PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_593
Name: E2Fb;E2Fc;E2Fd;E2Ff;E2Fe;E2Fa
Description: The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants. Arabidopsis E2F1 binds a sequence present in the promoter of S-phase-regulated gene AtCDC6 and is a member of a multigene family with differential activities

#Associated genes: 67
#Associated InterPro terms: 57

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InterPro	Description	#Associated genes	ath	bra	cme	egr	gma	ptr	ppe	sly	stu	vvi
IPR013763	Cyclin-like	8 (11.94%)	1	3	1	1	0	1	1	0	0	0
IPR028309	Retinoblastoma protein family	8 (11.94%)	1	3	1	1	0	1	1	0	0	0
IPR002720	Retinoblastoma-associated protein, A-box	8 (11.94%)	1	3	1	1	0	1	1	0	0	0
IPR002719	Retinoblastoma-associated protein, B-box	8 (11.94%)	1	3	1	1	0	1	1	0	0	0
IPR024599	Retinoblastoma-associated protein, N-terminal	8 (11.94%)	1	3	1	1	0	1	1	0	0	0
IPR013083	Zinc finger, RING/FYVE/PHD-type	7 (10.45%)	0	0	1	0	2	1	0	1	1	1
IPR001841	Zinc finger, RING-type	6 (8.96%)	0	0	1	0	2	1	1	0	0	1
IPR013697	DNA polymerase epsilon, catalytic subunit A, C-terminal	5 (7.46%)	1	1	0	1	1	0	1	0	0	0
IPR006172	DNA-directed DNA polymerase, family B	5 (7.46%)	1	1	0	1	1	0	1	0	0	0
IPR006133	DNA-directed DNA polymerase, family B, exonuclease domain	5 (7.46%)	1	1	0	1	1	0	1	0	0	0
IPR006134	DNA-directed DNA polymerase, family B, multifunctional domain	5 (7.46%)	1	1	0	1	1	0	1	0	0	0
IPR006943	Domain of unknown function DUF641, plant	5 (7.46%)	0	0	0	0	2	1	2	0	0	0
IPR012337	Ribonuclease H-like domain	5 (7.46%)	1	1	0	1	1	0	1	0	0	0
IPR011991	Winged helix-turn-helix DNA-binding domain	5 (7.46%)	0	0	0	0	2	0	0	1	0	2
IPR011893	Selenoprotein, Rdx type	4 (5.97%)	0	0	1	0	0	2	0	0	1	0
IPR010776	Tat binding protein 1-interacting	4 (5.97%)	0	0	0	0	1	0	0	1	1	1
IPR024788	Malectin-like carbohydrate-binding domain	3 (4.48%)	0	0	0	1	0	0	1	0	0	1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	3 (4.48%)	0	1	0	0	1	0	0	0	0	1
IPR006766	Phosphate-induced protein 1	3 (4.48%)	0	0	0	0	2	1	0	0	0	0
IPR013924	Ribonuclease H2, subunit C	3 (4.48%)	0	0	0	1	0	1	0	1	0	0
IPR012336	Thioredoxin-like fold	3 (4.48%)	0	0	0	0	0	2	0	0	1	0
IPR015163	CDC6, C-terminal domain	2 (2.99%)	0	0	0	0	1	0	0	0	0	1
IPR000595	Cyclic nucleotide-binding domain	2 (2.99%)	1	0	0	1	0	0	0	0	0	0
IPR018490	Cyclic nucleotide-binding-like	2 (2.99%)	1	0	0	1	0	0	0	0	0	0
IPR026171	Fanconi anemia group I protein	2 (2.99%)	0	1	0	0	0	1	0	0	0	0
IPR002495	Glycosyl transferase, family 8	2 (2.99%)	0	0	0	1	0	1	0	0	0	0
IPR001611	Leucine-rich repeat	2 (2.99%)	0	0	0	0	0	0	1	0	0	1
IPR014710	RmlC-like jelly roll fold	2 (2.99%)	1	0	0	1	0	0	0	0	0	0
IPR001214	SET domain	2 (2.99%)	0	0	0	0	0	0	0	1	1	0
IPR006969	Stigma-specific protein Stig1	2 (2.99%)	0	0	0	0	0	2	0	0	0	0
IPR007725	Timeless C-terminal	2 (2.99%)	0	0	0	1	0	1	0	0	0	0
IPR006906	Timeless protein	2 (2.99%)	0	0	0	1	0	1	0	0	0	0
IPR011011	Zinc finger, FYVE/PHD-type	2 (2.99%)	0	0	0	0	0	0	0	1	1	0
IPR019787	Zinc finger, PHD-finger	2 (2.99%)	0	0	0	0	0	0	0	1	1	0
IPR001965	Zinc finger, PHD-type	2 (2.99%)	0	0	0	0	0	0	0	1	1	0
IPR019786	Zinc finger, PHD-type, conserved site	2 (2.99%)	0	0	0	0	0	0	0	1	1	0
IPR014733	Barwin-like endoglucanase	1 (1.49%)	0	0	0	0	1	0	0	0	0	0
IPR014939	CDT1 Geminin-binding domain-like	1 (1.49%)	0	0	0	0	1	0	0	0	0	0
IPR000095	CRIB domain	1 (1.49%)	0	0	0	0	0	1	0	0	0	0
IPR001715	Calponin homology domain	1 (1.49%)	0	1	0	0	0	0	0	0	0	0
IPR008972	Cupredoxin	1 (1.49%)	0	0	0	0	0	0	1	0	0	0
IPR003657	DNA-binding WRKY	1 (1.49%)	0	0	0	0	0	0	0	0	0	1
IPR001623	DnaJ domain	1 (1.49%)	0	0	0	0	0	1	0	0	0	0
IPR002963	Expansin	1 (1.49%)	0	0	0	0	1	0	0	0	0	0
IPR007117	Expansin, cellulose-binding-like domain	1 (1.49%)	0	0	0	0	1	0	0	0	0	0
IPR007118	Expansin/Lol pI	1 (1.49%)	0	0	0	0	1	0	0	0	0	0
IPR007112	Expansin/pollen allergen, DPBB domain	1 (1.49%)	0	0	0	0	1	0	0	0	0	0
IPR009072	Histone-fold	1 (1.49%)	0	0	0	0	0	0	0	0	0	1
IPR000048	IQ motif, EF-hand binding site	1 (1.49%)	0	0	0	1	0	0	0	0	0	0
IPR005821	Ion transport domain	1 (1.49%)	0	0	0	1	0	0	0	0	0	0
IPR001752	Kinesin, motor domain	1 (1.49%)	0	1	0	0	0	0	0	0	0	0
IPR027640	Kinesin-like protein	1 (1.49%)	0	1	0	0	0	0	0	0	0	0
IPR013210	Leucine-rich repeat-containing N-terminal, type 2	1 (1.49%)	0	0	0	0	0	0	0	0	0	1
IPR001117	Multicopper oxidase, type 1	1 (1.49%)	0	0	0	0	0	0	1	0	0	0
IPR011706	Multicopper oxidase, type 2	1 (1.49%)	0	0	0	0	0	0	1	0	0	0
IPR011707	Multicopper oxidase, type 3	1 (1.49%)	0	0	0	0	0	0	1	0	0	0
IPR009009	RlpA-like double-psi beta-barrel domain	1 (1.49%)	0	0	0	0	1	0	0	0	0	0