PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_579
Name: WRECSAA01
Description: Wound-responsive element (WRE) found in the promoter region of cucumber ascorbate oxidase gene, CsAAO1; Binding site of proteins in tobacco nuclear extracts

#Associated genes: 87
#Associated MapMan terms: 62

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	23 (26.44%)	0	1	3	4	7	4	0	4
27.3	RNA.regulation of transcription	20 (22.99%)	0	0	2	4	6	4	0	4
28	DNA	13 (14.94%)	0	0	1	5	3	2	0	2
28.1	DNA.synthesis/chromatin structure	12 (13.79%)	0	0	1	5	2	2	0	2
34	transport	7 (8.05%)	1	0	0	2	1	1	0	2
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	6 (6.90%)	0	0	0	1	2	2	0	1
29	protein	4 (4.60%)	0	0	0	0	3	1	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	3 (3.45%)	0	0	0	0	2	1	0	0
27.4	RNA.RNA binding	3 (3.45%)	0	1	1	0	1	0	0	0
30	signalling	3 (3.45%)	0	0	0	1	1	1	0	0
1	PS	2 (2.30%)	0	0	0	0	2	0	0	0
1.1	PS.lightreaction	2 (2.30%)	0	0	0	0	2	0	0	0
1.1.3	PS.lightreaction.cytochrome b6/f	2 (2.30%)	0	0	0	0	2	0	0	0
1.1.3.4	PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)	2 (2.30%)	0	0	0	0	2	0	0	0
10	cell wall	2 (2.30%)	0	0	0	0	0	1	1	0
10.6	cell wall.degradation	2 (2.30%)	0	0	0	0	0	1	1	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	2 (2.30%)	0	0	0	0	0	1	1	0
26	misc	2 (2.30%)	0	0	0	0	0	2	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	2 (2.30%)	0	0	0	2	0	0	0	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	2 (2.30%)	0	0	0	0	2	0	0	0
29.3	protein.targeting	2 (2.30%)	0	0	0	0	2	0	0	0
29.3.1	protein.targeting.nucleus	2 (2.30%)	0	0	0	0	2	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	2 (2.30%)	0	0	0	2	0	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	2 (2.30%)	0	0	0	0	1	0	0	1
34.9	transport.metabolite transporters at the mitochondrial membrane	2 (2.30%)	0	0	0	1	0	0	0	1
16	secondary metabolism	1 (1.15%)	1	0	0	0	0	0	0	0
16.1	secondary metabolism.isoprenoids	1 (1.15%)	1	0	0	0	0	0	0	0
16.1.5	secondary metabolism.isoprenoids.terpenoids	1 (1.15%)	1	0	0	0	0	0	0	0
20	stress	1 (1.15%)	1	0	0	0	0	0	0	0
20.1	stress.biotic	1 (1.15%)	1	0	0	0	0	0	0	0
23	nucleotide metabolism	1 (1.15%)	0	0	0	0	1	0	0	0
23.3	nucleotide metabolism.salvage	1 (1.15%)	0	0	0	0	1	0	0	0
23.3.2	nucleotide metabolism.salvage.nucleoside kinases	1 (1.15%)	0	0	0	0	1	0	0	0
23.3.2.3	nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase	1 (1.15%)	0	0	0	0	1	0	0	0
26.16	misc.myrosinases-lectin-jacalin	1 (1.15%)	0	0	0	0	0	1	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (1.15%)	0	0	0	0	0	1	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (1.15%)	0	0	1	0	0	0	0	0
27.3.16	RNA.regulation of transcription.CCAAT box binding factor family, HAP5	1 (1.15%)	0	0	1	0	0	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (1.15%)	0	0	0	0	0	0	0	1
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (1.15%)	0	0	0	0	0	0	0	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (1.15%)	0	0	0	1	0	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	1 (1.15%)	0	0	0	0	0	1	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (1.15%)	0	0	0	0	0	0	0	1
28.2	DNA.repair	1 (1.15%)	0	0	0	0	1	0	0	0
29.4	protein.postranslational modification	1 (1.15%)	0	0	0	0	0	1	0	0
29.4.1	protein.postranslational modification.kinase	1 (1.15%)	0	0	0	0	0	1	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	1 (1.15%)	0	0	0	0	0	1	0	0
29.5	protein.degradation	1 (1.15%)	0	0	0	0	1	0	0	0
29.5.5	protein.degradation.serine protease	1 (1.15%)	0	0	0	0	1	0	0	0
30.11	signalling.light	1 (1.15%)	0	0	0	1	0	0	0	0
30.11.1	signalling.light.COP9 signalosome	1 (1.15%)	0	0	0	1	0	0	0	0
30.2	signalling.receptor kinases	1 (1.15%)	0	0	0	0	0	1	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (1.15%)	0	0	0	0	0	1	0	0
30.4	signalling.phosphinositides	1 (1.15%)	0	0	0	0	1	0	0	0
31	cell	1 (1.15%)	0	0	0	1	0	0	0	0
31.1	cell.organisation	1 (1.15%)	0	0	0	1	0	0	0	0
33	development	1 (1.15%)	0	0	0	0	0	0	0	1
33.99	development.unspecified	1 (1.15%)	0	0	0	0	0	0	0	1
34.13	transport.peptides and oligopeptides	1 (1.15%)	1	0	0	0	0	0	0	0
34.19	transport.Major Intrinsic Proteins	1 (1.15%)	0	0	0	1	0	0	0	0
34.19.1	transport.Major Intrinsic Proteins.PIP	1 (1.15%)	0	0	0	1	0	0	0	0
34.7	transport.phosphate	1 (1.15%)	0	0	0	0	0	1	0	0