Gene Ontology terms associated with a binding site

Binding site
Motif_598
Name
SORLIP3AT
Description
one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; See also all SORLIPs and also all SORLREPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data
#Associated genes
44
#Associated GO terms
671
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell26 (59.09%)41111032004
GO:0044464cell part26 (59.09%)41111032004
GO:0005622intracellular21 (47.73%)4110822003
GO:0044424intracellular part21 (47.73%)4110822003
GO:0043231intracellular membrane-bounded organelle19 (43.18%)3110821003
GO:0043229intracellular organelle19 (43.18%)3110821003
GO:0043227membrane-bounded organelle19 (43.18%)3110821003
GO:0043226organelle19 (43.18%)3110821003
GO:0005737cytoplasm12 (27.27%)3100601001
GO:0044444cytoplasmic part10 (22.73%)2100501001
GO:0016020membrane10 (22.73%)1001411002
GO:0005634nucleus10 (22.73%)1110320002
GO:0005576extracellular region8 (18.18%)2000600000
GO:0032991macromolecular complex8 (18.18%)2110301000
GO:0048046apoplast7 (15.91%)1000600000
GO:0071944cell periphery7 (15.91%)1001310001
GO:0044446intracellular organelle part7 (15.91%)1110300001
GO:0044422organelle part7 (15.91%)1110300001
GO:0005829cytosol6 (13.64%)1100400000
GO:0031975envelope6 (13.64%)1100300001
GO:0031967organelle envelope6 (13.64%)1100300001
GO:0009507chloroplast5 (11.36%)1000300001
GO:0009941chloroplast envelope5 (11.36%)1000300001
GO:0044434chloroplast part5 (11.36%)1000300001
GO:0009534chloroplast thylakoid5 (11.36%)1000300001
GO:0031984organelle subcompartment5 (11.36%)1000300001
GO:0005886plasma membrane5 (11.36%)1001110001
GO:0009536plastid5 (11.36%)1000300001
GO:0009526plastid envelope5 (11.36%)1000300001
GO:0044435plastid part5 (11.36%)1000300001
GO:0031976plastid thylakoid5 (11.36%)1000300001
GO:0009579thylakoid5 (11.36%)1000300001
GO:1902494catalytic complex4 (9.09%)1110001000
GO:0009570chloroplast stroma4 (9.09%)1000300000
GO:0044445cytosolic part4 (9.09%)1000300000
GO:0022626cytosolic ribosome4 (9.09%)1000300000
GO:0043232intracellular non-membrane-bounded organelle4 (9.09%)1000300000
GO:0043228non-membrane-bounded organelle4 (9.09%)1000300000
GO:0009532plastid stroma4 (9.09%)1000300000
GO:0010287plastoglobule4 (9.09%)1000300000
GO:0043234protein complex4 (9.09%)1110001000
GO:0030529ribonucleoprotein complex4 (9.09%)1000300000
GO:0005840ribosome4 (9.09%)1000300000
GO:0031977thylakoid lumen4 (9.09%)1000300000
GO:0044436thylakoid part4 (9.09%)1000300000
GO:0005618cell wall3 (6.82%)0000300000
GO:0030312external encapsulating structure3 (6.82%)0000300000
GO:0000151ubiquitin ligase complex3 (6.82%)1100001000
GO:0080008Cul4-RING ubiquitin ligase complex2 (4.55%)1100000000
GO:0005794Golgi apparatus2 (4.55%)0000101000
GO:0031461cullin-RING ubiquitin ligase complex2 (4.55%)1100000000
GO:0044428nuclear part2 (4.55%)0110000000
GO:0000418DNA-directed RNA polymerase IV complex1 (2.27%)0010000000
GO:0000428DNA-directed RNA polymerase complex1 (2.27%)0010000000
GO:0030880RNA polymerase complex1 (2.27%)0010000000
GO:0030054cell junction1 (2.27%)0000100000
GO:0005911cell-cell junction1 (2.27%)0000100000
GO:0012505endomembrane system1 (2.27%)0100000000
GO:0005783endoplasmic reticulum1 (2.27%)1000000000
GO:0005768endosome1 (2.27%)0000001000
GO:0016021integral to membrane1 (2.27%)0000000001
GO:0070013intracellular organelle lumen1 (2.27%)0010000000
GO:0031224intrinsic to membrane1 (2.27%)0000000001
GO:0044425membrane part1 (2.27%)0000000001
GO:0031974membrane-enclosed lumen1 (2.27%)0010000000
GO:0042579microbody1 (2.27%)0000100000
GO:0005739mitochondrion1 (2.27%)0000100000
GO:0055029nuclear DNA-directed RNA polymerase complex1 (2.27%)0010000000
GO:0005635nuclear envelope1 (2.27%)0100000000
GO:0031981nuclear lumen1 (2.27%)0010000000
GO:0005654nucleoplasm1 (2.27%)0010000000
GO:0044451nucleoplasm part1 (2.27%)0010000000
GO:0043233organelle lumen1 (2.27%)0010000000
GO:0005777peroxisome1 (2.27%)0000100000
GO:0009505plant-type cell wall1 (2.27%)0000100000
GO:0009506plasmodesma1 (2.27%)0000100000
GO:0055044symplast1 (2.27%)0000100000
GO:0005802trans-Golgi network1 (2.27%)0000001000
GO:1990234transferase complex1 (2.27%)0010000000
GO:0005773vacuole1 (2.27%)0000100000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process25 (56.82%)20311051102
GO:0008152metabolic process24 (54.55%)20311151001
GO:0044237cellular metabolic process22 (50.00%)2031951001
GO:0071704organic substance metabolic process22 (50.00%)2031951001
GO:0044238primary metabolic process21 (47.73%)2031851001
GO:0044260cellular macromolecule metabolic process18 (40.91%)2031551001
GO:0043170macromolecule metabolic process18 (40.91%)2031551001
GO:0034641cellular nitrogen compound metabolic process17 (38.64%)1021750001
GO:0006807nitrogen compound metabolic process17 (38.64%)1021750001
GO:0006725cellular aromatic compound metabolic process16 (36.36%)1021650001
GO:0046483heterocycle metabolic process16 (36.36%)1021650001
GO:0006139nucleobase-containing compound metabolic process16 (36.36%)1021650001
GO:1901360organic cyclic compound metabolic process16 (36.36%)1021650001
GO:0044699single-organism process16 (36.36%)2021621101
GO:0050896response to stimulus14 (31.82%)3021520001
GO:0090304nucleic acid metabolic process13 (29.55%)1021350001
GO:0044763single-organism cellular process13 (29.55%)1021520101
GO:0032774RNA biosynthetic process11 (25.00%)1010350001
GO:0016070RNA metabolic process11 (25.00%)1010350001
GO:0019438aromatic compound biosynthetic process11 (25.00%)1010350001
GO:0065007biological regulation11 (25.00%)1010350001
GO:0009058biosynthetic process11 (25.00%)1010350001
GO:0044249cellular biosynthetic process11 (25.00%)1010350001
GO:0034645cellular macromolecule biosynthetic process11 (25.00%)1010350001
GO:0044271cellular nitrogen compound biosynthetic process11 (25.00%)1010350001
GO:0010467gene expression11 (25.00%)1010350001
GO:0018130heterocycle biosynthetic process11 (25.00%)1010350001
GO:0009059macromolecule biosynthetic process11 (25.00%)1010350001
GO:0034654nucleobase-containing compound biosynthetic process11 (25.00%)1010350001
GO:1901362organic cyclic compound biosynthetic process11 (25.00%)1010350001
GO:1901576organic substance biosynthetic process11 (25.00%)1010350001
GO:2001141regulation of RNA biosynthetic process11 (25.00%)1010350001
GO:0051252regulation of RNA metabolic process11 (25.00%)1010350001
GO:0050789regulation of biological process11 (25.00%)1010350001
GO:0009889regulation of biosynthetic process11 (25.00%)1010350001
GO:0031326regulation of cellular biosynthetic process11 (25.00%)1010350001
GO:2000112regulation of cellular macromolecule biosynthetic process11 (25.00%)1010350001
GO:0031323regulation of cellular metabolic process11 (25.00%)1010350001
GO:0050794regulation of cellular process11 (25.00%)1010350001
GO:0010468regulation of gene expression11 (25.00%)1010350001
GO:0010556regulation of macromolecule biosynthetic process11 (25.00%)1010350001
GO:0060255regulation of macromolecule metabolic process11 (25.00%)1010350001
GO:0019222regulation of metabolic process11 (25.00%)1010350001
GO:0051171regulation of nitrogen compound metabolic process11 (25.00%)1010350001
GO:0019219regulation of nucleobase-containing compound metabolic process11 (25.00%)1010350001
GO:0080090regulation of primary metabolic process11 (25.00%)1010350001
GO:0006355regulation of transcription, DNA-dependent11 (25.00%)1010350001
GO:0006351transcription, DNA-templated11 (25.00%)1010350001
GO:0042221response to chemical10 (22.73%)2010520000
GO:0010033response to organic substance9 (20.45%)1010520000
GO:1901700response to oxygen-containing compound9 (20.45%)2000520000
GO:0044710single-organism metabolic process9 (20.45%)1021500000
GO:0051716cellular response to stimulus8 (18.18%)1021220000
GO:0009056catabolic process7 (15.91%)1000600000
GO:0009719response to endogenous stimulus7 (15.91%)1000420000
GO:0009725response to hormone7 (15.91%)1000420000
GO:0005975carbohydrate metabolic process6 (13.64%)1000500000
GO:0070887cellular response to chemical stimulus6 (13.64%)1010220000
GO:1901564organonitrogen compound metabolic process6 (13.64%)1010400000
GO:0055114oxidation-reduction process6 (13.64%)1000500000
GO:0006796phosphate-containing compound metabolic process6 (13.64%)2010300000
GO:0006793phosphorus metabolic process6 (13.64%)2010300000
GO:0009628response to abiotic stimulus6 (13.64%)2000120001
GO:0033993response to lipid6 (13.64%)1000320000
GO:0048856anatomical structure development5 (11.36%)2000120000
GO:0032502developmental process5 (11.36%)2000120000
GO:0007275multicellular organismal development5 (11.36%)2000120000
GO:0032501multicellular organismal process5 (11.36%)2000120000
GO:1901575organic substance catabolic process5 (11.36%)1000400000
GO:0009416response to light stimulus5 (11.36%)2000020001
GO:0009314response to radiation5 (11.36%)2000020001
GO:0006950response to stress5 (11.36%)1011200000
GO:0044707single-multicellular organism process5 (11.36%)2000120000
GO:0044767single-organism developmental process5 (11.36%)2000120000
GO:0048731system development5 (11.36%)2000120000
GO:0006739NADP metabolic process4 (9.09%)1000300000
GO:0006740NADPH regeneration4 (9.09%)1000300000
GO:0016052carbohydrate catabolic process4 (9.09%)1000300000
GO:0007154cell communication4 (9.09%)0010120000
GO:0030154cell differentiation4 (9.09%)1000120000
GO:0016043cellular component organization4 (9.09%)1010100100
GO:0071840cellular component organization or biogenesis4 (9.09%)1010100100
GO:0048869cellular developmental process4 (9.09%)1000120000
GO:0044267cellular protein metabolic process4 (9.09%)2010001000
GO:0006464cellular protein modification process4 (9.09%)2010001000
GO:0071310cellular response to organic substance4 (9.09%)0010120000
GO:1901701cellular response to oxygen-containing compound4 (9.09%)1000120000
GO:0033554cellular response to stress4 (9.09%)1011100000
GO:0006732coenzyme metabolic process4 (9.09%)1000300000
GO:0051186cofactor metabolic process4 (9.09%)1000300000
GO:0003006developmental process involved in reproduction4 (9.09%)1000120000
GO:0006091generation of precursor metabolites and energy4 (9.09%)1000300000
GO:0006007glucose catabolic process4 (9.09%)1000300000
GO:0006006glucose metabolic process4 (9.09%)1000300000
GO:0006096glycolysis4 (9.09%)1000300000
GO:0019320hexose catabolic process4 (9.09%)1000300000
GO:0019318hexose metabolic process4 (9.09%)1000300000
GO:0043412macromolecule modification4 (9.09%)2010001000
GO:0046365monosaccharide catabolic process4 (9.09%)1000300000
GO:0005996monosaccharide metabolic process4 (9.09%)1000300000
GO:0046496nicotinamide nucleotide metabolic process4 (9.09%)1000300000
GO:0055086nucleobase-containing small molecule metabolic process4 (9.09%)1000300000
GO:0006753nucleoside phosphate metabolic process4 (9.09%)1000300000
GO:0009117nucleotide metabolic process4 (9.09%)1000300000
GO:0006996organelle organization4 (9.09%)1010100100
GO:0019637organophosphate metabolic process4 (9.09%)1000300000
GO:0006733oxidoreduction coenzyme metabolic process4 (9.09%)1000300000
GO:0006098pentose-phosphate shunt4 (9.09%)1000300000
GO:0051254positive regulation of RNA metabolic process4 (9.09%)1000120000
GO:0048518positive regulation of biological process4 (9.09%)1000120000
GO:0009891positive regulation of biosynthetic process4 (9.09%)1000120000
GO:0031328positive regulation of cellular biosynthetic process4 (9.09%)1000120000
GO:0031325positive regulation of cellular metabolic process4 (9.09%)1000120000
GO:0048522positive regulation of cellular process4 (9.09%)1000120000
GO:0010628positive regulation of gene expression4 (9.09%)1000120000
GO:0010557positive regulation of macromolecule biosynthetic process4 (9.09%)1000120000
GO:0010604positive regulation of macromolecule metabolic process4 (9.09%)1000120000
GO:0009893positive regulation of metabolic process4 (9.09%)1000120000
GO:0051173positive regulation of nitrogen compound metabolic process4 (9.09%)1000120000
GO:0045935positive regulation of nucleobase-containing compound metabolic process4 (9.09%)1000120000
GO:0045893positive regulation of transcription, DNA-dependent4 (9.09%)1000120000
GO:0009791post-embryonic development4 (9.09%)1000120000
GO:0019538protein metabolic process4 (9.09%)2010001000
GO:0036211protein modification process4 (9.09%)2010001000
GO:0019362pyridine nucleotide metabolic process4 (9.09%)1000300000
GO:0072524pyridine-containing compound metabolic process4 (9.09%)1000300000
GO:0000003reproduction4 (9.09%)1000120000
GO:0022414reproductive process4 (9.09%)1000120000
GO:0048608reproductive structure development4 (9.09%)1000120000
GO:0061458reproductive system development4 (9.09%)1000120000
GO:0009737response to abscisic acid4 (9.09%)1000300000
GO:0097305response to alcohol4 (9.09%)1000300000
GO:0046686response to cadmium ion4 (9.09%)1000300000
GO:0010035response to inorganic substance4 (9.09%)1000300000
GO:0010038response to metal ion4 (9.09%)1000300000
GO:0023052signaling4 (9.09%)0010120000
GO:0044700single organism signaling4 (9.09%)0010120000
GO:0044724single-organism carbohydrate catabolic process4 (9.09%)1000300000
GO:0044723single-organism carbohydrate metabolic process4 (9.09%)1000300000
GO:0044712single-organism catabolic process4 (9.09%)1000300000
GO:0044281small molecule metabolic process4 (9.09%)1000300000
GO:0006396RNA processing3 (6.82%)1010000001
GO:0044262cellular carbohydrate metabolic process3 (6.82%)1000200000
GO:0044248cellular catabolic process3 (6.82%)1000200000
GO:0006073cellular glucan metabolic process3 (6.82%)1000200000
GO:0044264cellular polysaccharide metabolic process3 (6.82%)1000200000
GO:0051234establishment of localization3 (6.82%)1000001001
GO:0010154fruit development3 (6.82%)0000120000
GO:0044042glucan metabolic process3 (6.82%)1000200000
GO:0051179localization3 (6.82%)1000001001
GO:0051253negative regulation of RNA metabolic process3 (6.82%)0010100001
GO:0048519negative regulation of biological process3 (6.82%)0010100001
GO:0009890negative regulation of biosynthetic process3 (6.82%)0010100001
GO:0031327negative regulation of cellular biosynthetic process3 (6.82%)0010100001
GO:2000113negative regulation of cellular macromolecule biosynthetic process3 (6.82%)0010100001
GO:0031324negative regulation of cellular metabolic process3 (6.82%)0010100001
GO:0048523negative regulation of cellular process3 (6.82%)0010100001
GO:0010629negative regulation of gene expression3 (6.82%)0010100001
GO:0010558negative regulation of macromolecule biosynthetic process3 (6.82%)0010100001
GO:0010605negative regulation of macromolecule metabolic process3 (6.82%)0010100001
GO:0009892negative regulation of metabolic process3 (6.82%)0010100001
GO:0051172negative regulation of nitrogen compound metabolic process3 (6.82%)0010100001
GO:0045934negative regulation of nucleobase-containing compound metabolic process3 (6.82%)0010100001
GO:0045892negative regulation of transcription, DNA-dependent3 (6.82%)0010100001
GO:0048513organ development3 (6.82%)1000020000
GO:0009648photoperiodism3 (6.82%)1000020000
GO:0048573photoperiodism, flowering3 (6.82%)1000020000
GO:0005976polysaccharide metabolic process3 (6.82%)1000200000
GO:0048316seed development3 (6.82%)0000120000
GO:0007165signal transduction3 (6.82%)0000120000
GO:0044702single organism reproductive process3 (6.82%)0000120000
GO:0010228vegetative to reproductive phase transition of meristem3 (6.82%)1000020000
