protein MutS-like, N-terminal	2 (28.57%)	2	0	0	0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	2 (28.57%)	2	0	0	0
IPR002999	Tudor domain	2 (28.57%)	2	0	0	0
IPR005144	ATP-cone	1 (14.29%)	0	0	0	1
IPR004877	Cytochrome b561, eukaryote	1 (14.29%)	0	1	0	0
IPR006593	Cytochrome b561/ferric reductase transmembrane	1 (14.29%)	0	1	0	0
IPR007861	DNA mismatch repair protein MutS, clamp	1 (14.29%)	1	0	0	0
IPR007860	DNA mismatch repair protein MutS, connector domain	1 (14.29%)	1	0	0	0
IPR005018	DOMON domain	1 (14.29%)	0	1	0	0
IPR001623	DnaJ domain	1 (14.29%)	0	0	1	0
IPR005647	Meiotic nuclear division protein 1	1 (14.29%)	0	1	0	0
IPR001750	NADH:ubiquinone/plastoquinone oxidoreductase	1 (14.29%)	1	0	0	0
IPR008926	Ribonucleotide reductase R1 subunit, N-terminal	1 (14.29%)	0	0	0	1
IPR000788	Ribonucleotide reductase large subunit, C-terminal	1 (14.29%)	0	0	0	1
IPR013509	Ribonucleotide reductase large subunit, N-terminal	1 (14.29%)	0	0	0	1
IPR013346	Ribonucleotide reductase, class I , alpha subunit	1 (14.29%)	0	0	0	1