Gene Ontology terms associated with a binding site

Binding site
Motif_578
Name
BBOXSITE1STPAT
Description
10 base pair motif (site 1) within the B-box found in the potato patatin gene promoter; Involved in potato tuber-specific and sucrose-inducible gene expression; Storekeeper (STK) binds to this region and regulates patatin expression in potato
#Associated genes
23
#Associated GO terms
511
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding16 (69.57%)0001423006
GO:1901363heterocyclic compound binding12 (52.17%)0001213005
GO:0097159organic cyclic compound binding12 (52.17%)0001213005
GO:0003824catalytic activity9 (39.13%)0011010006
GO:0005515protein binding8 (34.78%)0000421001
GO:0003676nucleic acid binding7 (30.43%)0000203002
GO:1901265nucleoside phosphate binding7 (30.43%)0001011004
GO:0000166nucleotide binding7 (30.43%)0001011004
GO:0036094small molecule binding7 (30.43%)0001011004
GO:0016740transferase activity6 (26.09%)0001010004
GO:0030554adenyl nucleotide binding5 (21.74%)0001010003
GO:0043167ion binding5 (21.74%)0001010003
GO:0017076purine nucleotide binding5 (21.74%)0001010003
GO:0016772transferase activity, transferring phosphorus-containing groups5 (21.74%)0001010003
GO:0005524ATP binding4 (17.39%)0001010002
GO:0003677DNA binding4 (17.39%)0000201001
GO:0032559adenyl ribonucleotide binding4 (17.39%)0001010002
GO:0043168anion binding4 (17.39%)0001010002
GO:0097367carbohydrate derivative binding4 (17.39%)0001010002
GO:0016301kinase activity4 (17.39%)0001010002
GO:0001882nucleoside binding4 (17.39%)0001010002
GO:0016773phosphotransferase activity, alcohol group as acceptor4 (17.39%)0001010002
GO:0001883purine nucleoside binding4 (17.39%)0001010002
GO:0032550purine ribonucleoside binding4 (17.39%)0001010002
GO:0035639purine ribonucleoside triphosphate binding4 (17.39%)0001010002
GO:0032555purine ribonucleotide binding4 (17.39%)0001010002
GO:0032549ribonucleoside binding4 (17.39%)0001010002
GO:0032553ribonucleotide binding4 (17.39%)0001010002
GO:0016787hydrolase activity3 (13.04%)0000010002
GO:0016788hydrolase activity, acting on ester bonds3 (13.04%)0000010002
GO:0046983protein dimerization activity3 (13.04%)0000201000
GO:0004672protein kinase activity3 (13.04%)0001010001
GO:0001071nucleic acid binding transcription factor activity2 (8.70%)0000200000
GO:0016791phosphatase activity2 (8.70%)0000010001
GO:0004721phosphoprotein phosphatase activity2 (8.70%)0000010001
GO:0042578phosphoric ester hydrolase activity2 (8.70%)0000010001
GO:0004674protein serine/threonine kinase activity2 (8.70%)0001000001
GO:0043565sequence-specific DNA binding2 (8.70%)0000200000
GO:0003700sequence-specific DNA binding transcription factor activity2 (8.70%)0000200000
GO:0003899DNA-directed RNA polymerase activity1 (4.35%)0000000001
GO:0003723RNA binding1 (4.35%)0000001000
GO:0034062RNA polymerase activity1 (4.35%)0000000001
GO:0005088Ras guanyl-nucleotide exchange factor activity1 (4.35%)0000010000
GO:0005089Rho guanyl-nucleotide exchange factor activity1 (4.35%)0000010000
GO:0018738S-formylglutathione hydrolase activity1 (4.35%)0000000001
GO:0005253anion channel activity1 (4.35%)0000000001
GO:0008509anion transmembrane transporter activity1 (4.35%)0000000001
GO:0030246carbohydrate binding1 (4.35%)0000000001
GO:0043169cation binding1 (4.35%)0000000001
GO:0015267channel activity1 (4.35%)0000000001
GO:0051087chaperone binding1 (4.35%)0000010000
GO:0005254chloride channel activity1 (4.35%)0000000001
GO:0015108chloride transmembrane transporter activity1 (4.35%)0000000001
GO:0019955cytokine binding1 (4.35%)0000010000
GO:0009884cytokinin receptor activity1 (4.35%)0000010000
GO:0015036disulfide oxidoreductase activity1 (4.35%)0010000000
GO:0009055electron carrier activity1 (4.35%)0010000000
GO:0019899enzyme binding1 (4.35%)0000010000
GO:0022836gated channel activity1 (4.35%)0000000001
GO:0005085guanyl-nucleotide exchange factor activity1 (4.35%)0000010000