GO:0006259DNA metabolic process2 (4.55%)0011000000
GO:0006281DNA repair2 (4.55%)0011000000
GO:0007568aging2 (4.55%)0000020000
GO:0009308amine metabolic process2 (4.55%)0010100000
GO:0051301cell division2 (4.55%)0000020000
GO:0016998cell wall macromolecule catabolic process2 (4.55%)0000200000
GO:0044036cell wall macromolecule metabolic process2 (4.55%)0000200000
GO:0071554cell wall organization or biogenesis2 (4.55%)0000200000
GO:0006974cellular response to DNA damage stimulus2 (4.55%)0011000000
GO:0071495cellular response to endogenous stimulus2 (4.55%)0000020000
GO:0071370cellular response to gibberellin stimulus2 (4.55%)0000020000
GO:0032870cellular response to hormone stimulus2 (4.55%)0000020000
GO:0071396cellular response to lipid2 (4.55%)0000020000
GO:0071407cellular response to organic cyclic compound2 (4.55%)0010100000
GO:0016311dephosphorylation2 (4.55%)2000000000
GO:0048589developmental growth2 (4.55%)0000020000
GO:0009913epidermal cell differentiation2 (4.55%)0000020000
GO:0008544epidermis development2 (4.55%)0000020000
GO:0030855epithelial cell differentiation2 (4.55%)0000020000
GO:0060429epithelium development2 (4.55%)0000020000
GO:0009740gibberellic acid mediated signaling pathway2 (4.55%)0000020000
GO:0010476gibberellin mediated signaling pathway2 (4.55%)0000020000
GO:0040007growth2 (4.55%)0000020000
GO:0009755hormone-mediated signaling pathway2 (4.55%)0000020000
GO:0048507meristem development2 (4.55%)0000020000
GO:0035266meristem growth2 (4.55%)0000020000
GO:0010073meristem maintenance2 (4.55%)0000020000
GO:0032504multicellular organism reproduction2 (4.55%)0000020000
GO:0048609multicellular organismal reproductive process2 (4.55%)0000020000
GO:0010260organ senescence2 (4.55%)0000020000
GO:1901565organonitrogen compound catabolic process2 (4.55%)1000100000
GO:0006470protein dephosphorylation2 (4.55%)2000000000
GO:0010646regulation of cell communication2 (4.55%)0000020000
GO:0045595regulation of cell differentiation2 (4.55%)0000020000
GO:0051302regulation of cell division2 (4.55%)0000020000
GO:0040034regulation of development, heterochronic2 (4.55%)0000020000
GO:0048638regulation of developmental growth2 (4.55%)0000020000
GO:0050793regulation of developmental process2 (4.55%)0000020000
GO:0045604regulation of epidermal cell differentiation2 (4.55%)0000020000
GO:0045682regulation of epidermis development2 (4.55%)0000020000
GO:0030856regulation of epithelial cell differentiation2 (4.55%)0000020000
GO:0009937regulation of gibberellic acid mediated signaling pathway2 (4.55%)0000020000
GO:0040008regulation of growth2 (4.55%)0000020000
GO:0048509regulation of meristem development2 (4.55%)0000020000
GO:0010075regulation of meristem growth2 (4.55%)0000020000
GO:2000026regulation of multicellular organismal development2 (4.55%)0000020000
GO:0051239regulation of multicellular organismal process2 (4.55%)0000020000
GO:0048580regulation of post-embryonic development2 (4.55%)0000020000
GO:0048583regulation of response to stimulus2 (4.55%)0000020000
GO:0010029regulation of seed germination2 (4.55%)0000020000
GO:1900140regulation of seedling development2 (4.55%)0000020000
GO:0009966regulation of signal transduction2 (4.55%)0000020000
GO:0023051regulation of signaling2 (4.55%)0000020000
GO:0048506regulation of timing of meristematic phase transition2 (4.55%)0000020000
GO:0048510regulation of timing of transition from vegetative to reproductive phase2 (4.55%)0000020000
GO:0009739response to gibberellin stimulus2 (4.55%)0000020000
GO:0014070response to organic cyclic compound2 (4.55%)0010100000
GO:0006979response to oxidative stress2 (4.55%)1000100000
GO:0048364root development2 (4.55%)0000020000
GO:0022622root system development2 (4.55%)0000020000
GO:0009845seed germination2 (4.55%)0000020000
GO:0010431seed maturation2 (4.55%)0000020000
GO:0090351seedling development2 (4.55%)0000020000
GO:0044765single-organism transport2 (4.55%)0000001001
GO:0043588skin development2 (4.55%)0000020000
GO:0009888tissue development2 (4.55%)0000020000
GO:0006810transport2 (4.55%)0000001001
GO:0010304PSII associated light-harvesting complex II catabolic process1 (2.27%)1000000000
GO:0031123RNA 3'-end processing1 (2.27%)0000000001
GO:0016246RNA interference1 (2.27%)0010000000
GO:0016144S-glycoside biosynthetic process1 (2.27%)1000000000
GO:0016143S-glycoside metabolic process1 (2.27%)1000000000
GO:0042873aldonate transport1 (2.27%)0000000001
GO:1901607alpha-amino acid biosynthetic process1 (2.27%)1000000000
GO:1901606alpha-amino acid catabolic process1 (2.27%)1000000000
GO:1901605alpha-amino acid metabolic process1 (2.27%)1000000000
GO:0009310amine catabolic process1 (2.27%)0000100000
GO:0009653anatomical structure morphogenesis1 (2.27%)1000000000
GO:0006820anion transport1 (2.27%)0000000001
GO:0009073aromatic amino acid family biosynthetic process1 (2.27%)1000000000
GO:0009072aromatic amino acid family metabolic process1 (2.27%)1000000000
GO:0006284base-excision repair1 (2.27%)0010000000
GO:0016051carbohydrate biosynthetic process1 (2.27%)1000000000
GO:1901137carbohydrate derivative biosynthetic process1 (2.27%)1000000000
GO:1901135carbohydrate derivative metabolic process1 (2.27%)1000000000
GO:1901264carbohydrate derivative transport1 (2.27%)0000000001
GO:0008643carbohydrate transport1 (2.27%)0000000001
GO:0046394carboxylic acid biosynthetic process1 (2.27%)1000000000
GO:0046395carboxylic acid catabolic process1 (2.27%)1000000000
GO:0019752carboxylic acid metabolic process1 (2.27%)1000000000
GO:0046942carboxylic acid transport1 (2.27%)0000000001
GO:0007267cell-cell signaling1 (2.27%)0010000000
GO:0006081cellular aldehyde metabolic process1 (2.27%)1000000000
GO:0044106cellular amine metabolic process1 (2.27%)0000100000
GO:0008652cellular amino acid biosynthetic process1 (2.27%)1000000000
GO:0009063cellular amino acid catabolic process1 (2.27%)1000000000
GO:0006520cellular amino acid metabolic process1 (2.27%)1000000000
GO:0042402cellular biogenic amine catabolic process1 (2.27%)0000100000
GO:0006576cellular biogenic amine metabolic process1 (2.27%)0000100000
GO:0034637cellular carbohydrate biosynthetic process1 (2.27%)1000000000
GO:0022607cellular component assembly1 (2.27%)1000000000
GO:0044085cellular component biogenesis1 (2.27%)1000000000
GO:0044255cellular lipid metabolic process1 (2.27%)1000000000
GO:0051641cellular localization1 (2.27%)1000000000
GO:0034622cellular macromolecular complex assembly1 (2.27%)1000000000
GO:0044265cellular macromolecule catabolic process1 (2.27%)1000000000
GO:0033692cellular polysaccharide biosynthetic process1 (2.27%)1000000000
GO:0044257cellular protein catabolic process1 (2.27%)1000000000
GO:0043623cellular protein complex assembly1 (2.27%)1000000000
GO:0036294cellular response to decreased oxygen levels1 (2.27%)0000100000
GO:0071359cellular response to dsRNA1 (2.27%)0010000000
GO:0070301cellular response to hydrogen peroxide1 (2.27%)1000000000
GO:0071456cellular response to hypoxia1 (2.27%)0000100000
GO:1901699cellular response to nitrogen compound1 (2.27%)0010000000
GO:0034599cellular response to oxidative stress1 (2.27%)1000000000
GO:0071453cellular response to oxygen levels1 (2.27%)0000100000
GO:0034614cellular response to reactive oxygen species1 (2.27%)1000000000
GO:0071446cellular response to salicylic acid stimulus1 (2.27%)0000100000
GO:0015995chlorophyll biosynthetic process1 (2.27%)1000000000
GO:0015994chlorophyll metabolic process1 (2.27%)1000000000
GO:0009658chloroplast organization1 (2.27%)1000000000
GO:0009902chloroplast relocation1 (2.27%)1000000000
GO:0016568chromatin modification1 (2.27%)0010000000
GO:0006325chromatin organization1 (2.27%)0010000000
GO:0006342chromatin silencing1 (2.27%)0010000000
GO:0051276chromosome organization1 (2.27%)0010000000
GO:0009108coenzyme biosynthetic process1 (2.27%)1000000000
GO:0051188cofactor biosynthetic process1 (2.27%)1000000000
GO:0016569covalent chromatin modification1 (2.27%)0010000000
GO:0019344cysteine biosynthetic process1 (2.27%)1000000000
GO:0006534cysteine metabolic process1 (2.27%)1000000000
GO:0007010cytoskeleton organization1 (2.27%)0000000100
GO:0006952defense response1 (2.27%)0000100000
GO:0098542defense response to other organism1 (2.27%)0000100000
GO:0009814defense response, incompatible interaction1 (2.27%)0000100000
GO:0031050dsRNA fragmentation1 (2.27%)0010000000
GO:0009790embryo development1 (2.27%)0000100000
GO:0009793embryo development ending in seed dormancy1 (2.27%)0000100000
GO:0009559embryo sac central cell differentiation1 (2.27%)0000100000
GO:0009553embryo sac development1 (2.27%)0000100000
GO:0051649establishment of localization in cell1 (2.27%)1000000000
GO:0051656establishment of organelle localization1 (2.27%)1000000000
GO:0051667establishment of plastid localization1 (2.27%)1000000000
GO:0006633fatty acid biosynthetic process1 (2.27%)1000000000
GO:0006631fatty acid metabolic process1 (2.27%)1000000000
GO:0048229gametophyte development1 (2.27%)0000100000
GO:0016458gene silencing1 (2.27%)0010000000
GO:0031047gene silencing by RNA1 (2.27%)0010000000
GO:0009250glucan biosynthetic process1 (2.27%)1000000000
GO:0019761glucosinolate biosynthetic process1 (2.27%)1000000000
GO:0019760glucosinolate metabolic process1 (2.27%)1000000000
GO:0019682glyceraldehyde-3-phosphate metabolic process1 (2.27%)1000000000
GO:0006546glycine catabolic process1 (2.27%)1000000000
GO:0006544glycine metabolic process1 (2.27%)1000000000
GO:0019758glycosinolate biosynthetic process1 (2.27%)1000000000
GO:0019757glycosinolate metabolic process1 (2.27%)1000000000
GO:1901659glycosyl compound biosynthetic process1 (2.27%)1000000000
GO:1901657glycosyl compound metabolic process1 (2.27%)1000000000
GO:0042744hydrogen peroxide catabolic process1 (2.27%)1000000000
GO:0042743hydrogen peroxide metabolic process1 (2.27%)1000000000
GO:0006955immune response1 (2.27%)0000100000
GO:0002376immune system process1 (2.27%)0000100000
GO:0045087innate immune response1 (2.27%)0000100000
GO:0006811ion transport1 (2.27%)0000000001
GO:0009240isopentenyl diphosphate biosynthetic process1 (2.27%)1000000000
GO:0019288isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1 (2.27%)1000000000
GO:0046490isopentenyl diphosphate metabolic process1 (2.27%)1000000000
GO:0008299isoprenoid biosynthetic process1 (2.27%)1000000000
GO:0006720isoprenoid metabolic process1 (2.27%)1000000000
GO:0009695jasmonic acid biosynthetic process1 (2.27%)1000000000
GO:0009694jasmonic acid metabolic process1 (2.27%)1000000000
GO:0000741karyogamy1 (2.27%)0000100000
GO:0048366leaf development1 (2.27%)1000000000
GO:0009965leaf morphogenesis1 (2.27%)1000000000
GO:0008610lipid biosynthetic process1 (2.27%)1000000000
GO:0006629lipid metabolic process1 (2.27%)1000000000
GO:0009106lipoate metabolic process1 (2.27%)1000000000
GO:0010495long-distance posttranscriptional gene silencing1 (2.27%)0010000000
GO:0016071mRNA metabolic process1 (2.27%)0000000001
GO:0006397mRNA processing1 (2.27%)0000000001
GO:0065003macromolecular complex assembly1 (2.27%)1000000000
GO:0043933macromolecular complex subunit organization1 (2.27%)1000000000
GO:0009057macromolecule catabolic process1 (2.27%)1000000000
GO:0009561megagametogenesis1 (2.27%)0000100000
GO:0061024membrane organization1 (2.27%)1000000000
GO:0006346methylation-dependent chromatin silencing1 (2.27%)0010000000
GO:0072330monocarboxylic acid biosynthetic process1 (2.27%)1000000000
GO:0032787monocarboxylic acid metabolic process1 (2.27%)1000000000
GO:0015718monocarboxylic acid transport1 (2.27%)0000000001
GO:0051704multi-organism process1 (2.27%)0000100000
GO:0034660ncRNA metabolic process1 (2.27%)1000000000
GO:0034470ncRNA processing1 (2.27%)1000000000
GO:0045814negative regulation of gene expression, epigenetic1 (2.27%)0010000000
GO:0006997nucleus organization1 (2.27%)0000100000
GO:0009887organ morphogenesis1 (2.27%)1000000000
GO:0048284organelle fusion1 (2.27%)0000100000
GO:0051640organelle localization1 (2.27%)1000000000
GO:0016053organic acid biosynthetic process1 (2.27%)1000000000
GO:0016054organic acid catabolic process1 (2.27%)1000000000
GO:0006082organic acid metabolic process1 (2.27%)1000000000
GO:0015849organic acid transport1 (2.27%)0000000001
GO:0015711organic anion transport1 (2.27%)0000000001
GO:0071702organic substance transport1 (2.27%)0000000001
GO:1901566organonitrogen compound biosynthetic process1 (2.27%)1000000000
GO:0090407organophosphate biosynthetic process1 (2.27%)1000000000
GO:0015748organophosphate ester transport1 (2.27%)0000000001
GO:0043436oxoacid metabolic process1 (2.27%)1000000000
GO:0015713phosphoglycerate transport1 (2.27%)0000000001
GO:0008654phospholipid biosynthetic process1 (2.27%)1000000000
GO:0006644phospholipid metabolic process1 (2.27%)1000000000
GO:0016310phosphorylation1 (2.27%)0010000000
GO:0015979photosynthesis1 (2.27%)1000000000
GO:0019684photosynthesis, light reaction1 (2.27%)1000000000
GO:0009643photosynthetic acclimation1 (2.27%)0000000001
GO:0010207photosystem II assembly1 (2.27%)1000000000
GO:0048827phyllome development1 (2.27%)1000000000
GO:0046148pigment biosynthetic process1 (2.27%)1000000000
GO:0042440pigment metabolic process1 (2.27%)1000000000
GO:0051644plastid localization1 (2.27%)1000000000
GO:0009668plastid membrane organization1 (2.27%)1000000000
GO:0009657plastid organization1 (2.27%)1000000000
GO:0010197polar nucleus fusion1 (2.27%)0000100000
GO:0006598polyamine catabolic process1 (2.27%)0000100000
GO:0006595polyamine metabolic process1 (2.27%)0000100000
GO:0000271polysaccharide biosynthetic process1 (2.27%)1000000000
GO:0006779porphyrin-containing compound biosynthetic process1 (2.27%)1000000000
GO:0006778porphyrin-containing compound metabolic process1 (2.27%)1000000000
GO:0016441posttranscriptional gene silencing1 (2.27%)0010000000
GO:0035194posttranscriptional gene silencing by RNA1 (2.27%)0010000000
GO:0010608posttranscriptional regulation of gene expression1 (2.27%)0010000000
GO:0030422production of siRNA involved in RNA interference1 (2.27%)0010000000
GO:0070918production of small RNA involved in gene silencing by RNA1 (2.27%)0010000000
GO:0030163protein catabolic process1 (2.27%)1000000000
GO:0006461protein complex assembly1 (2.27%)1000000000
GO:0070271protein complex biogenesis1 (2.27%)1000000000
GO:0071822protein complex subunit organization1 (2.27%)1000000000
GO:0032446protein modification by small protein conjugation1 (2.27%)0000001000
GO:0070647protein modification by small protein conjugation or removal1 (2.27%)0000001000
GO:0006468protein phosphorylation1 (2.27%)0010000000
GO:0016567protein ubiquitination1 (2.27%)0000001000
GO:0006090pyruvate metabolic process1 (2.27%)1000000000
GO:0016072rRNA metabolic process1 (2.27%)1000000000
GO:0006364rRNA processing1 (2.27%)1000000000
GO:0072593reactive oxygen species metabolic process1 (2.27%)1000000000
GO:0032268regulation of cellular protein metabolic process1 (2.27%)1000000000
GO:0035303regulation of dephosphorylation1 (2.27%)1000000000
GO:0040029regulation of gene expression, epigenetic1 (2.27%)0010000000
GO:0019220regulation of phosphate metabolic process1 (2.27%)1000000000
GO:0051174regulation of phosphorus metabolic process1 (2.27%)1000000000
GO:0035304regulation of protein dephosphorylation1 (2.27%)1000000000
GO:0051246regulation of protein metabolic process1 (2.27%)1000000000
GO:0031399regulation of protein modification process1 (2.27%)1000000000
GO:0009607response to biotic stimulus1 (2.27%)0000100000
GO:0009637response to blue light1 (2.27%)1000000000
GO:0036293response to decreased oxygen levels1 (2.27%)0000100000
GO:0043331response to dsRNA1 (2.27%)0010000000
GO:0010218response to far red light1 (2.27%)1000000000
GO:0042542response to hydrogen peroxide1 (2.27%)1000000000
GO:0001666response to hypoxia1 (2.27%)0000100000
GO:0009753response to jasmonic acid1 (2.27%)0000100000
GO:0009642response to light intensity1 (2.27%)0000000001
GO:1901698response to nitrogen compound1 (2.27%)0010000000
GO:0051707response to other organism1 (2.27%)0000100000
GO:0070482response to oxygen levels1 (2.27%)0000100000
GO:0000302response to reactive oxygen species1 (2.27%)1000000000
GO:0010114response to red light1 (2.27%)1000000000
GO:0009639response to red or far red light1 (2.27%)1000000000
GO:0009751response to salicylic acid1 (2.27%)0000100000
GO:0009611response to wounding1 (2.27%)0000100000
GO:0009410response to xenobiotic stimulus1 (2.27%)0000100000
GO:0022613ribonucleoprotein complex biogenesis1 (2.27%)1000000000
GO:0042254ribosome biogenesis1 (2.27%)1000000000
GO:0009863salicylic acid mediated signaling pathway1 (2.27%)0000100000
GO:0019748secondary metabolic process1 (2.27%)1000000000
GO:0044550secondary metabolite biosynthetic process1 (2.27%)1000000000
GO:0009070serine family amino acid biosynthetic process1 (2.27%)1000000000
GO:0009071serine family amino acid catabolic process1 (2.27%)1000000000
GO:0009069serine family amino acid metabolic process1 (2.27%)1000000000
GO:0048367shoot system development1 (2.27%)1000000000
GO:0010016shoot system morphogenesis1 (2.27%)1000000000
GO:0044711single-organism biosynthetic process1 (2.27%)1000000000
GO:0044802single-organism membrane organization1 (2.27%)1000000000
GO:0044283small molecule biosynthetic process1 (2.27%)1000000000
GO:0044282small molecule catabolic process1 (2.27%)1000000000
GO:0019252starch biosynthetic process1 (2.27%)1000000000
GO:0005982starch metabolic process1 (2.27%)1000000000
GO:0000097sulfur amino acid biosynthetic process1 (2.27%)1000000000
GO:0000096sulfur amino acid metabolic process1 (2.27%)1000000000
GO:0044272sulfur compound biosynthetic process1 (2.27%)1000000000
GO:0006790sulfur compound metabolic process1 (2.27%)1000000000
GO:0009627systemic acquired resistance1 (2.27%)0000100000
GO:0009862systemic acquired resistance, salicylic acid mediated signaling pathway1 (2.27%)0000100000
GO:0033014tetrapyrrole biosynthetic process1 (2.27%)1000000000
GO:0033013tetrapyrrole metabolic process1 (2.27%)1000000000
GO:0010027thylakoid membrane organization1 (2.27%)1000000000
GO:0055085transmembrane transport1 (2.27%)0000000001
GO:0035436triose phosphate transmembrane transport1 (2.27%)0000000001
GO:0015717triose phosphate transport1 (2.27%)0000000001
GO:0006636unsaturated fatty acid biosynthetic process1 (2.27%)1000000000
GO:0033559unsaturated fatty acid metabolic process1 (2.27%)1000000000
GO:0006766vitamin metabolic process1 (2.27%)1000000000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding25 (56.82%)2221842103
GO:0005515protein binding18 (40.91%)1120532103
GO:0003824catalytic activity15 (34.09%)2031801000
GO:1901363heterocyclic compound binding14 (31.82%)1121530001
GO:0097159organic cyclic compound binding14 (31.82%)1121530001
GO:0043167ion binding13 (29.55%)1021530001
GO:0003676nucleic acid binding11 (25.00%)0111430001
GO:0043169cation binding9 (20.45%)1010430000
GO:0046872metal ion binding9 (20.45%)1010430000
GO:0003677DNA binding6 (13.64%)0111210000
GO:0016787hydrolase activity5 (11.36%)1011200000
GO:0016740transferase activity5 (11.36%)0020300000
GO:0016832aldehyde-lyase activity4 (9.09%)1000300000
GO:0043168anion binding4 (9.09%)0011100001
GO:0016830carbon-carbon lyase activity4 (9.09%)1000300000
GO:0004332fructose-bisphosphate aldolase activity4 (9.09%)1000300000
GO:0016829lyase activity4 (9.09%)1000300000
GO:1901265nucleoside phosphate binding4 (9.09%)1011100000
GO:0000166nucleotide binding4 (9.09%)1011100000
GO:0036094small molecule binding4 (9.09%)1011100000
GO:0046914transition metal ion binding4 (9.09%)0010210000
GO:0016798hydrolase activity, acting on glycosyl bonds3 (6.82%)0010200000
GO:0042802identical protein binding3 (6.82%)0000120000
GO:0046983protein dimerization activity3 (6.82%)0000120000
GO:0016757transferase activity, transferring glycosyl groups3 (6.82%)0000300000
GO:0016758transferase activity, transferring hexosyl groups3 (6.82%)0000300000
GO:0008270zinc ion binding3 (6.82%)0000210000
GO:0005524ATP binding2 (4.55%)0011000000
GO:0030554adenyl nucleotide binding2 (4.55%)0011000000
GO:0032559adenyl ribonucleotide binding2 (4.55%)0011000000
GO:0097367carbohydrate derivative binding2 (4.55%)0011000000
GO:0048037cofactor binding2 (4.55%)0010100000
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds2 (4.55%)0000200000
GO:0001882nucleoside binding2 (4.55%)0011000000
GO:0016491oxidoreductase activity2 (4.55%)0000200000
GO:0042803protein homodimerization activity2 (4.55%)0000020000
GO:0001883purine nucleoside binding2 (4.55%)0011000000
GO:0017076purine nucleotide binding2 (4.55%)0011000000
GO:0032550purine ribonucleoside binding2 (4.55%)0011000000
GO:0035639purine ribonucleoside triphosphate binding2 (4.55%)0011000000
GO:0032555purine ribonucleotide binding2 (4.55%)0011000000
GO:0032549ribonucleoside binding2 (4.55%)0011000000
GO:0032553ribonucleotide binding2 (4.55%)0011000000
GO:0016772transferase activity, transferring phosphorus-containing groups2 (4.55%)0020000000
GO:0016762xyloglucan:xyloglucosyl transferase activity2 (4.55%)0000200000
GO:0016887ATPase activity1 (2.27%)0001000000
GO:0042623ATPase activity, coupled1 (2.27%)0001000000
GO:0019104DNA N-glycosylase activity1 (2.27%)0010000000
GO:0008725DNA-3-methyladenine glycosylase activity1 (2.27%)0010000000
GO:0043733DNA-3-methylbase glycosylase activity1 (2.27%)0010000000
GO:0008094DNA-dependent ATPase activity1 (2.27%)0001000000
GO:0003899DNA-directed RNA polymerase activity1 (2.27%)0010000000
GO:0003723RNA binding1 (2.27%)0000000001
GO:0034062RNA polymerase activity1 (2.27%)0010000000
GO:0008762UDP-N-acetylmuramate dehydrogenase activity1 (2.27%)0000100000
GO:0035251UDP-glucosyltransferase activity1 (2.27%)0000100000
GO:0008194UDP-glycosyltransferase activity1 (2.27%)0000100000
GO:0016881acid-amino acid ligase activity1 (2.27%)0000001000
GO:0042879aldonate transmembrane transporter activity1 (2.27%)0000000001
GO:0003905alkylbase DNA N-glycosylase activity1 (2.27%)0010000000
GO:0008509anion transmembrane transporter activity1 (2.27%)0000000001
GO:1901505carbohydrate derivative transporter activity1 (2.27%)0000000001
GO:0015144carbohydrate transmembrane transporter activity1 (2.27%)0000000001
GO:1901476carbohydrate transporter activity1 (2.27%)0000000001
GO:0046943carboxylic acid transmembrane transporter activity1 (2.27%)0000000001
GO:0003682chromatin binding1 (2.27%)0100000000
GO:0050662coenzyme binding1 (2.27%)0000100000
GO:0005507copper ion binding1 (2.27%)0010000000
GO:0008092cytoskeletal protein binding1 (2.27%)0000000100
GO:0050660flavin adenine dinucleotide binding1 (2.27%)0000100000
GO:0046527glucosyltransferase activity1 (2.27%)0000100000
GO:0016817hydrolase activity, acting on acid anhydrides1 (2.27%)0001000000
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides1 (2.27%)0001000000
GO:0016788hydrolase activity, acting on ester bonds1 (2.27%)1000000000
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds1 (2.27%)0010000000
GO:0015075ion transmembrane transporter activity1 (2.27%)0000000001
GO:0050004isoflavone 7-O-glucosyltransferase activity1 (2.27%)0000100000
GO:0016301kinase activity1 (2.27%)0010000000
GO:0016874ligase activity1 (2.27%)0000001000
GO:0016879ligase activity, forming carbon-nitrogen bonds1 (2.27%)0000001000
GO:0008289lipid binding1 (2.27%)0000000001
GO:0003729mRNA binding1 (2.27%)0000000001
GO:0008017microtubule binding1 (2.27%)0000000100
GO:0008028monocarboxylic acid transmembrane transporter activity1 (2.27%)0000000001
GO:0001071nucleic acid binding transcription factor activity1 (2.27%)0000100000
GO:0017111nucleoside-triphosphatase activity1 (2.27%)0001000000
GO:0016779nucleotidyltransferase activity1 (2.27%)0010000000
GO:0005342organic acid transmembrane transporter activity1 (2.27%)0000000001
GO:0008514organic anion transmembrane transporter activity1 (2.27%)0000000001
GO:0015605organophosphate ester transmembrane transporter activity1 (2.27%)0000000001
GO:0016614oxidoreductase activity, acting on CH-OH group of donors1 (2.27%)0000100000
GO:0016645oxidoreductase activity, acting on the CH-NH group of donors1 (2.27%)0000100000
GO:0016647oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor1 (2.27%)0000100000
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor1 (2.27%)0000100000
GO:0016791phosphatase activity1 (2.27%)1000000000
GO:1901677phosphate transmembrane transporter activity1 (2.27%)0000000001
GO:0015120phosphoglycerate transmembrane transporter activity1 (2.27%)0000000001
GO:0005543phospholipid binding1 (2.27%)0000000001
GO:0004721phosphoprotein phosphatase activity1 (2.27%)1000000000
GO:0042578phosphoric ester hydrolase activity1 (2.27%)1000000000
GO:0016773phosphotransferase activity, alcohol group as acceptor1 (2.27%)0010000000
GO:0046592polyamine oxidase activity1 (2.27%)0000100000
GO:0032403protein complex binding1 (2.27%)0000000100
GO:0004672protein kinase activity1 (2.27%)0010000000
GO:0004674protein serine/threonine kinase activity1 (2.27%)0010000000
GO:0004722protein serine/threonine phosphatase activity1 (2.27%)1000000000
GO:0016462pyrophosphatase activity1 (2.27%)0001000000
GO:0048038quinone binding1 (2.27%)0010000000
GO:0043565sequence-specific DNA binding1 (2.27%)0000100000
GO:0003700sequence-specific DNA binding transcription factor activity1 (2.27%)0000100000
GO:0019787small conjugating protein ligase activity1 (2.27%)0000001000
GO:0022891substrate-specific transmembrane transporter activity1 (2.27%)0000000001
GO:0022892substrate-specific transporter activity1 (2.27%)0000000001
GO:0022857transmembrane transporter activity1 (2.27%)0000000001
GO:0005215transporter activity1 (2.27%)0000000001
GO:0071917triose-phosphate transmembrane transporter activity1 (2.27%)0000000001
GO:0015631tubulin binding1 (2.27%)0000000100
GO:0004842ubiquitin-protein ligase activity1 (2.27%)0000001000