PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_610
Name: GATA-2;GATA-4;GATA-3;GATA-1
Description: Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics

#Associated genes: 127
#Associated MapMan terms: 71

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	29 (22.83%)	1	1	1	3	9	4	2	8
27.3	RNA.regulation of transcription	20 (15.75%)	0	1	1	1	6	3	1	7
27.4	RNA.RNA binding	9 (7.09%)	1	0	0	2	3	1	1	1
29	protein	7 (5.51%)	0	0	0	2	2	0	0	3
30	signalling	7 (5.51%)	1	0	1	0	3	1	1	0
34	transport	7 (5.51%)	0	1	0	5	0	1	0	0
17	hormone metabolism	5 (3.94%)	0	0	0	1	2	1	0	1
26	misc	5 (3.94%)	1	0	1	2	0	0	1	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	4 (3.15%)	0	1	0	0	0	0	1	2
29.4	protein.postranslational modification	4 (3.15%)	0	0	0	0	2	0	0	2
30.5	signalling.G-proteins	4 (3.15%)	0	0	1	0	1	1	1	0
31	cell	4 (3.15%)	0	0	1	0	3	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	3 (2.36%)	0	0	0	2	0	0	1	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	3 (2.36%)	0	0	0	0	1	1	0	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	3 (2.36%)	0	0	0	1	2	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	3 (2.36%)	0	0	0	1	1	1	0	0
31.1	cell.organisation	3 (2.36%)	0	0	1	0	2	0	0	0
33	development	3 (2.36%)	0	0	0	0	0	1	0	2
33.99	development.unspecified	3 (2.36%)	0	0	0	0	0	1	0	2
34.12	transport.metal	3 (2.36%)	0	0	0	2	0	1	0	0
1	PS	2 (1.57%)	0	0	0	1	0	0	1	0
1.1	PS.lightreaction	2 (1.57%)	0	0	0	1	0	0	1	0
17.1	hormone metabolism.abscisic acid	2 (1.57%)	0	0	0	0	2	0	0	0
17.1.2	hormone metabolism.abscisic acid.signal transduction	2 (1.57%)	0	0	0	0	2	0	0	0
17.4	hormone metabolism.cytokinin	2 (1.57%)	0	0	0	0	0	1	0	1
17.4.2	hormone metabolism.cytokinin.signal transduction	2 (1.57%)	0	0	0	0	0	1	0	1
20	stress	2 (1.57%)	0	0	0	0	1	0	0	1
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	2 (1.57%)	0	0	1	0	0	1	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	2 (1.57%)	0	0	1	0	1	0	0	0
29.5.11.4.5.2	protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ	2 (1.57%)	0	0	0	0	2	0	0	0
30.3	signalling.calcium	2 (1.57%)	0	0	0	0	2	0	0	0
34.3	transport.amino acids	2 (1.57%)	0	0	0	2	0	0	0	0
1.1.1	PS.lightreaction.photosystem II	1 (0.79%)	0	0	0	0	0	0	1	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	1 (0.79%)	0	0	0	0	0	0	1	0
1.1.5	PS.lightreaction.other electron carrier (ox/red)	1 (0.79%)	0	0	0	1	0	0	0	0
1.1.5.2	PS.lightreaction.other electron carrier (ox/red).ferredoxin	1 (0.79%)	0	0	0	1	0	0	0	0
9	mitochondrial electron transport / ATP synthesis	1 (0.79%)	0	0	0	0	0	0	1	0
11	lipid metabolism	1 (0.79%)	0	1	0	0	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.79%)	0	1	0	0	0	0	0	0
11.9.4	lipid metabolism.lipid degradation.beta-oxidation	1 (0.79%)	0	1	0	0	0	0	0	0
11.9.4.2	lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH	1 (0.79%)	0	1	0	0	0	0	0	0
17.1.1.1.10	hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase	1 (0.79%)	0	0	0	0	1	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (0.79%)	0	0	0	1	0	0	0	0
20.2.99	stress.abiotic.unspecified	1 (0.79%)	0	0	0	0	1	0	0	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	1 (0.79%)	0	0	0	0	0	0	1	0
15	metal handling	1 (0.79%)	0	0	0	0	0	1	0	0
15.2	metal handling.binding, chelation and storage	1 (0.79%)	0	0	0	0	0	1	0	0
17.2	hormone metabolism.auxin	1 (0.79%)	0	0	0	1	0	0	0	0
20.2	stress.abiotic	1 (0.79%)	0	0	0	0	1	0	0	0
26.12	misc.peroxidases	1 (0.79%)	0	0	1	0	0	0	0	0
26.23	misc.rhodanese	1 (0.79%)	1	0	0	0	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (0.79%)	0	0	0	0	0	1	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.79%)	0	0	0	0	0	0	0	1
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.79%)	0	0	0	0	0	0	0	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.79%)	0	0	0	0	1	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.79%)	0	0	0	0	1	0	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.79%)	0	0	0	0	0	0	0	1
27.3.64	RNA.regulation of transcription.PHOR1	1 (0.79%)	0	0	0	0	1	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (0.79%)	0	0	0	0	0	0	0	1
29.2	protein.synthesis	1 (0.79%)	0	0	0	0	0	0	0	1
29.2.1.1.1.2.33	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L33	1 (0.79%)	0	0	0	0	1	0	0	0
29.2.3	protein.synthesis.initiation	1 (0.79%)	0	0	0	0	0	0	0	1
29.3	protein.targeting	1 (0.79%)	0	0	0	1	0	0	0	0
29.3.1	protein.targeting.nucleus	1 (0.79%)	0	0	0	1	0	0	0	0
29.5	protein.degradation	1 (0.79%)	0	0	0	1	0	0	0	0
29.5.7	protein.degradation.metalloprotease	1 (0.79%)	0	0	0	1	0	0	0	0
30.1	signalling.in sugar and nutrient physiology	1 (0.79%)	1	0	0	0	0	0	0	0
31.3	cell.cycle	1 (0.79%)	0	0	0	0	1	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.79%)	0	0	0	1	0	0	0	0
34.21	transport.calcium	1 (0.79%)	0	1	0	0	0	0	0	0
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	1 (0.79%)	0	0	0	0	0	0	1	0