PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_578
Name: BBOXSITE1STPAT
Description: 10 base pair motif (site 1) within the B-box found in the potato patatin gene promoter; Involved in potato tuber-specific and sucrose-inducible gene expression; Storekeeper (STK) binds to this region and regulates patatin expression in potato

#Associated genes: 23
#Associated InterPro terms: 59

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InterPro	Description	#Associated genes	cme	egr	gma	ptr	ppe	vvi
IPR027267	Arfaptin homology (AH) domain/BAR domain	3 (13.04%)	0	0	2	0	0	1
IPR004148	BAR domain	3 (13.04%)	0	0	2	0	0	1
IPR013320	Concanavalin A-like lectin/glucanase, subgroup	2 (8.70%)	0	1	0	0	0	1
IPR012677	Nucleotide-binding, alpha-beta plait	2 (8.70%)	0	0	0	0	1	1
IPR000719	Protein kinase domain	2 (8.70%)	0	1	0	0	0	1
IPR017441	Protein kinase, ATP binding site	2 (8.70%)	0	1	0	0	0	1
IPR011009	Protein kinase-like domain	2 (8.70%)	0	1	0	0	0	1
IPR000504	RNA recognition motif domain	2 (8.70%)	0	0	0	0	1	1
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain	2 (8.70%)	0	1	0	0	0	1
IPR008271	Serine/threonine-protein kinase, active site	2 (8.70%)	0	1	0	0	0	1
IPR002487	Transcription factor, K-box	2 (8.70%)	0	0	2	0	0	0
IPR002100	Transcription factor, MADS-box	2 (8.70%)	0	0	2	0	0	0
IPR007188	ARP2/3 complex, 34kDa subunit (p34-Arc)	1 (4.35%)	0	0	0	1	0	0
IPR017956	AT hook, DNA-binding motif	1 (4.35%)	0	0	0	0	1	0
IPR020478	AT hook-like	1 (4.35%)	0	0	0	0	1	0
IPR003609	Apple-like	1 (4.35%)	0	1	0	0	0	0
IPR003103	BAG domain	1 (4.35%)	0	0	0	1	0	0
IPR001480	Bulb-type lectin domain	1 (4.35%)	0	1	0	0	0	0
IPR000644	CBS domain	1 (4.35%)	0	0	0	0	0	1
IPR006189	CHASE	1 (4.35%)	0	0	0	1	0	0
IPR011006	CheY-like superfamily	1 (4.35%)	0	0	0	1	0	0
IPR014743	Chloride channel, core	1 (4.35%)	0	0	0	0	0	1
IPR001807	Chloride channel, voltage gated	1 (4.35%)	0	0	0	0	0	1
IPR008985	Concanavalin A-like lectin/glucanases superfamily	1 (4.35%)	0	0	0	0	0	1
IPR000268	DNA-directed RNA polymerase, subunit N/Rpb10	1 (4.35%)	0	0	0	0	0	1
IPR025398	Domain of unknown function DUF4371	1 (4.35%)	0	0	0	0	1	0
IPR002109	Glutaredoxin	1 (4.35%)	1	0	0	0	0	0
IPR011905	Glutaredoxin-like, plant II	1 (4.35%)	1	0	0	0	0	0
IPR008906	HAT dimerisation domain, C-terminal	1 (4.35%)	0	0	0	0	1	0
IPR000116	High mobility group, HMG-I/HMG-Y	1 (4.35%)	0	0	0	0	1	0
IPR003594	Histidine kinase-like ATPase, ATP-binding domain	1 (4.35%)	0	0	0	1	0	0
IPR009057	Homeodomain-like	1 (4.35%)	0	0	0	0	0	1
IPR001220	Legume lectin domain	1 (4.35%)	0	0	0	0	0	1
IPR005818	Linker histone H1/H5, domain H15	1 (4.35%)	0	0	0	0	1	0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	1 (4.35%)	0	0	0	0	0	1
IPR013227	PAN-2 domain	1 (4.35%)	0	1	0	0	0	0
IPR005512	PRONE domain	1 (4.35%)	0	0	0	1	0	0
IPR002483	PWI domain	1 (4.35%)	0	0	0	0	0	1
IPR015655	Protein phosphatase 2C	1 (4.35%)	0	0	0	0	0	1
IPR001932	Protein phosphatase 2C (PP2C)-like domain	1 (4.35%)	0	0	0	0	0	1
IPR000222	Protein phosphatase 2C, manganese/magnesium aspartate binding site	1 (4.35%)	0	0	0	0	0	1
IPR000801	Putative esterase	1 (4.35%)	0	0	0	0	0	1
IPR023580	RNA polymerase subunit RPB10	1 (4.35%)	0	0	0	0	0	1
IPR020789	RNA polymerases, subunit N, zinc binding site	1 (4.35%)	0	0	0	0	0	1
IPR003954	RNA recognition motif domain, eukaryote	1 (4.35%)	0	0	0	0	1	0
IPR008111	RNA-binding motif protein 8	1 (4.35%)	0	0	0	0	1	0
IPR012337	Ribonuclease H-like domain	1 (4.35%)	0	0	0	0	1	0
IPR014186	S-formylglutathione hydrolase	1 (4.35%)	0	0	0	0	0	1
IPR000858	S-locus glycoprotein	1 (4.35%)	0	1	0	0	0	0
IPR000623	Shikimate kinase/Threonine synthase-like 1	1 (4.35%)	0	0	0	0	0	1
IPR003661	Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain	1 (4.35%)	0	0	0	1	0	0
IPR005467	Signal transduction histidine kinase, core	1 (4.35%)	0	0	0	1	0	0
IPR009082	Signal transduction histidine kinase, homodimeric domain	1 (4.35%)	0	0	0	1	0	0
IPR004358	Signal transduction histidine kinase-related protein, C-terminal	1 (4.35%)	0	0	0	1	0	0
IPR001789	Signal transduction response regulator, receiver domain	1 (4.35%)	0	0	0	1	0	0
IPR012336	Thioredoxin-like fold	1 (4.35%)	1	0	0	0	0	0
IPR000626	Ubiquitin domain	1 (4.35%)	0	0	0	1	0	0
IPR011991	Winged helix-turn-helix DNA-binding domain	1 (4.35%)	0	0	0	0	1	0
IPR006580	Zinc finger, TTF-type	1 (4.35%)	0	0	0	0	1	0