PLAZA 3.0 Dicots : Binding Sites

Gene Ontology terms associated with a binding site

Binding site: Motif_608
Name: OBP-1-4-5 BS in GST6
Description: OBP1, 4, and 5 (OBF binding protein) binding site found in the Arabidopsis GST6 gene promoter; Located between -398 and -388; OBP1 is able to stimulate the binding of OBF proteins to the GST6 promoter;Overexpression of OBP3 lead to severe growth defect with altered root development and yellowish leaves; All OBP proteins contain transcriptional activation domains in their C-term. region; Dof protein play important roles in plant growth and development;The promoter of a H202-inducible, Arabidopsis glutathione S-transferase gene contains closely linked OBF- and OBP1-binding RT

#Associated genes: 6
#Associated GO terms: 80

Biological Process
Molecular Function
Cellular Component

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Molecular Function (back to top)

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GO	Description	#Associated genes	egr	gma
GO:0005488	binding	4 (66.67%)	0	4
GO:1901363	heterocyclic compound binding	3 (50.00%)	0	3
GO:0003676	nucleic acid binding	3 (50.00%)	0	3
GO:0097159	organic cyclic compound binding	3 (50.00%)	0	3
GO:1901265	nucleoside phosphate binding	2 (33.33%)	0	2
GO:0000166	nucleotide binding	2 (33.33%)	0	2
GO:0036094	small molecule binding	2 (33.33%)	0	2
GO:0003677	DNA binding	1 (16.67%)	0	1
GO:0003824	catalytic activity	1 (16.67%)	1	0
GO:0003682	chromatin binding	1 (16.67%)	0	1
GO:0008168	methyltransferase activity	1 (16.67%)	1	0
GO:0005515	protein binding	1 (16.67%)	0	1
GO:0046983	protein dimerization activity	1 (16.67%)	0	1
GO:0016740	transferase activity	1 (16.67%)	1	0
GO:0016741	transferase activity, transferring one-carbon groups	1 (16.67%)	1	0

Biological Process (back to top)

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GO	Description	#Associated genes	gma
GO:0032774	RNA biosynthetic process	1 (16.67%)	1
GO:0016070	RNA metabolic process	1 (16.67%)	1
GO:0019438	aromatic compound biosynthetic process	1 (16.67%)	1
GO:0065007	biological regulation	1 (16.67%)	1
GO:0009058	biosynthetic process	1 (16.67%)	1
GO:0006725	cellular aromatic compound metabolic process	1 (16.67%)	1
GO:0044249	cellular biosynthetic process	1 (16.67%)	1
GO:0034645	cellular macromolecule biosynthetic process	1 (16.67%)	1
GO:0044260	cellular macromolecule metabolic process	1 (16.67%)	1
GO:0044237	cellular metabolic process	1 (16.67%)	1
GO:0044271	cellular nitrogen compound biosynthetic process	1 (16.67%)	1
GO:0034641	cellular nitrogen compound metabolic process	1 (16.67%)	1
GO:0009987	cellular process	1 (16.67%)	1
GO:0010467	gene expression	1 (16.67%)	1
GO:0018130	heterocycle biosynthetic process	1 (16.67%)	1
GO:0046483	heterocycle metabolic process	1 (16.67%)	1
GO:0009059	macromolecule biosynthetic process	1 (16.67%)	1
GO:0043170	macromolecule metabolic process	1 (16.67%)	1
GO:0008152	metabolic process	1 (16.67%)	1
GO:0006807	nitrogen compound metabolic process	1 (16.67%)	1
GO:0090304	nucleic acid metabolic process	1 (16.67%)	1
GO:0034654	nucleobase-containing compound biosynthetic process	1 (16.67%)	1
GO:0006139	nucleobase-containing compound metabolic process	1 (16.67%)	1
GO:1901362	organic cyclic compound biosynthetic process	1 (16.67%)	1
GO:1901360	organic cyclic compound metabolic process	1 (16.67%)	1
GO:1901576	organic substance biosynthetic process	1 (16.67%)	1
GO:0071704	organic substance metabolic process	1 (16.67%)	1
GO:0044238	primary metabolic process	1 (16.67%)	1
GO:2001141	regulation of RNA biosynthetic process	1 (16.67%)	1
GO:0051252	regulation of RNA metabolic process	1 (16.67%)	1
GO:0050789	regulation of biological process	1 (16.67%)	1
GO:0009889	regulation of biosynthetic process	1 (16.67%)	1
GO:0031326	regulation of cellular biosynthetic process	1 (16.67%)	1
GO:2000112	regulation of cellular macromolecule biosynthetic process	1 (16.67%)	1
GO:0031323	regulation of cellular metabolic process	1 (16.67%)	1
GO:0050794	regulation of cellular process	1 (16.67%)	1
GO:0010468	regulation of gene expression	1 (16.67%)	1
GO:0010556	regulation of macromolecule biosynthetic process	1 (16.67%)	1
GO:0060255	regulation of macromolecule metabolic process	1 (16.67%)	1
GO:0019222	regulation of metabolic process	1 (16.67%)	1
GO:0051171	regulation of nitrogen compound metabolic process	1 (16.67%)	1
GO:0019219	regulation of nucleobase-containing compound metabolic process	1 (16.67%)	1
GO:0080090	regulation of primary metabolic process	1 (16.67%)	1
GO:0006355	regulation of transcription, DNA-dependent	1 (16.67%)	1
GO:0006351	transcription, DNA-templated	1 (16.67%)	1

Cellular Component (back to top)

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GO	Description	#Associated genes	gma
GO:0005623	cell	2 (33.33%)	2
GO:0044464	cell part	2 (33.33%)	2
GO:0005622	intracellular	2 (33.33%)	2
GO:0043231	intracellular membrane-bounded organelle	2 (33.33%)	2
GO:0043229	intracellular organelle	2 (33.33%)	2
GO:0070013	intracellular organelle lumen	2 (33.33%)	2
GO:0044446	intracellular organelle part	2 (33.33%)	2
GO:0044424	intracellular part	2 (33.33%)	2
GO:0043227	membrane-bounded organelle	2 (33.33%)	2
GO:0031974	membrane-enclosed lumen	2 (33.33%)	2
GO:0016604	nuclear body	2 (33.33%)	2
GO:0031981	nuclear lumen	2 (33.33%)	2
GO:0044428	nuclear part	2 (33.33%)	2
GO:0016607	nuclear speck	2 (33.33%)	2
GO:0005654	nucleoplasm	2 (33.33%)	2
GO:0044451	nucleoplasm part	2 (33.33%)	2
GO:0005634	nucleus	2 (33.33%)	2
GO:0043226	organelle	2 (33.33%)	2
GO:0043233	organelle lumen	2 (33.33%)	2
GO:0044422	organelle part	2 (33.33%)	2