Gene Ontology terms associated with a binding site

Binding site
Motif_573
Name
HY5
Description
Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression
#Associated genes
161
#Associated GO terms
988
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell92 (57.14%)61361321712338
GO:0044464cell part92 (57.14%)61361321712338
GO:0005622intracellular86 (53.42%)61361219710337
GO:0044424intracellular part86 (53.42%)61361219710337
GO:0043229intracellular organelle79 (49.07%)5116121769337
GO:0043226organelle79 (49.07%)5116121769337
GO:0043231intracellular membrane-bounded organelle72 (44.72%)5115111567336
GO:0043227membrane-bounded organelle72 (44.72%)5115111567336
GO:0005737cytoplasm51 (31.68%)5749864224
GO:0044444cytoplasmic part44 (27.33%)4648464224
GO:0044446intracellular organelle part38 (23.60%)2637634223
GO:0044422organelle part38 (23.60%)2637634223
GO:0005634nucleus34 (21.12%)26141123113
GO:0009507chloroplast27 (16.77%)2444332113
GO:0009536plastid27 (16.77%)2444332113
GO:0032991macromolecular complex22 (13.66%)0423414112
GO:0016020membrane22 (13.66%)1225503220
GO:0043234protein complex22 (13.66%)0423414112
GO:0043232intracellular non-membrane-bounded organelle16 (9.94%)0313512001
GO:0043228non-membrane-bounded organelle16 (9.94%)0313512001
GO:0071944cell periphery15 (9.32%)1003523001
GO:0005739mitochondrion15 (9.32%)2322210111
GO:0044434chloroplast part13 (8.07%)2122021111
GO:0044435plastid part13 (8.07%)2122021111
GO:0031975envelope11 (6.83%)1212020111
GO:0044425membrane part11 (6.83%)0212101220
GO:0031967organelle envelope11 (6.83%)1212020111
GO:0000785chromatin9 (5.59%)0202401000
GO:0044427chromosomal part9 (5.59%)0202401000
GO:0005694chromosome9 (5.59%)0202401000
GO:0005886plasma membrane9 (5.59%)1001502000
GO:1990104DNA bending complex8 (4.97%)0201401000
GO:0044815DNA packaging complex8 (4.97%)0201401000
GO:0030054cell junction8 (4.97%)1013111000
GO:0005911cell-cell junction8 (4.97%)1013111000
GO:0000786nucleosome8 (4.97%)0201401000
GO:0009506plasmodesma8 (4.97%)1013111000
GO:0032993protein-DNA complex8 (4.97%)0201401000
GO:0055044symplast8 (4.97%)1013111000
GO:0009941chloroplast envelope7 (4.35%)1111020001
GO:0005829cytosol7 (4.35%)0102021001
GO:0031090organelle membrane7 (4.35%)0103100110
GO:0009526plastid envelope7 (4.35%)1111020001
GO:0009579thylakoid7 (4.35%)0022000111
GO:0005618cell wall6 (3.73%)0002111001
GO:0009570chloroplast stroma6 (3.73%)1011001110
GO:0009534chloroplast thylakoid6 (3.73%)0021000111
GO:0030312external encapsulating structure6 (3.73%)0002111001
GO:0044428nuclear part6 (3.73%)0201101001
GO:0031984organelle subcompartment6 (3.73%)0021000111
GO:0009532plastid stroma6 (3.73%)1011001110
GO:0031976plastid thylakoid6 (3.73%)0021000111
GO:0005773vacuole6 (3.73%)1002111000
GO:0009535chloroplast thylakoid membrane5 (3.11%)0021000110
GO:0044430cytoskeletal part5 (3.11%)0011011001
GO:0005856cytoskeleton5 (3.11%)0011011001
GO:0016021integral to membrane5 (3.11%)0101100110
GO:0031224intrinsic to membrane5 (3.11%)0101100110
GO:0015630microtubule cytoskeleton5 (3.11%)0011011001
GO:0034357photosynthetic membrane5 (3.11%)0021000110
GO:0055035plastid thylakoid membrane5 (3.11%)0021000110
GO:0042651thylakoid membrane5 (3.11%)0021000110
GO:0044436thylakoid part5 (3.11%)0021000110
GO:0009517PSII associated light-harvesting complex II4 (2.48%)0011000110
GO:0048046apoplast4 (2.48%)0002001001
GO:0009533chloroplast stromal thylakoid4 (2.48%)0011000110
