MapMan terms associated with a binding site
- Binding site
- Motif_578
- Name
- BBOXSITE1STPAT
- Description
- 10 base pair motif (site 1) within the B-box found in the potato patatin gene promoter; Involved in potato tuber-specific and sucrose-inducible gene expression; Storekeeper (STK) binds to this region and regulates patatin expression in potato
- #Associated genes
- 23
- #Associated MapMan terms
- 36
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MapMan | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
---|---|---|---|---|---|---|---|---|---|---|---|---|
27 | RNA | 8 (34.78%) | 0 | 0 | 0 | 0 | 4 | 0 | 1 | 0 | 0 | 3 |
27.3 | RNA.regulation of transcription | 5 (21.74%) | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 1 |
27.3.67 | RNA.regulation of transcription.putative transcription regulator | 3 (13.04%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 1 |
30 | signalling | 3 (13.04%) | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 |
27.3.24 | RNA.regulation of transcription.MADS box transcription factor family | 2 (8.70%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
29 | protein | 2 (8.70%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
29.4 | protein.postranslational modification | 2 (8.70%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
30.2 | signalling.receptor kinases | 2 (8.70%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
30.2.17 | signalling.receptor kinases.DUF 26 | 2 (8.70%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
13 | amino acid metabolism | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
13.1 | amino acid metabolism.synthesis | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
13.1.6 | amino acid metabolism.synthesis.aromatic aa | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
13.1.6.1 | amino acid metabolism.synthesis.aromatic aa.chorismate | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
13.1.6.1.5 | amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
17 | hormone metabolism | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
17.4 | hormone metabolism.cytokinin | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
17.4.2 | hormone metabolism.cytokinin.signal transduction | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
20 | stress | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
20.2 | stress.abiotic | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
26 | misc | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
26.16 | misc.myrosinases-lectin-jacalin | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
27.1 | RNA.processing | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
27.1.1 | RNA.processing.splicing | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
27.2 | RNA.transcription | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
27.4 | RNA.RNA binding | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
28 | DNA | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
28.1 | DNA.synthesis/chromatin structure | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
28.1.3 | DNA.synthesis/chromatin structure.histone | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
29.4.1 | protein.postranslational modification.kinase | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
29.4.1.57 | protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
30.2.24 | signalling.receptor kinases.S-locus glycoprotein like | 1 (4.35%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
30.5 | signalling.G-proteins | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
31 | cell | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
31.1 | cell.organisation | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
34 | transport | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
34.18 | transport.unspecified anions | 1 (4.35%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |