PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_59
Name: CEREGLUBOX3PSLEGA
Description: cereal glutenin box in pea (P.s.) legumin gene (legA); sequence homologous to the cereal glutenin gene control elements

#Associated genes: 147
#Associated MapMan terms: 84

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	33 (22.45%)	2	0	1	12	8	5	2	3
27.3	RNA.regulation of transcription	31 (21.09%)	2	0	1	12	7	5	2	2
29	protein	12 (8.16%)	0	0	2	3	1	3	1	2
30	signalling	10 (6.80%)	1	0	1	2	1	3	0	2
27.3.99	RNA.regulation of transcription.unclassified	6 (4.08%)	0	0	0	2	1	1	0	2
33	development	6 (4.08%)	0	0	0	1	4	1	0	0
33.99	development.unspecified	6 (4.08%)	0	0	0	1	4	1	0	0
26	misc	5 (3.40%)	0	0	1	0	2	0	1	1
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	5 (3.40%)	0	0	0	2	2	0	1	0
29.4	protein.postranslational modification	5 (3.40%)	0	0	0	2	0	2	0	1
29.7	protein.glycosylation	5 (3.40%)	0	0	1	1	1	0	1	1
22	polyamine metabolism	4 (2.72%)	0	0	0	4	0	0	0	0
22.1	polyamine metabolism.synthesis	4 (2.72%)	0	0	0	4	0	0	0	0
22.1.2	polyamine metabolism.synthesis.SAM decarboxylase	4 (2.72%)	0	0	0	4	0	0	0	0
30.1	signalling.in sugar and nutrient physiology	4 (2.72%)	0	0	0	2	0	1	0	1
34	transport	4 (2.72%)	1	0	0	1	0	0	0	2
17	hormone metabolism	3 (2.04%)	1	0	0	1	1	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	3 (2.04%)	0	0	1	0	0	2	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	3 (2.04%)	1	0	0	1	0	0	1	0
30.2	signalling.receptor kinases	3 (2.04%)	0	0	1	0	1	1	0	0
31	cell	3 (2.04%)	1	0	0	2	0	0	0	0
31.2	cell.division	3 (2.04%)	1	0	0	2	0	0	0	0
11	lipid metabolism	2 (1.36%)	1	0	0	0	0	1	0	0
17.5	hormone metabolism.ethylene	2 (1.36%)	0	0	0	1	1	0	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	2 (1.36%)	0	0	0	1	1	0	0	0
20	stress	2 (1.36%)	0	0	0	1	1	0	0	0
21	redox	2 (1.36%)	0	0	0	0	0	0	1	1
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	2 (1.36%)	0	0	0	2	0	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	2 (1.36%)	0	0	0	2	0	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	2 (1.36%)	0	0	0	0	1	1	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	2 (1.36%)	0	0	0	1	0	1	0	0
27.4	RNA.RNA binding	2 (1.36%)	0	0	0	0	1	0	0	1
29.4.1	protein.postranslational modification.kinase	2 (1.36%)	0	0	0	1	0	1	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	2 (1.36%)	0	0	0	1	0	1	0	0
29.5	protein.degradation	2 (1.36%)	0	0	1	0	0	1	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	2 (1.36%)	0	1	0	1	0	0	0	0
30.11	signalling.light	2 (1.36%)	0	0	0	0	0	1	0	1
30.2.11	signalling.receptor kinases.leucine rich repeat XI	2 (1.36%)	0	0	1	0	1	0	0	0
34.3	transport.amino acids	2 (1.36%)	1	0	0	0	0	0	0	1
8	TCA / org transformation	1 (0.68%)	0	0	1	0	0	0	0	0
11.6	lipid metabolism.lipid transfer proteins etc	1 (0.68%)	1	0	0	0	0	0	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	1 (0.68%)	0	0	0	0	0	1	0	0