GO:0005576extracellular region4 (2.48%)0002001001
GO:0070013intracellular organelle lumen4 (2.48%)0102100000
GO:0005871kinesin complex4 (2.48%)0011001001
GO:0030076light-harvesting complex4 (2.48%)0011000110
GO:0031974membrane-enclosed lumen4 (2.48%)0102100000
GO:0005875microtubule associated complex4 (2.48%)0011001001
GO:0005740mitochondrial envelope4 (2.48%)0101000110
GO:0031966mitochondrial membrane4 (2.48%)0101000110
GO:0044455mitochondrial membrane part4 (2.48%)0101000110
GO:0044429mitochondrial part4 (2.48%)0101000110
GO:0043233organelle lumen4 (2.48%)0102100000
GO:0009521photosystem4 (2.48%)0011000110
GO:0009523photosystem II4 (2.48%)0011000110
GO:0009783photosystem II antenna complex4 (2.48%)0011000110
GO:0009505plant-type cell wall4 (2.48%)0001111000
GO:0010287plastoglobule4 (2.48%)0011000110
GO:0009503thylakoid light-harvesting complex4 (2.48%)0011000110
GO:0005794Golgi apparatus3 (1.86%)0001110000
GO:0031519PcG protein complex3 (1.86%)0100001001
GO:0005783endoplasmic reticulum3 (1.86%)0002001000
GO:0032592integral to mitochondrial membrane3 (1.86%)0001000110
GO:0031307integral to mitochondrial outer membrane3 (1.86%)0001000110
GO:0031301integral to organelle membrane3 (1.86%)0001000110
GO:0031306intrinsic to mitochondrial outer membrane3 (1.86%)0001000110
GO:0031300intrinsic to organelle membrane3 (1.86%)0001000110
GO:0005741mitochondrial outer membrane3 (1.86%)0001000110
GO:0031981nuclear lumen3 (1.86%)0101100000
GO:0005730nucleolus3 (1.86%)0101100000
GO:0031968organelle outer membrane3 (1.86%)0001000110
GO:0019867outer membrane3 (1.86%)0001000110
GO:0005774vacuolar membrane3 (1.86%)0002100000
GO:0044437vacuolar part3 (1.86%)0002100000
GO:1902494catalytic complex2 (1.24%)0100001000
GO:0019005SCF ubiquitin ligase complex1 (0.62%)0000001000
GO:0045177apical part of cell1 (0.62%)0000001000
GO:0016324apical plasma membrane1 (0.62%)0000001000
GO:0005938cell cortex1 (0.62%)0000010000
GO:0044448cell cortex part1 (0.62%)0000010000
GO:0005677chromatin silencing complex1 (0.62%)0000001000
GO:0030863cortical cytoskeleton1 (0.62%)0000010000
GO:0055028cortical microtubule1 (0.62%)0000010000
GO:0030981cortical microtubule cytoskeleton1 (0.62%)0000010000
GO:0031461cullin-RING ubiquitin ligase complex1 (0.62%)0000001000
GO:0005881cytoplasmic microtubule1 (0.62%)0000010000
GO:0005788endoplasmic reticulum lumen1 (0.62%)0001000000
GO:0044432endoplasmic reticulum part1 (0.62%)0001000000
GO:0005768endosome1 (0.62%)0000100000
GO:0045283fumarate reductase complex1 (0.62%)0100000000
GO:0005828kinetochore microtubule1 (0.62%)0000010000
GO:0042579microbody1 (0.62%)0001000000
GO:0005874microtubule1 (0.62%)0000010000
GO:0005743mitochondrial inner membrane1 (0.62%)0100000000
GO:0005746mitochondrial respiratory chain1 (0.62%)0100000000
GO:0005749mitochondrial respiratory chain complex II1 (0.62%)0100000000
GO:0019866organelle inner membrane1 (0.62%)0100000000
GO:1990204oxidoreductase complex1 (0.62%)0100000000
GO:0005777peroxisome1 (0.62%)0001000000
GO:0009524phragmoplast1 (0.62%)0000010000
GO:0044459plasma membrane part1 (0.62%)0000001000
GO:0009574preprophase band1 (0.62%)0000010000
GO:0070469respiratory chain1 (0.62%)0100000000
GO:0045273respiratory chain complex II1 (0.62%)0100000000
GO:0005819spindle1 (0.62%)0000010000
GO:0005876spindle microtubule1 (0.62%)0000010000
GO:0045281succinate dehydrogenase complex1 (0.62%)0100000000
GO:0045257succinate dehydrogenase complex (ubiquinone)1 (0.62%)0100000000
GO:0005802trans-Golgi network1 (0.62%)0000100000
GO:0000151ubiquitin ligase complex1 (0.62%)0000001000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process93 (57.76%)21361530411426
GO:0008152metabolic process88 (54.66%)1126142968426
GO:0044699single-organism process82 (50.93%)3136626811324
GO:0044237cellular metabolic process80 (49.69%)1125132837425
GO:0071704organic substance metabolic process74 (45.96%)1114122647315
GO:0044238primary metabolic process71 (44.10%)1123122347315
GO:0043170macromolecule metabolic process61 (37.89%)193112035315
GO:0006807nitrogen compound metabolic process60 (37.27%)110472236313
GO:0050896response to stimulus60 (37.27%)26681457327
GO:0044260cellular macromolecule metabolic process59 (36.65%)193102034315
GO:0044763single-organism cellular process59 (36.65%)213561927113
GO:0034641cellular nitrogen compound metabolic process58 (36.02%)110452236313
GO:0006725cellular aromatic compound metabolic process55 (34.16%)110461935313
GO:1901360organic cyclic compound metabolic process55 (34.16%)110461935313
GO:0065007biological regulation54 (33.54%)27371439315
GO:0046483heterocycle metabolic process53 (32.92%)110441935313
GO:0006139nucleobase-containing compound metabolic process50 (31.06%)19341934313
GO:0090304nucleic acid metabolic process49 (30.43%)18341934313
GO:0050789regulation of biological process48 (29.81%)25361437314
GO:0009058biosynthetic process43 (26.71%)14331834313
GO:0044249cellular biosynthetic process43 (26.71%)14331834313
GO:1901576organic substance biosynthetic process43 (26.71%)14331834313
GO:0044271cellular nitrogen compound biosynthetic process41 (25.47%)14331734312
GO:0050794regulation of cellular process41 (25.47%)04251436313
GO:0019222regulation of metabolic process39 (24.22%)04251434313
GO:0019438aromatic compound biosynthetic process38 (23.60%)14331434312
GO:0018130heterocycle biosynthetic process38 (23.60%)14331434312
GO:1901362organic cyclic compound biosynthetic process38 (23.60%)14331434312
GO:0016070RNA metabolic process37 (22.98%)14231433313
GO:0010467gene expression37 (22.98%)14231433313
GO:0031323regulation of cellular metabolic process37 (22.98%)03251433313
GO:0051171regulation of nitrogen compound metabolic process37 (22.98%)03251433313
GO:0034645cellular macromolecule biosynthetic process36 (22.36%)13231433313
GO:0009059macromolecule biosynthetic process36 (22.36%)13231433313
GO:0010468regulation of gene expression36 (22.36%)04231433313
GO:0060255regulation of macromolecule metabolic process36 (22.36%)04231433313
GO:0032774RNA biosynthetic process35 (21.74%)13231433312
GO:0034654nucleobase-containing compound biosynthetic process35 (21.74%)13231433312
GO:0051252regulation of RNA metabolic process35 (21.74%)03231433313
GO:0019219regulation of nucleobase-containing compound metabolic process35 (21.74%)03231433313
GO:0080090regulation of primary metabolic process35 (21.74%)03231433313
GO:0006351transcription, DNA-templated35 (21.74%)13231433312
GO:2001141regulation of RNA biosynthetic process34 (21.12%)03231433312
GO:0009889regulation of biosynthetic process34 (21.12%)03231433312
GO:0031326regulation of cellular biosynthetic process34 (21.12%)03231433312
GO:2000112regulation of cellular macromolecule biosynthetic process34 (21.12%)03231433312
GO:0010556regulation of macromolecule biosynthetic process34 (21.12%)03231433312
