Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchInterPro domains associated with a binding site
- Binding site
- Motif_592
- Name
- WRKY43;WRKY38;WRKY26
- Description
- Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function
- #Associated genes
- 24
- #Associated InterPro terms
- 25
Click table-header(s) to enable sorting
| InterPro | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IPR004883 | Lateral organ boundaries, LOB | 5 (20.83%) | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 2 |
| IPR016140 | Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain | 3 (12.50%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 0 |
| IPR009057 | Homeodomain-like | 3 (12.50%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 |
| IPR000528 | Plant lipid transfer protein/Par allergen | 3 (12.50%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 0 |
| IPR001005 | SANT/Myb domain | 3 (12.50%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | 3 (12.50%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 1 |
| IPR017930 | Myb domain | 2 (8.33%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
| IPR001841 | Zinc finger, RING-type | 2 (8.33%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
| IPR001471 | AP2/ERF domain | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR001025 | Bromo adjacent homology (BAH) domain | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR016177 | DNA-binding domain | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR025064 | Domain of unknown function DUF4005 | 1 (4.17%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR006869 | Domain of unknown function DUF547 | 1 (4.17%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR006813 | Glycosyl transferase, family 17 | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| IPR000048 | IQ motif, EF-hand binding site | 1 (4.17%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR002921 | Lipase, class 3 | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR009806 | Photosystem II PsbW, class 2 | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR017884 | SANT domain | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| IPR025757 | Ternary complex factor MIP1, leucine-zipper | 1 (4.17%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR002487 | Transcription factor, K-box | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR002100 | Transcription factor, MADS-box | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR011011 | Zinc finger, FYVE/PHD-type | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR019787 | Zinc finger, PHD-finger | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR001965 | Zinc finger, PHD-type | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR019786 | Zinc finger, PHD-type, conserved site | 1 (4.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |