PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_590
Name: MYB3 binding site motif
Description: Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses

#Associated genes: 559
#Associated MapMan terms: 172

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	89 (15.92%)	6	8	4	18	30	12	5	6
27.3	RNA.regulation of transcription	80 (14.31%)	6	7	4	17	27	10	4	5
26	misc	53 (9.48%)	3	12	2	12	9	4	8	3
10	cell wall	35 (6.26%)	2	2	2	17	2	3	4	3
29	protein	27 (4.83%)	5	5	2	6	4	2	1	2
33	development	23 (4.11%)	2	4	2	6	4	1	2	2
30	signalling	22 (3.94%)	1	2	0	5	3	5	3	3
33.99	development.unspecified	22 (3.94%)	2	4	2	5	4	1	2	2
34	transport	21 (3.76%)	1	4	1	6	1	3	1	4
17	hormone metabolism	20 (3.58%)	3	1	5	4	3	3	1	0
26.12	misc.peroxidases	20 (3.58%)	0	4	0	6	4	1	4	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	19 (3.40%)	1	0	2	4	5	4	2	1
31	cell	17 (3.04%)	1	2	0	7	4	1	1	1
29.4	protein.postranslational modification	16 (2.86%)	3	4	2	3	1	1	1	1
26.21	misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	13 (2.33%)	2	4	1	1	1	1	2	1
10.6	cell wall.degradation	12 (2.15%)	0	1	0	7	2	0	1	1
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	12 (2.15%)	0	1	0	7	2	0	1	1
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	12 (2.15%)	0	1	0	2	7	1	0	1
27.3.5	RNA.regulation of transcription.ARR	11 (1.97%)	0	2	1	2	2	1	2	1
29.4.1	protein.postranslational modification.kinase	11 (1.97%)	2	3	2	2	1	1	0	0
31.1	cell.organisation	11 (1.97%)	1	2	0	3	2	1	1	1
11	lipid metabolism	10 (1.79%)	1	2	0	2	1	2	1	1
17.2	hormone metabolism.auxin	10 (1.79%)	1	1	3	2	2	1	0	0
30.5	signalling.G-proteins	10 (1.79%)	0	1	0	3	2	2	1	1
20	stress	9 (1.61%)	2	0	0	2	3	1	0	1
27.3.99	RNA.regulation of transcription.unclassified	9 (1.61%)	1	1	2	2	2	1	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	9 (1.61%)	0	3	2	2	1	1	0	0
10.1	cell wall.precursor synthesis	8 (1.43%)	1	0	1	3	0	1	2	0
10.7	cell wall.modification	7 (1.25%)	0	1	1	4	0	0	0	1
16	secondary metabolism	7 (1.25%)	0	1	2	2	2	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	7 (1.25%)	0	0	0	1	5	1	0	0
30.2	signalling.receptor kinases	7 (1.25%)	1	1	0	0	0	2	2	1
8	TCA / org transformation	6 (1.07%)	1	1	1	1	1	0	0	1
10.1.1	cell wall.precursor synthesis.NDP sugar pyrophosphorylase	6 (1.07%)	1	0	1	2	0	1	1	0
10.1.1.20	cell wall.precursor synthesis.NDP sugar pyrophosphorylase.multiple NDP-Sugars	6 (1.07%)	1	0	1	2	0	1	1	0
8.2	TCA / org transformation.other organic acid transformations	6 (1.07%)	1	1	1	1	1	0	0	1
10.2	cell wall.cellulose synthesis	6 (1.07%)	0	0	0	3	0	1	1	1
10.2.1	cell wall.cellulose synthesis.cellulose synthase	6 (1.07%)	0	0	0	3	0	1	1	1
11.1	lipid metabolism.FA synthesis and FA elongation	6 (1.07%)	1	1	0	2	1	1	0	0
11.1.1	lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation	6 (1.07%)	1	1	0	2	1	1	0	0
11.1.1.2	lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex	6 (1.07%)	1	1	0	2	1	1	0	0
11.1.1.2.3	lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein	6 (1.07%)	1	1	0	2	1	1	0	0
17.2.2	hormone metabolism.auxin.signal transduction	6 (1.07%)	0	1	0	2	2	1	0	0
17.5	hormone metabolism.ethylene	6 (1.07%)	2	0	1	1	0	1	1	0
20.2	stress.abiotic	6 (1.07%)	1	0	0	2	2	0	0	1
27.3.12	RNA.regulation of transcription.C3H zinc finger family	6 (1.07%)	1	1	1	0	1	1	0	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	6 (1.07%)	0	1	0	1	3	0	0	1
27.4	RNA.RNA binding	6 (1.07%)	0	1	0	0	3	1	1	0
29.5	protein.degradation	6 (1.07%)	1	1	0	1	1	1	0	1
34.99	transport.misc	6 (1.07%)	0	2	1	1	0	1	0	1
8.2.11	TCA / org transformation.other organic acid transformatons.atp-citrate lyase	6 (1.07%)	1	1	1	1	1	0	0	1
21	redox	5 (0.89%)	0	1	0	0	0	3	0	1
21.2	redox.ascorbate and glutathione	5 (0.89%)	0	1	0	0	0	3	0	1
26.7	misc.oxidases - copper, flavone etc	5 (0.89%)	0	0	0	3	0	1	0	1
27.3.42	RNA.regulation of transcription.Bromodomain proteins	5 (0.89%)	0	0	0	5	0	0	0	0
28	DNA	5 (0.89%)	1	1	0	1	1	0	0	1
28.1	DNA.synthesis/chromatin structure	5 (0.89%)	1	1	0	1	1	0	0	1
16.10	secondary metabolism.simple phenols	4 (0.72%)	0	0	2	0	2	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	4 (0.72%)	1	0	3	0	0	0	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	4 (0.72%)	1	0	1	1	0	0	1	0
21.2.1	redox.ascorbate and glutathione.ascorbate	4 (0.72%)	0	0	0	0	0	3	0	1
21.2.1.5	redox.ascorbate and glutathione.ascorbate.L-Galactono-1,4-lactone dehydrogenase	4 (0.72%)	0	0	0	0	0	3	0	1
26.16	misc.myrosinases-lectin-jacalin	4 (0.72%)	0	2	1	0	1	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	4 (0.72%)	1	0	0	1	0	1	1	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	4 (0.72%)	0	0	0	0	0	2	1	1
30.3	signalling.calcium	4 (0.72%)	0	0	0	2	1	1	0	0
20.1	stress.biotic	3 (0.54%)	1	0	0	0	1	1	0	0
20.2.3	stress.abiotic.drought/salt	3 (0.54%)	0	0	0	1	2	0	0	0
26.10	misc.cytochrome P450	3 (0.54%)	1	1	0	0	0	1	0	0
26.13	misc.acid and other phosphatases	3 (0.54%)	0	1	0	0	2	0	0	0
26.28	misc.GDSL-motif lipase	3 (0.54%)	0	0	0	1	0	0	2	0
27.1	RNA.processing	3 (0.54%)	0	0	0	1	0	1	0	1
27.1.1	RNA.processing.splicing	3 (0.54%)	0	0	0	1	0	1	0	1
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	3 (0.54%)	1	0	0	1	1	0	0	0
34.1	transport.p- and v-ATPases	3 (0.54%)	0	0	0	1	0	0	0	2
34.15	transport.potassium	3 (0.54%)	1	0	0	0	0	1	1	0
10.8	cell wall.pectin*esterases	2 (0.36%)	1	0	0	0	0	1	0	0
10.8.1	cell wall.pectin*esterases.PME	2 (0.36%)	1	0	0	0	0	1	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	2 (0.36%)	0	0	0	0	0	1	0	1
11.9	lipid metabolism.lipid degradation	2 (0.36%)	0	1	0	0	0	0	1	0
13	amino acid metabolism	2 (0.36%)	1	0	0	1	0	0	0	0
13.1	amino acid metabolism.synthesis	2 (0.36%)	1	0	0	1	0	0	0	0
13.1.3	amino acid metabolism.synthesis.aspartate family	2 (0.36%)	1	0	0	1	0	0	0	0
13.1.3.4	amino acid metabolism.synthesis.aspartate family.methionine	2 (0.36%)	1	0	0	1	0	0	0	0
13.1.3.4.1	amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase	2 (0.36%)	1	0	0	1	0	0	0	0
17.4	hormone metabolism.cytokinin	2 (0.36%)	0	0	0	1	0	1	0	0
17.5.2	hormone metabolism.ethylene.signal transduction	2 (0.36%)	1	0	0	0	0	1	0	0
20.1.3	stress.biotic.signalling	2 (0.36%)	1	0	0	0	1	0	0	0
20.1.3.1	stress.biotic.signalling.MLO-like	2 (0.36%)	1	0	0	0	1	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (0.36%)	0	0	0	1	1	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	2 (0.36%)	0	0	0	0	1	1	0	0
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	2 (0.36%)	1	0	0	0	0	0	1	0
27.3.60	RNA.regulation of transcription.NIN-like bZIP-related family	2 (0.36%)	0	0	0	0	2	0	0	0
29.1	protein.aa activation	2 (0.36%)	0	0	0	0	2	0	0	0
29.2.1.1.1.2.1	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L1	2 (0.36%)	0	0	0	0	2	0	0	0
29.3	protein.targeting	2 (0.36%)	1	0	0	1	0	0	0	0
29.4.1.56	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI	2 (0.36%)	2	0	0	0	0	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	2 (0.36%)	0	0	0	1	0	0	1	0
29.5.5	protein.degradation.serine protease	2 (0.36%)	0	1	0	0	0	1	0	0
30.2.17	signalling.receptor kinases.DUF 26	2 (0.36%)	0	1	0	0	0	0	1	0
31.2	cell.division	2 (0.36%)	0	0	0	2	0	0	0	0
31.3	cell.cycle	2 (0.36%)	0	0	0	1	1	0	0	0
31.4	cell.vesicle transport	2 (0.36%)	0	0	0	1	1	0	0	0
34.18	transport.unspecified anions	2 (0.36%)	0	0	0	1	1	0	0	0
34.21	transport.calcium	2 (0.36%)	0	1	0	1	0	0	0	0
10.1.4	cell wall.precursor synthesis.UGD	1 (0.18%)	0	0	0	0	0	0	1	0
10.1.6	cell wall.precursor synthesis.GAE	1 (0.18%)	0	0	0	1	0	0	0	0
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	1 (0.18%)	0	0	0	0	0	0	0	1
11.8.7	lipid metabolism.exotics (steroids, squalene etc).trans-2-enoyl-CoA reductase (NADPH)	1 (0.18%)	0	0	0	0	0	1	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.18%)	0	1	0	0	0	0	0	0
11.9.3.1	lipid metabolism.lipid degradation.lysophospholipases.phospholipase D	1 (0.18%)	0	1	0	0	0	0	0	0
11.9.4	lipid metabolism.lipid degradation.beta-oxidation	1 (0.18%)	0	0	0	0	0	0	1	0
11.9.4.13	lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase	1 (0.18%)	0	0	0	0	0	0	1	0
15	metal handling	1 (0.18%)	0	0	0	0	0	1	0	0
15.2	metal handling.binding, chelation and storage	1 (0.18%)	0	0	0	0	0	1	0	0
16.1	secondary metabolism.isoprenoids	1 (0.18%)	0	0	0	1	0	0	0	0
16.1.5	secondary metabolism.isoprenoids.terpenoids	1 (0.18%)	0	0	0	1	0	0	0	0
16.2	secondary metabolism.phenylpropanoids	1 (0.18%)	0	1	0	0	0	0	0	0
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	1 (0.18%)	0	1	0	0	0	0	0	0
16.2.1.6	secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT	1 (0.18%)	0	1	0	0	0	0	0	0
16.8	secondary metabolism.flavonoids	1 (0.18%)	0	0	0	1	0	0	0	0
16.8.1	secondary metabolism.flavonoids.anthocyanins	1 (0.18%)	0	0	0	1	0	0	0	0
16.8.1.21	secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase	1 (0.18%)	0	0	0	1	0	0	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.18%)	0	0	0	1	0	0	0	0
17.4.2	hormone metabolism.cytokinin.signal transduction	1 (0.18%)	0	0	0	0	0	1	0	0
17.6	hormone metabolism.gibberelin	1 (0.18%)	0	0	0	0	1	0	0	0
17.6.2	hormone metabolism.gibberelin.signal transduction	1 (0.18%)	0	0	0	0	1	0	0	0
17.7	hormone metabolism.jasmonate	1 (0.18%)	0	0	1	0	0	0	0	0
17.7.1	hormone metabolism.jasmonate.synthesis-degradation	1 (0.18%)	0	0	1	0	0	0	0	0
17.7.1.2	hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase	1 (0.18%)	0	0	1	0	0	0	0	0
19	tetrapyrrole synthesis	1 (0.18%)	0	0	0	0	0	1	0	0
19.14	tetrapyrrole synthesis.protochlorophyllide reductase	1 (0.18%)	0	0	0	0	0	1	0	0
20.2.2	stress.abiotic.cold	1 (0.18%)	1	0	0	0	0	0	0	0
20.2.4	stress.abiotic.touch/wounding	1 (0.18%)	0	0	0	1	0	0	0	0
23	nucleotide metabolism	1 (0.18%)	0	0	0	0	0	0	0	1
23.1	nucleotide metabolism.synthesis	1 (0.18%)	0	0	0	0	0	0	0	1
23.1.2	nucleotide metabolism.synthesis.purine	1 (0.18%)	0	0	0	0	0	0	0	1
23.1.2.1	nucleotide metabolism.synthesis.purine.amidophosphoribosyltransferase	1 (0.18%)	0	0	0	0	0	0	0	1
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	1 (0.18%)	0	0	0	0	1	0	0	0
27.3.18	RNA.regulation of transcription.E2F/DP transcription factor family	1 (0.18%)	0	0	0	0	0	1	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.18%)	0	0	0	0	0	1	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.18%)	0	0	0	0	1	0	0	0
27.3.27	RNA.regulation of transcription.NAC domain transcription factor family	1 (0.18%)	1	0	0	0	0	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	1 (0.18%)	0	0	0	1	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.18%)	0	0	0	0	0	0	0	1
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (0.18%)	0	0	0	1	0	0	0	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	1 (0.18%)	0	1	0	0	0	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.18%)	0	0	0	0	0	1	0	0
27.3.80	RNA.regulation of transcription.zf-HD	1 (0.18%)	0	0	0	0	1	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	1 (0.18%)	1	0	0	0	0	0	0	0
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	1 (0.18%)	1	0	0	0	0	0	0	0
28.1.3.2.1	DNA.synthesis/chromatin structure.histone.core.H2A	1 (0.18%)	1	0	0	0	0	0	0	0
29.2	protein.synthesis	1 (0.18%)	0	0	0	1	0	0	0	0
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.18%)	0	0	0	1	0	0	0	0
29.2.2.3	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications	1 (0.18%)	0	0	0	1	0	0	0	0
29.2.2.3.1	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs	1 (0.18%)	0	0	0	1	0	0	0	0
29.3.1	protein.targeting.nucleus	1 (0.18%)	0	0	0	1	0	0	0	0
29.3.4	protein.targeting.secretory pathway	1 (0.18%)	1	0	0	0	0	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.18%)	1	0	0	0	0	0	0	0
29.5.11	protein.degradation.ubiquitin	1 (0.18%)	1	0	0	0	0	0	0	0
29.5.11.5	protein.degradation.ubiquitin.ubiquitin protease	1 (0.18%)	1	0	0	0	0	0	0	0
29.5.7	protein.degradation.metalloprotease	1 (0.18%)	0	0	0	0	1	0	0	0
29.5.9	protein.degradation.AAA type	1 (0.18%)	0	0	0	0	0	0	0	1
30.1	signalling.in sugar and nutrient physiology	1 (0.18%)	0	0	0	0	0	0	0	1
30.2.12	signalling.receptor kinases.leucine rich repeat XII	1 (0.18%)	1	0	0	0	0	0	0	0
33.2	development.late embryogenesis abundant	1 (0.18%)	0	0	0	1	0	0	0	0
34.12	transport.metal	1 (0.18%)	0	0	0	0	0	1	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.18%)	0	0	0	1	0	0	0	0
34.2	transport.sugars	1 (0.18%)	0	1	0	0	0	0	0	0
34.2.1	transport.sugars.sucrose	1 (0.18%)	0	1	0	0	0	0	0	0
34.3	transport.amino acids	1 (0.18%)	0	0	0	0	0	0	0	1
34.9	transport.metabolite transporters at the mitochondrial membrane	1 (0.18%)	0	0	0	1	0	0	0	0