GO:0006355regulation of transcription, DNA-dependent34 (21.12%)03231433312
GO:0009628response to abiotic stimulus31 (19.25%)1235833213
GO:0006950response to stress30 (18.63%)1326923103
GO:0032501multicellular organismal process29 (18.01%)14121014321
GO:0044707single-multicellular organism process28 (17.39%)14121013321
GO:0032502developmental process25 (15.53%)1202925211
GO:0044710single-organism metabolic process25 (15.53%)1633732000
GO:0044767single-organism developmental process24 (14.91%)1202915211
GO:0048856anatomical structure development23 (14.29%)1202924210
GO:0051716cellular response to stimulus23 (14.29%)0532810112
GO:0042221response to chemical23 (14.29%)1204714103
GO:0016043cellular component organization20 (12.42%)1312723001
GO:0071840cellular component organization or biogenesis20 (12.42%)1312723001
GO:0009719response to endogenous stimulus20 (12.42%)1202713103
GO:0009725response to hormone20 (12.42%)1202713103
GO:0010033response to organic substance20 (12.42%)1202713103
GO:0007275multicellular organismal development19 (11.80%)1202713210
GO:0048731system development19 (11.80%)1202713210
GO:0048519negative regulation of biological process18 (11.18%)0312513111
GO:0006996organelle organization18 (11.18%)1312721001
GO:0009416response to light stimulus16 (9.94%)0121323112
GO:1901700response to oxygen-containing compound16 (9.94%)1103612101
GO:0009314response to radiation16 (9.94%)0121323112
GO:0003006developmental process involved in reproduction15 (9.32%)0102514110
GO:0000003reproduction15 (9.32%)0102514110
GO:0022414reproductive process15 (9.32%)0102514110
GO:0009266response to temperature stimulus15 (9.32%)1102711101
GO:0007154cell communication14 (8.70%)0312500111
GO:0044085cellular component biogenesis14 (8.70%)1211521001
GO:0006091generation of precursor metabolites and energy14 (8.70%)1221311111
GO:0010629negative regulation of gene expression14 (8.70%)0210512111
GO:0010605negative regulation of macromolecule metabolic process14 (8.70%)0210512111
GO:0009892negative regulation of metabolic process14 (8.70%)0210512111
GO:0048518positive regulation of biological process14 (8.70%)0112621001
GO:0009791post-embryonic development14 (8.70%)0102513110
GO:0048608reproductive structure development14 (8.70%)0102513110
GO:0061458reproductive system development14 (8.70%)0102513110
GO:0007165signal transduction14 (8.70%)0312500111
GO:0023052signaling14 (8.70%)0312500111
GO:0044700single organism signaling14 (8.70%)0312500111
GO:0006259DNA metabolic process13 (8.07%)0411601000
GO:0022607cellular component assembly13 (8.07%)0211521001
GO:0034622cellular macromolecular complex assembly13 (8.07%)0211521001
GO:0007623circadian rhythm13 (8.07%)0210511111
GO:0065003macromolecular complex assembly13 (8.07%)0211521001
GO:0043933macromolecular complex subunit organization13 (8.07%)0211521001
GO:0051704multi-organism process13 (8.07%)1103323000
GO:0006461protein complex assembly13 (8.07%)0211521001
GO:0070271protein complex biogenesis13 (8.07%)0211521001
GO:0071822protein complex subunit organization13 (8.07%)0211521001
GO:0048511rhythmic process13 (8.07%)0210511111
GO:0055114oxidation-reduction process12 (7.45%)1121520000
GO:0000160phosphorelay signal transduction system12 (7.45%)0310500111
GO:0051254positive regulation of RNA metabolic process12 (7.45%)0110621001
GO:0009891positive regulation of biosynthetic process12 (7.45%)0110621001
GO:0031328positive regulation of cellular biosynthetic process12 (7.45%)0110621001
GO:0031325positive regulation of cellular metabolic process12 (7.45%)0110621001
GO:0048522positive regulation of cellular process12 (7.45%)0110621001
GO:0010628positive regulation of gene expression12 (7.45%)0110621001
GO:0010557positive regulation of macromolecule biosynthetic process12 (7.45%)0110621001
GO:0010604positive regulation of macromolecule metabolic process12 (7.45%)0110621001
GO:0009893positive regulation of metabolic process12 (7.45%)0110621001
GO:0051173positive regulation of nitrogen compound metabolic process12 (7.45%)0110621001
GO:0045935positive regulation of nucleobase-containing compound metabolic process12 (7.45%)0110621001
GO:0045893positive regulation of transcription, DNA-dependent12 (7.45%)0110621001
GO:0033993response to lipid12 (7.45%)1102412100
GO:0019538protein metabolic process11 (6.83%)0106101002
GO:0097305response to alcohol11 (6.83%)1102411100
GO:0009056catabolic process10 (6.21%)1103202001
GO:0006325chromatin organization10 (6.21%)0302401000
GO:0051276chromosome organization10 (6.21%)0302401000
GO:0006952defense response10 (6.21%)1014012001
GO:0015979photosynthesis10 (6.21%)1031110111
GO:0050793regulation of developmental process10 (6.21%)1102302100
GO:0051239regulation of multicellular organismal process10 (6.21%)1102302100
GO:0009737response to abscisic acid10 (6.21%)0102411100
GO:0009607response to biotic stimulus10 (6.21%)1003222000
GO:0010035response to inorganic substance10 (6.21%)0104212000
GO:0051707response to other organism10 (6.21%)1003222000
GO:0044702single organism reproductive process10 (6.21%)0002303110
GO:0044267cellular protein metabolic process9 (5.59%)0105100002
GO:0006333chromatin assembly or disassembly9 (5.59%)0202401000
GO:0010031circumnutation9 (5.59%)0210300111
GO:0050879multicellular organismal movement9 (5.59%)0210300111
GO:0048513organ development9 (5.59%)1202201100
GO:0019684photosynthesis, light reaction9 (5.59%)1021110111
GO:2000026regulation of multicellular organismal development9 (5.59%)1102301100
GO:0009409response to cold9 (5.59%)1002311001
GO:0009753response to jasmonic acid9 (5.59%)0002411001
GO:0071103DNA conformation change8 (4.97%)0201401000
GO:0006323DNA packaging8 (4.97%)0201401000
GO:0031497chromatin assembly8 (4.97%)0201401000
GO:0006334nucleosome assembly8 (4.97%)0201401000
GO:0034728nucleosome organization8 (4.97%)0201401000
GO:1901575organic substance catabolic process8 (4.97%)1102201001
GO:0065004protein-DNA complex assembly8 (4.97%)0201401000
GO:0071824protein-DNA complex subunit organization8 (4.97%)0201401000
GO:0009733response to auxin8 (4.97%)0100312001
GO:0009637response to blue light8 (4.97%)0021110111
GO:0010218response to far red light8 (4.97%)0021110111
GO:0009408response to heat8 (4.97%)0102400100
GO:0010114response to red light8 (4.97%)0021110111
GO:0009639response to red or far red light8 (4.97%)0021110111
GO:0044281small molecule metabolic process8 (4.97%)1103201000
GO:0005975carbohydrate metabolic process7 (4.35%)1101201001
GO:0033554cellular response to stress7 (4.35%)0212200000
GO:0009658chloroplast organization7 (4.35%)1010310001
GO:0010154fruit development7 (4.35%)0000302110
GO:0010286heat acclimation7 (4.35%)0002400100
GO:0006629lipid metabolic process7 (4.35%)1101112000
GO:0051179localization7 (4.35%)3100021000
GO:0048523negative regulation of cellular process7 (4.35%)0100213000
GO:1901566organonitrogen compound biosynthetic process7 (4.35%)1110301000
GO:1901564organonitrogen compound metabolic process7 (4.35%)1110301000
GO:0009657plastid organization7 (4.35%)1010310001
GO:0065008regulation of biological quality7 (4.35%)0201003001
GO:0009723response to ethylene7 (4.35%)0100411000
GO:0048316seed development7 (4.35%)0000302110
GO:0009653anatomical structure morphogenesis6 (3.73%)0100212000
GO:0019752carboxylic acid metabolic process6 (3.73%)1103001000
GO:0006464cellular protein modification process6 (3.73%)0103100001
GO:0098542defense response to other organism6 (3.73%)1003011000
GO:0009553embryo sac development6 (3.73%)0002200110
GO:0048229gametophyte development6 (3.73%)0002200110
GO:0043412macromolecule modification6 (3.73%)0103100001
GO:0032787monocarboxylic acid metabolic process6 (3.73%)1103001000
GO:0044092negative regulation of molecular function6 (3.73%)0100212000
GO:0006082organic acid metabolic process6 (3.73%)1103001000
GO:0043436oxoacid metabolic process6 (3.73%)1103001000
GO:0036211protein modification process6 (3.73%)0103100001
GO:0031347regulation of defense response6 (3.73%)0013001001
GO:0065009regulation of molecular function6 (3.73%)0100212000
GO:0048583regulation of response to stimulus6 (3.73%)0013001001
GO:0080134regulation of response to stress6 (3.73%)0013001001
GO:0046686response to cadmium ion6 (3.73%)0001212000
GO:0010038response to metal ion6 (3.73%)0001212000
GO:0044712single-organism catabolic process6 (3.73%)1101201000
GO:0009888tissue development6 (3.73%)1100201100
GO:0006281DNA repair5 (3.11%)0210200000
GO:0016052carbohydrate catabolic process5 (3.11%)1100201000
GO:0044248cellular catabolic process5 (3.11%)0003001001
GO:0044255cellular lipid metabolic process5 (3.11%)1101101000
GO:0043623cellular protein complex assembly5 (3.11%)0010120001
GO:0006974cellular response to DNA damage stimulus5 (3.11%)0210200000
GO:0070887cellular response to chemical stimulus5 (3.11%)0102200000
GO:0071495cellular response to endogenous stimulus5 (3.11%)0102200000
GO:0032870cellular response to hormone stimulus5 (3.11%)0102200000
GO:0071310cellular response to organic substance5 (3.11%)0102200000
GO:0048878chemical homeostasis5 (3.11%)0101002001
GO:0009790embryo development5 (3.11%)0000300110
GO:0009793embryo development ending in seed dormancy5 (3.11%)0000300110
GO:0051234establishment of localization5 (3.11%)2000021000
GO:0040007growth5 (3.11%)1002002000
GO:0042592homeostatic process5 (3.11%)0101002001
GO:0009755hormone-mediated signaling pathway5 (3.11%)0102200000
GO:0048507meristem development5 (3.11%)1100200100
GO:0007017microtubule-based process5 (3.11%)0011011001
GO:0051253negative regulation of RNA metabolic process5 (3.11%)0000212000
GO:0009890negative regulation of biosynthetic process5 (3.11%)0000212000
GO:0031327negative regulation of cellular biosynthetic process5 (3.11%)0000212000
GO:2000113negative regulation of cellular macromolecule biosynthetic process5 (3.11%)0000212000
GO:0031324negative regulation of cellular metabolic process5 (3.11%)0000212000
GO:0010558negative regulation of macromolecule biosynthetic process5 (3.11%)0000212000
GO:0051172negative regulation of nitrogen compound metabolic process5 (3.11%)0000212000
GO:0045934negative regulation of nucleobase-containing compound metabolic process5 (3.11%)0000212000
GO:0045892negative regulation of transcription, DNA-dependent5 (3.11%)0000212000