GO:0015103inorganic anion transmembrane transporter activity1 (4.35%)0000000001
GO:0005216ion channel activity1 (4.35%)0000000001
GO:0022839ion gated channel activity1 (4.35%)0000000001
GO:0015075ion transmembrane transporter activity1 (4.35%)0000000001
GO:0019900kinase binding1 (4.35%)0000010000
GO:0046872metal ion binding1 (4.35%)0000000001
GO:0060089molecular transducer activity1 (4.35%)0000010000
GO:0016779nucleotidyltransferase activity1 (4.35%)0000000001
GO:0005034osmosensor activity1 (4.35%)0000010000
GO:0016491oxidoreductase activity1 (4.35%)0010000000
GO:0016667oxidoreductase activity, acting on a sulfur group of donors1 (4.35%)0010000000
GO:0022803passive transmembrane transporter activity1 (4.35%)0000000001
GO:0000156phosphorelay response regulator activity1 (4.35%)0000010000
GO:0000155phosphorelay sensor kinase activity1 (4.35%)0000010000
GO:0016775phosphotransferase activity, nitrogenous group as acceptor1 (4.35%)0000010000
GO:0015035protein disulfide oxidoreductase activity1 (4.35%)0010000000
GO:0004673protein histidine kinase activity1 (4.35%)0000010000
GO:0043424protein histidine kinase binding1 (4.35%)0000010000
GO:0019901protein kinase binding1 (4.35%)0000010000
GO:0004722protein serine/threonine phosphatase activity1 (4.35%)0000000001
GO:0004872receptor activity1 (4.35%)0000010000
GO:0004765shikimate kinase activity1 (4.35%)0000000001
GO:0004871signal transducer activity1 (4.35%)0000010000
GO:0038023signaling receptor activity1 (4.35%)0000010000
GO:0022838substrate-specific channel activity1 (4.35%)0000000001
GO:0022891substrate-specific transmembrane transporter activity1 (4.35%)0000000001
GO:0022892substrate-specific transporter activity1 (4.35%)0000000001
GO:0016790thiolester hydrolase activity1 (4.35%)0000000001
GO:0016746transferase activity, transferring acyl groups1 (4.35%)0000000001
GO:0046914transition metal ion binding1 (4.35%)0000000001
GO:0009885transmembrane histidine kinase cytokinin receptor activity1 (4.35%)0000010000
GO:0009784transmembrane receptor histidine kinase activity1 (4.35%)0000010000
GO:0019199transmembrane receptor protein kinase activity1 (4.35%)0000010000
GO:0004888transmembrane signaling receptor activity1 (4.35%)0000010000
GO:0022857transmembrane transporter activity1 (4.35%)0000000001
GO:0005215transporter activity1 (4.35%)0000000001
GO:0008308voltage-gated anion channel activity1 (4.35%)0000000001
GO:0022832voltage-gated channel activity1 (4.35%)0000000001
GO:0005247voltage-gated chloride channel activity1 (4.35%)0000000001
GO:0005244voltage-gated ion channel activity1 (4.35%)0000000001
GO:0008270zinc ion binding1 (4.35%)0000000001

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process17 (73.91%)0011242007
GO:0008152metabolic process13 (56.52%)0001212007
GO:0044699single-organism process13 (56.52%)0011241004
GO:0044237cellular metabolic process12 (52.17%)0001212006
GO:0071704organic substance metabolic process12 (52.17%)0001212006
GO:0044238primary metabolic process11 (47.83%)0001212005
GO:0044763single-organism cellular process11 (47.83%)0011041004
GO:0044260cellular macromolecule metabolic process10 (43.48%)0001212004
GO:0043170macromolecule metabolic process10 (43.48%)0001212004
GO:0065007biological regulation8 (34.78%)0010231001
GO:0006725cellular aromatic compound metabolic process8 (34.78%)0000212003
GO:0006807nitrogen compound metabolic process8 (34.78%)0000212003
GO:1901360organic cyclic compound metabolic process8 (34.78%)0000212003
GO:0050789regulation of biological process8 (34.78%)0010231001
GO:0050794regulation of cellular process8 (34.78%)0010231001
GO:0016070RNA metabolic process7 (30.43%)0000212002
GO:0034641cellular nitrogen compound metabolic process7 (30.43%)0000212002
GO:0010467gene expression7 (30.43%)0000212002
GO:0046483heterocycle metabolic process7 (30.43%)0000212002
GO:0090304nucleic acid metabolic process7 (30.43%)0000212002
GO:0006139nucleobase-containing compound metabolic process7 (30.43%)0000212002
GO:0019438aromatic compound biosynthetic process6 (26.09%)0000211002
GO:0009058biosynthetic process6 (26.09%)0000211002
GO:0044249cellular biosynthetic process6 (26.09%)0000211002
GO:0032501multicellular organismal process6 (26.09%)0001220001
GO:1901362organic cyclic compound biosynthetic process6 (26.09%)0000211002
GO:1901576organic substance biosynthetic process6 (26.09%)0000211002
GO:0032774RNA biosynthetic process5 (21.74%)0000211001
GO:0034645cellular macromolecule biosynthetic process5 (21.74%)0000211001
GO:0044271cellular nitrogen compound biosynthetic process5 (21.74%)0000211001
GO:0032502developmental process5 (21.74%)0000220001
GO:0018130heterocycle biosynthetic process5 (21.74%)0000211001
GO:0009059macromolecule biosynthetic process5 (21.74%)0000211001
GO:0034654nucleobase-containing compound biosynthetic process5 (21.74%)0000211001
GO:0044707single-multicellular organism process5 (21.74%)0001210001
GO:0044767single-organism developmental process5 (21.74%)0000220001
GO:0006351transcription, DNA-templated5 (21.74%)0000211001
GO:0048856anatomical structure development4 (17.39%)0000220000
GO:0016043cellular component organization4 (17.39%)0000021001
GO:0071840cellular component organization or biogenesis4 (17.39%)0000021001
GO:0044267cellular protein metabolic process4 (17.39%)0001010002
GO:0006464cellular protein modification process4 (17.39%)0001010002
GO:0043412macromolecule modification4 (17.39%)0001010002
GO:0051704multi-organism process4 (17.39%)0001020001
GO:0007275multicellular organismal development4 (17.39%)0000210001
GO:0006796phosphate-containing compound metabolic process4 (17.39%)0001010002
GO:0006793phosphorus metabolic process4 (17.39%)0001010002
GO:0009791post-embryonic development4 (17.39%)0000210001
GO:0019538protein metabolic process4 (17.39%)0001010002
GO:0036211protein modification process4 (17.39%)0001010002
GO:2001141regulation of RNA biosynthetic process4 (17.39%)0000211000
GO:0051252regulation of RNA metabolic process4 (17.39%)0000211000
GO:0065008regulation of biological quality4 (17.39%)0010020001
GO:0009889regulation of biosynthetic process4 (17.39%)0000211000
GO:0031326regulation of cellular biosynthetic process4 (17.39%)0000211000
GO:2000112regulation of cellular macromolecule biosynthetic process4 (17.39%)0000211000
GO:0031323regulation of cellular metabolic process4 (17.39%)0000211000
GO:0010468regulation of gene expression4 (17.39%)0000211000
GO:0010556regulation of macromolecule biosynthetic process4 (17.39%)0000211000
GO:0060255regulation of macromolecule metabolic process4 (17.39%)0000211000
GO:0019222regulation of metabolic process4 (17.39%)0000211000
GO:0051171regulation of nitrogen compound metabolic process4 (17.39%)0000211000
GO:0019219regulation of nucleobase-containing compound metabolic process4 (17.39%)0000211000
GO:0080090regulation of primary metabolic process4 (17.39%)0000211000
GO:0006355regulation of transcription, DNA-dependent4 (17.39%)0000211000
GO:0000003reproduction4 (17.39%)0001210000
GO:0022414reproductive process4 (17.39%)0001210000
GO:0042221response to chemical4 (17.39%)0000010003
GO:0050896response to stimulus4 (17.39%)0000010003
GO:0007154cell communication3 (13.04%)0001010001
GO:0003006developmental process involved in reproduction3 (13.04%)0000210000
GO:0048513organ development3 (13.04%)0000210000
GO:0006996organelle organization3 (13.04%)0000011001
GO:0016310phosphorylation3 (13.04%)0001010001
GO:0048827phyllome development3 (13.04%)0000210000
GO:0006468protein phosphorylation3 (13.04%)0001010001
GO:2000241regulation of reproductive process3 (13.04%)0000210000
GO:0009719response to endogenous stimulus3 (13.04%)0000010002
GO:0009725response to hormone3 (13.04%)0000010002
GO:0010033response to organic substance3 (13.04%)0000010002
GO:1901700response to oxygen-containing compound3 (13.04%)0000010002
GO:0048367shoot system development3 (13.04%)0000210000
GO:0044702single organism reproductive process3 (13.04%)0000210000
GO:0048731system development3 (13.04%)0000210000
GO:0006396RNA processing2 (8.70%)0000001001
GO:0009653anatomical structure morphogenesis2 (8.70%)0000020000
GO:0006820anion transport2 (8.70%)0000010001
GO:0048440carpel development2 (8.70%)0000200000
GO:0022607cellular component assembly2 (8.70%)0000011000
GO:0044085cellular component biogenesis2 (8.70%)0000011000
GO:0034622cellular macromolecular complex assembly2 (8.70%)0000011000
GO:0048610cellular process involved in reproduction2 (8.70%)0001010000
GO:0070887cellular response to chemical stimulus2 (8.70%)0000010001
GO:0071495cellular response to endogenous stimulus2 (8.70%)0000010001
GO:0032870cellular response to hormone stimulus2 (8.70%)0000010001
GO:0071310cellular response to organic substance2 (8.70%)0000010001
GO:1901701cellular response to oxygen-containing compound2 (8.70%)0000010001
GO:0051716cellular response to stimulus2 (8.70%)0000010001
GO:0006952defense response2 (8.70%)0000010001
GO:0042742defense response to bacterium2 (8.70%)0000010001
GO:0098542defense response to other organism2 (8.70%)0000010001
GO:0009567double fertilization forming a zygote and endosperm2 (8.70%)0000200000
GO:0051234establishment of localization2 (8.70%)0000010001
GO:0009566fertilization2 (8.70%)0000200000
GO:0048437floral organ development2 (8.70%)0000200000
GO:0048438floral whorl development2 (8.70%)0000200000
GO:0009908flower development2 (8.70%)0000200000
GO:0010154fruit development2 (8.70%)0000200000
GO:0048467gynoecium development2 (8.70%)0000200000
GO:0042592homeostatic process2 (8.70%)0010010000
GO:0009755hormone-mediated signaling pathway2 (8.70%)0000010001
GO:0015698inorganic anion transport2 (8.70%)0000010001
GO:0006811ion transport2 (8.70%)0000010001
GO:0051179localization2 (8.70%)0000010001
GO:0065003macromolecular complex assembly2 (8.70%)0000011000
GO:0043933macromolecular complex subunit organization2 (8.70%)0000011000
GO:0044706multi-multicellular organism process2 (8.70%)0001010000
GO:0044703multi-organism reproductive process2 (8.70%)0001010000
GO:0048481ovule development2 (8.70%)0000200000
GO:0035670plant-type ovary development2 (8.70%)0000200000
GO:0009856pollination2 (8.70%)0001010000
GO:0048569post-embryonic organ development2 (8.70%)0000200000
GO:0006461protein complex assembly2 (8.70%)0000011000
GO:0070271protein complex biogenesis2 (8.70%)0000011000
GO:0071822protein complex subunit organization2 (8.70%)0000011000
GO:0051128regulation of cellular component organization2 (8.70%)0000020000
GO:0050793regulation of developmental process2 (8.70%)0000020000
GO:0080155regulation of double fertilization forming a zygote and endosperm2 (8.70%)0000200000
GO:0080154regulation of fertilization2 (8.70%)0000200000
GO:0051239regulation of multicellular organismal process2 (8.70%)0000020000
GO:0048608reproductive structure development2 (8.70%)0000200000
GO:0061458reproductive system development2 (8.70%)0000200000
GO:0009737response to abscisic acid2 (8.70%)0000000002
GO:0097305response to alcohol2 (8.70%)0000000002
GO:0009617response to bacterium2 (8.70%)0000010001
GO:0009607response to biotic stimulus2 (8.70%)0000010001
GO:0010035response to inorganic substance2 (8.70%)0000010001
GO:0033993response to lipid2 (8.70%)0000000002
GO:0051707response to other organism2 (8.70%)0000010001
GO:0006950response to stress2 (8.70%)0000010001
GO:0048316seed development2 (8.70%)0000200000
GO:0009845seed germination2 (8.70%)0000010001
GO:0090351seedling development2 (8.70%)0000010001
GO:0019953sexual reproduction2 (8.70%)0000200000
GO:0007165signal transduction2 (8.70%)0000010001
GO:0023052signaling2 (8.70%)0000010001
GO:0044700single organism signaling2 (8.70%)0000010001
GO:0044710single-organism metabolic process2 (8.70%)0000000002
GO:0044765single-organism transport2 (8.70%)0000010001
GO:0044281small molecule metabolic process2 (8.70%)0000000002
GO:0006810transport2 (8.70%)0000010001
GO:0071103DNA conformation change1 (4.35%)0000001000
GO:0006259DNA metabolic process1 (4.35%)0000001000
GO:0006323DNA packaging1 (4.35%)0000001000
GO:0009738abscisic acid-activated signaling pathway1 (4.35%)0000000001
GO:0030036actin cytoskeleton organization1 (4.35%)0000010000
GO:0007015actin filament organization1 (4.35%)0000010000
GO:0030041actin filament polymerization1 (4.35%)0000010000
GO:0030029actin filament-based process1 (4.35%)0000010000
GO:0008154actin polymerization or depolymerization1 (4.35%)0000010000
GO:0007568aging1 (4.35%)0000010000
GO:0046185aldehyde catabolic process1 (4.35%)0000000001
GO:0006915apoptotic process1 (4.35%)0000010000
GO:0009073aromatic amino acid family biosynthetic process1 (4.35%)0000000001
GO:0009072aromatic amino acid family metabolic process1 (4.35%)0000000001
GO:0033500carbohydrate homeostasis1 (4.35%)0000010000
GO:0046394carboxylic acid biosynthetic process1 (4.35%)0000000001
GO:0019752carboxylic acid metabolic process1 (4.35%)0000000001
GO:0009056catabolic process1 (4.35%)0000000001
GO:0008219cell death1 (4.35%)0000010000
GO:0048468cell development1 (4.35%)0000010000
GO:0030154cell differentiation1 (4.35%)0000010000
GO:0016049cell growth1 (4.35%)0000010000
GO:0000902cell morphogenesis1 (4.35%)0000010000
GO:0000904cell morphogenesis involved in differentiation1 (4.35%)0000010000
GO:0008037cell recognition1 (4.35%)0001000000
GO:0045454cell redox homeostasis1 (4.35%)0010000000
GO:0009932cell tip growth1 (4.35%)0000010000
GO:0006081cellular aldehyde metabolic process1 (4.35%)0000000001
GO:0008652cellular amino acid biosynthetic process1 (4.35%)0000000001
GO:0006520cellular amino acid metabolic process1 (4.35%)0000000001
GO:0044248cellular catabolic process1 (4.35%)0000000001
GO:0032989cellular component morphogenesis1 (4.35%)0000010000
GO:0048869cellular developmental process1 (4.35%)0000010000
GO:0019725cellular homeostasis1 (4.35%)0010000000
GO:0043623cellular protein complex assembly1 (4.35%)0000010000
GO:0071214cellular response to abiotic stimulus1 (4.35%)0000010000
GO:0071215cellular response to abscisic acid stimulus1 (4.35%)0000000001
GO:0097306cellular response to alcohol1 (4.35%)0000000001
GO:0071322cellular response to carbohydrate stimulus1 (4.35%)0000010000
GO:0071368cellular response to cytokinin stimulus1 (4.35%)0000010000
GO:0071324cellular response to disaccharide stimulus1 (4.35%)0000010000
GO:0071496cellular response to external stimulus1 (4.35%)0000010000
GO:0031668cellular response to extracellular stimulus1 (4.35%)0000010000
GO:0071396cellular response to lipid1 (4.35%)0000000001
GO:0031669cellular response to nutrient levels1 (4.35%)0000010000
GO:0071470cellular response to osmotic stress1 (4.35%)0000010000
GO:0016036cellular response to phosphate starvation1 (4.35%)0000010000
GO:0009267cellular response to starvation1 (4.35%)0000010000
GO:0033554cellular response to stress1 (4.35%)0000010000
GO:0071329cellular response to sucrose stimulus1 (4.35%)0000010000
GO:0048878chemical homeostasis1 (4.35%)0000010000
GO:0006821chloride transport1 (4.35%)0000000001
GO:0009658chloroplast organization1 (4.35%)0000000001
GO:0031497chromatin assembly1 (4.35%)0000001000
GO:0006333chromatin assembly or disassembly1 (4.35%)0000001000
GO:0006325chromatin organization1 (4.35%)0000001000
GO:0051276chromosome organization1 (4.35%)0000001000
GO:0009736cytokinin-activated signaling pathway1 (4.35%)0000010000
GO:0007010cytoskeleton organization1 (4.35%)0000010000
GO:0016265death1 (4.35%)0000010000
GO:0016311dephosphorylation1 (4.35%)0000000001
GO:0048588developmental cell growth1 (4.35%)0000010000
GO:0048589developmental growth1 (4.35%)0000010000
GO:0060560developmental growth involved in morphogenesis1 (4.35%)0000010000
GO:0009790embryo development1 (4.35%)0000010000
GO:0048598embryonic morphogenesis1 (4.35%)0000010000
GO:0010086embryonic root morphogenesis1 (4.35%)0000010000
GO:0046294formaldehyde catabolic process1 (4.35%)0000000001
GO:0046292formaldehyde metabolic process1 (4.35%)0000000001
GO:0040007growth1 (4.35%)0000010000
GO:0006955immune response1 (4.35%)0000000001
GO:0002376immune system process1 (4.35%)0000000001
GO:0045087innate immune response1 (4.35%)0000000001
GO:0051701interaction with host1 (4.35%)0000000001
GO:0044419interspecies interaction between organisms1 (4.35%)0000000001
GO:0048366leaf development1 (4.35%)0000010000
GO:0010150leaf senescence1 (4.35%)0000010000
GO:0016071mRNA metabolic process1 (4.35%)0000000001
GO:0006397mRNA processing1 (4.35%)0000000001
GO:0061024membrane organization1 (4.35%)0000000001
GO:0048507meristem development1 (4.35%)0000010000
GO:0044003modification by symbiont of host morphology or physiology1 (4.35%)0000000001
GO:0035821modification of morphology or physiology of other organism1 (4.35%)0000000001
GO:0051817modification of morphology or physiology of other organism involved in symbiotic interaction1 (4.35%)0000000001
GO:0052255modulation by organism of defense response of other organism involved in symbiotic interaction1 (4.35%)0000000001
GO:0052552modulation by organism of immune response of other organism involved in symbiotic interaction1 (4.35%)0000000001
GO:0052306modulation by organism of innate immune response in other organism involved in symbiotic interaction1 (4.35%)0000000001
GO:0052031modulation by symbiont of host defense response1 (4.35%)0000000001
GO:0052553modulation by symbiont of host immune response1 (4.35%)0000000001
GO:0052167modulation by symbiont of host innate immune response1 (4.35%)0000000001
GO:0006334nucleosome assembly1 (4.35%)0000001000
GO:0034728nucleosome organization1 (4.35%)0000001000
GO:0010260organ senescence1 (4.35%)0000010000
GO:0016053organic acid biosynthetic process1 (4.35%)0000000001
GO:0006082organic acid metabolic process1 (4.35%)0000000001
GO:1901575organic substance catabolic process1 (4.35%)0000000001
GO:1901566organonitrogen compound biosynthetic process1 (4.35%)0000000001
GO:1901564organonitrogen compound metabolic process1 (4.35%)0000000001
GO:0007231osmosensory signaling pathway1 (4.35%)0000010000
GO:0043436oxoacid metabolic process1 (4.35%)0000000001
GO:0052257pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction1 (4.35%)0000000001
GO:0052033pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1 (4.35%)0000000001
GO:0052308pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction1 (4.35%)0000000001
GO:0052169pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response1 (4.35%)0000000001
GO:0000160phosphorelay signal transduction system1 (4.35%)0000010000
GO:0009668plastid membrane organization1 (4.35%)0000000001
GO:0009657plastid organization1 (4.35%)0000000001
GO:0048868pollen tube development1 (4.35%)0000010000
GO:0009860pollen tube growth1 (4.35%)0000010000
GO:0009875pollen-pistil interaction1 (4.35%)0001000000
GO:0052510positive regulation by organism of defense response of other organism involved in symbiotic interaction1 (4.35%)0000000001
GO:0052555positive regulation by organism of immune response of other organism involved in symbiotic interaction1 (4.35%)0000000001
GO:0052305positive regulation by organism of innate immune response in other organism involved in symbiotic interaction1 (4.35%)0000000001
GO:0052509positive regulation by symbiont of host defense response1 (4.35%)0000000001
GO:0052556positive regulation by symbiont of host immune response1 (4.35%)0000000001
GO:0052166positive regulation by symbiont of host innate immune response1 (4.35%)0000000001
GO:0048518positive regulation of biological process1 (4.35%)0000000001
GO:0031349positive regulation of defense response1 (4.35%)0000000001
GO:0050778positive regulation of immune response1 (4.35%)0000000001
GO:0002684positive regulation of immune system process1 (4.35%)0000000001
GO:0045089positive regulation of innate immune response1 (4.35%)0000000001
GO:0048584positive regulation of response to stimulus1 (4.35%)0000000001
GO:0012501programmed cell death1 (4.35%)0000010000
GO:0006470protein dephosphorylation1 (4.35%)0000000001
GO:0051258protein polymerization1 (4.35%)0000010000
GO:0065004protein-DNA complex assembly1 (4.35%)0000001000
GO:0071824protein-DNA complex subunit organization1 (4.35%)0000001000
GO:0048544recognition of pollen1 (4.35%)0001000000
GO:0032956regulation of actin cytoskeleton organization1 (4.35%)0000010000
GO:0030832regulation of actin filament length1 (4.35%)0000010000
GO:0030833regulation of actin filament polymerization1 (4.35%)0000010000
GO:0032970regulation of actin filament-based process1 (4.35%)0000010000
GO:0008064regulation of actin polymerization or depolymerization1 (4.35%)0000010000
GO:0022603regulation of anatomical structure morphogenesis1 (4.35%)0000010000
GO:0090066regulation of anatomical structure size1 (4.35%)0000010000
GO:0060284regulation of cell development1 (4.35%)0000010000
GO:0045595regulation of cell differentiation1 (4.35%)0000010000
GO:0001558regulation of cell growth1 (4.35%)0000010000
GO:0022604regulation of cell morphogenesis1 (4.35%)0000010000
GO:0010769regulation of cell morphogenesis involved in differentiation1 (4.35%)0000010000
GO:0044087regulation of cellular component biogenesis1 (4.35%)0000010000
GO:0032535regulation of cellular component size1 (4.35%)0000010000
GO:0051493regulation of cytoskeleton organization1 (4.35%)0000010000
GO:0031347regulation of defense response1 (4.35%)0000000001
GO:0048638regulation of developmental growth1 (4.35%)0000010000
GO:0040008regulation of growth1 (4.35%)0000010000
GO:0050776regulation of immune response1 (4.35%)0000000001
GO:0002682regulation of immune system process1 (4.35%)0000000001
GO:0045088regulation of innate immune response1 (4.35%)0000000001
GO:0048509regulation of meristem development1 (4.35%)0000010000
GO:0043900regulation of multi-organism process1 (4.35%)0000010000
GO:2000026regulation of multicellular organismal development1 (4.35%)0000010000
GO:0033043regulation of organelle organization1 (4.35%)0000010000
GO:0080092regulation of pollen tube growth1 (4.35%)0000010000
GO:0048580regulation of post-embryonic development1 (4.35%)0000010000
GO:0043254regulation of protein complex assembly1 (4.35%)0000010000
GO:0032271regulation of protein polymerization1 (4.35%)0000010000
GO:0048583regulation of response to stimulus1 (4.35%)0000000001
GO:0080134regulation of response to stress1 (4.35%)0000000001
GO:0010029regulation of seed germination1 (4.35%)0000010000
GO:1900140regulation of seedling development1 (4.35%)0000010000
GO:0048831regulation of shoot system development1 (4.35%)0000010000
GO:0051510regulation of unidimensional cell growth1 (4.35%)0000010000
GO:0009628response to abiotic stimulus1 (4.35%)0000010000
GO:0046686response to cadmium ion1 (4.35%)0000000001
GO:0009743response to carbohydrate1 (4.35%)0000010000
GO:0009735response to cytokinin1 (4.35%)0000010000
GO:0052173response to defenses of other organism involved in symbiotic interaction1 (4.35%)0000000001
GO:0034285response to disaccharide1 (4.35%)0000010000
GO:0009605response to external stimulus1 (4.35%)0000010000
GO:0009991response to extracellular stimulus1 (4.35%)0000010000
GO:0075136response to host1 (4.35%)0000000001
GO:0052200response to host defenses1 (4.35%)0000000001
GO:0052572response to host immune response1 (4.35%)0000000001
GO:0052564response to immune response of other organism involved in symbiotic interaction1 (4.35%)0000000001
GO:0010038response to metal ion1 (4.35%)0000000001
GO:0031667response to nutrient levels1 (4.35%)0000010000
GO:0006970response to osmotic stress1 (4.35%)0000010000
GO:0042594response to starvation1 (4.35%)0000010000
GO:0009744response to sucrose1 (4.35%)0000010000
GO:0009415response to water1 (4.35%)0000010000
GO:0009414response to water deprivation1 (4.35%)0000010000
GO:0048364root development1 (4.35%)0000010000
GO:0010015root morphogenesis1 (4.35%)0000010000
GO:0022622root system development1 (4.35%)0000010000
GO:0044711single-organism biosynthetic process1 (4.35%)0000000001
GO:0044712single-organism catabolic process1 (4.35%)0000000001
GO:0044802single-organism membrane organization1 (4.35%)0000000001
GO:0044283small molecule biosynthetic process1 (4.35%)0000000001
GO:0044282small molecule catabolic process1 (4.35%)0000000001
GO:0008272sulfate transport1 (4.35%)0000010000
GO:0072348sulfur compound transport1 (4.35%)0000010000
GO:0044403symbiosis, encompassing mutualism through parasitism1 (4.35%)0000000001
GO:0010027thylakoid membrane organization1 (4.35%)0000000001
GO:0009888tissue development1 (4.35%)0000010000
GO:0055085transmembrane transport1 (4.35%)0000000001
GO:0009826unidimensional cell growth1 (4.35%)0000010000

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell16 (69.57%)0000442006
GO:0044464cell part16 (69.57%)0000442006
GO:0005622intracellular13 (56.52%)0000432004
GO:0044424intracellular part13 (56.52%)0000432004
GO:0043229intracellular organelle10 (43.48%)0000232003
GO:0043226organelle10 (43.48%)0000232003
GO:0043231intracellular membrane-bounded organelle9 (39.13%)0000222003
GO:0043227membrane-bounded organelle9 (39.13%)0000222003
GO:0005737cytoplasm8 (34.78%)0000221003
GO:0016020membrane7 (30.43%)0000120004
GO:0071944cell periphery5 (21.74%)0000110003
GO:0005634nucleus5 (21.74%)0000202001
GO:0005886plasma membrane5 (21.74%)0000110003
GO:0044444cytoplasmic part4 (17.39%)0000020002
GO:0044446intracellular organelle part4 (17.39%)0000011002
GO:0044422organelle part4 (17.39%)0000011002
GO:0032991macromolecular complex3 (13.04%)0000011001
GO:0043234protein complex3 (13.04%)0000011001
GO:0009507chloroplast2 (8.70%)0000000002
GO:0043232intracellular non-membrane-bounded organelle2 (8.70%)0000011000
GO:0043228non-membrane-bounded organelle2 (8.70%)0000011000
GO:0009536plastid2 (8.70%)0000000002
GO:0005885Arp2/3 protein complex1 (4.35%)0000010000
GO:1990104DNA bending complex1 (4.35%)0000001000
GO:0044815DNA packaging complex1 (4.35%)0000001000
GO:0005665DNA-directed RNA polymerase II, core complex1 (4.35%)0000000001
GO:0016591DNA-directed RNA polymerase II, holoenzyme1 (4.35%)0000000001
GO:0000418DNA-directed RNA polymerase IV complex1 (4.35%)0000000001
GO:0000419DNA-directed RNA polymerase V complex1 (4.35%)0000000001
GO:0000428DNA-directed RNA polymerase complex1 (4.35%)0000000001
GO:0005794Golgi apparatus1 (4.35%)0000000001
GO:0030880RNA polymerase complex1 (4.35%)0000000001
GO:0015629actin cytoskeleton1 (4.35%)0000010000
GO:0045177apical part of cell1 (4.35%)0000010000
GO:0016324apical plasma membrane1 (4.35%)0000010000
GO:0048046apoplast1 (4.35%)0000000001
GO:1902494catalytic complex1 (4.35%)0000000001
GO:0044434chloroplast part1 (4.35%)0000000001
GO:0009570chloroplast stroma1 (4.35%)0000000001
GO:0000785chromatin1 (4.35%)0000001000
GO:0044427chromosomal part1 (4.35%)0000001000
GO:0005694chromosome1 (4.35%)0000001000
GO:0044430cytoskeletal part1 (4.35%)0000010000
GO:0005856cytoskeleton1 (4.35%)0000010000
GO:0005783endoplasmic reticulum1 (4.35%)0000010000
GO:0005576extracellular region1 (4.35%)0000000001
GO:0070013intracellular organelle lumen1 (4.35%)0000000001
GO:0044425membrane part1 (4.35%)0000010000
GO:0031974membrane-enclosed lumen1 (4.35%)0000000001
GO:0005739mitochondrion1 (4.35%)0000010000
GO:0055029nuclear DNA-directed RNA polymerase complex1 (4.35%)0000000001
GO:0031981nuclear lumen1 (4.35%)0000000001
GO:0044428nuclear part1 (4.35%)0000000001
GO:0005654nucleoplasm1 (4.35%)0000000001
GO:0044451nucleoplasm part1 (4.35%)0000000001
GO:0000786nucleosome1 (4.35%)0000001000
GO:0043233organelle lumen1 (4.35%)0000000001
GO:0044459plasma membrane part1 (4.35%)0000010000
GO:0044435plastid part1 (4.35%)0000000001
GO:0009532plastid stroma1 (4.35%)0000000001
GO:0032993protein-DNA complex1 (4.35%)0000001000
GO:1990234transferase complex1 (4.35%)0000000001