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	1 (0.68%)	0	0	0	0	0	1	0	0
13	amino acid metabolism	1 (0.68%)	0	0	1	0	0	0	0	0
13.2	amino acid metabolism.degradation	1 (0.68%)	0	0	1	0	0	0	0	0
13.2.4	amino acid metabolism.degradation.branched chain group	1 (0.68%)	0	0	1	0	0	0	0	0
13.2.4.1	amino acid metabolism.degradation.branched chain group.shared	1 (0.68%)	0	0	1	0	0	0	0	0
16	secondary metabolism	1 (0.68%)	0	0	0	1	0	0	0	0
16.10	secondary metabolism.simple phenols	1 (0.68%)	0	0	0	1	0	0	0	0
17.2	hormone metabolism.auxin	1 (0.68%)	1	0	0	0	0	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (0.68%)	1	0	0	0	0	0	0	0
17.5.1.1	hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase	1 (0.68%)	0	0	0	1	0	0	0	0
19	tetrapyrrole synthesis	1 (0.68%)	0	0	0	0	0	0	0	1
19.14	tetrapyrrole synthesis.protochlorophyllide reductase	1 (0.68%)	0	0	0	0	0	0	0	1
20.1	stress.biotic	1 (0.68%)	0	0	0	1	0	0	0	0
20.2	stress.abiotic	1 (0.68%)	0	0	0	0	1	0	0	0
20.2.3	stress.abiotic.drought/salt	1 (0.68%)	0	0	0	0	1	0	0	0
21.1	redox.thioredoxin	1 (0.68%)	0	0	0	0	0	0	0	1
21.2	redox.ascorbate and glutathione	1 (0.68%)	0	0	0	0	0	0	1	0
21.2.1	redox.ascorbate and glutathione.ascorbate	1 (0.68%)	0	0	0	0	0	0	1	0
21.2.1.2	redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase	1 (0.68%)	0	0	0	0	0	0	1	0
26.10	misc.cytochrome P450	1 (0.68%)	0	0	1	0	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (0.68%)	0	0	0	0	1	0	0	0
26.28	misc.GDSL-motif lipase	1 (0.68%)	0	0	0	0	0	0	1	0
26.3	misc.gluco-, galacto- and mannosidases	1 (0.68%)	0	0	0	0	0	0	0	1
26.7	misc.oxidases - copper, flavone etc	1 (0.68%)	0	0	0	0	1	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (0.68%)	0	0	0	1	0	0	0	0
27.3.19	RNA.regulation of transcription.EIN3-like(EIL) transcription factor family	1 (0.68%)	0	0	0	1	0	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.68%)	1	0	0	0	0	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	1 (0.68%)	0	0	0	0	1	0	0	0
27.3.57	RNA.regulation of transcription.JUMONJI family	1 (0.68%)	0	0	0	0	1	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.68%)	0	0	0	0	1	0	0	0
27.3.63	RNA.regulation of transcription.PHD finger transcription factor	1 (0.68%)	0	0	0	0	0	1	0	0
28.1	DNA.synthesis/chromatin structure	1 (0.68%)	0	0	0	1	0	0	0	0
29.2.1.1.1.2.33	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L33	1 (0.68%)	0	0	0	0	1	0	0	0
29.2.1.2.2.32	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32	1 (0.68%)	0	0	0	1	0	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (0.68%)	0	0	0	0	0	1	0	0
8.1	TCA / org transformation.TCA	1 (0.68%)	0	0	1	0	0	0	0	0
30.5	signalling.G-proteins	1 (0.68%)	1	0	0	0	0	0	0	0
34.7	transport.phosphate	1 (0.68%)	0	0	0	0	0	0	0	1
34.99	transport.misc	1 (0.68%)	0	0	0	1	0	0	0	0
8.1.1	TCA / org transformation.TCA.pyruvate DH	1 (0.68%)	0	0	1	0	0	0	0	0
8.1.1.1	TCA / org transformation.TCA.pyruvate DH.E1	1 (0.68%)	0	0	1	0	0	0	0	0
28	DNA	1 (0.68%)	0	0	0	1	0	0	0	0