GO:0006796phosphate-containing compound metabolic process5 (3.11%)1101001001
GO:0006793phosphorus metabolic process5 (3.11%)1101001001
GO:0046148pigment biosynthetic process5 (3.11%)1110101000
GO:0042440pigment metabolic process5 (3.11%)1110101000
GO:0040008regulation of growth5 (3.11%)1002002000
GO:0048509regulation of meristem development5 (3.11%)1100200100
GO:0009739response to gibberellin stimulus5 (3.11%)0000212000
GO:0014070response to organic cyclic compound5 (3.11%)1000211000
GO:0006970response to osmotic stress5 (3.11%)0001211000
GO:0009651response to salt stress5 (3.11%)0001211000
GO:0048367shoot system development5 (3.11%)0202100000
GO:0044711single-organism biosynthetic process5 (3.11%)1110101000
GO:0044723single-organism carbohydrate metabolic process5 (3.11%)1100201000
GO:0010228vegetative to reproductive phase transition of meristem5 (3.11%)0100211000
GO:0006352DNA-dependent transcription, initiation4 (2.48%)0010110001
GO:0016049cell growth4 (2.48%)0002002000
GO:0044262cellular carbohydrate metabolic process4 (2.48%)0001200001
GO:0006928cellular component movement4 (2.48%)0011001001
GO:0071214cellular response to abiotic stimulus4 (2.48%)0010110001
GO:0071483cellular response to blue light4 (2.48%)0010110001
GO:0071482cellular response to light stimulus4 (2.48%)0010110001
GO:0071478cellular response to radiation4 (2.48%)0010110001
GO:0015995chlorophyll biosynthetic process4 (2.48%)1110001000
GO:0015994chlorophyll metabolic process4 (2.48%)1110001000
GO:0051188cofactor biosynthetic process4 (2.48%)1110001000
GO:0051186cofactor metabolic process4 (2.48%)1110001000
GO:0042742defense response to bacterium4 (2.48%)1002001000
GO:0048589developmental growth4 (2.48%)1002001000
GO:1990066energy quenching4 (2.48%)0011000110
GO:0008299isoprenoid biosynthetic process4 (2.48%)1100101000
GO:0006720isoprenoid metabolic process4 (2.48%)1100101000
GO:0008610lipid biosynthetic process4 (2.48%)1100101000
GO:0048571long-day photoperiodism4 (2.48%)0000211000
GO:0048574long-day photoperiodism, flowering4 (2.48%)0000211000
GO:0009561megagametogenesis4 (2.48%)0000200110
GO:0007018microtubule-based movement4 (2.48%)0011001001
GO:0042754negative regulation of circadian rhythm4 (2.48%)0000211000
GO:0043433negative regulation of sequence-specific DNA binding transcription factor activity4 (2.48%)0000211000
GO:0010196nonphotochemical quenching4 (2.48%)0011000110
GO:1901615organic hydroxy compound metabolic process4 (2.48%)0002200000
GO:0009648photoperiodism4 (2.48%)0000211000
GO:0048573photoperiodism, flowering4 (2.48%)0000211000
GO:0009765photosynthesis, light harvesting4 (2.48%)0011000110
GO:0010207photosystem II assembly4 (2.48%)0010110001
GO:0048827phyllome development4 (2.48%)0202000000
GO:0006779porphyrin-containing compound biosynthetic process4 (2.48%)1110001000
GO:0006778porphyrin-containing compound metabolic process4 (2.48%)1110001000
GO:0051098regulation of binding4 (2.48%)0000211000
GO:0042752regulation of circadian rhythm4 (2.48%)0000211000
GO:0048580regulation of post-embryonic development4 (2.48%)0002101000
GO:0043393regulation of protein binding4 (2.48%)0000211000
GO:0043496regulation of protein homodimerization activity4 (2.48%)0000211000
GO:2000241regulation of reproductive process4 (2.48%)0002002000
GO:0051090regulation of sequence-specific DNA binding transcription factor activity4 (2.48%)0000211000
GO:0009617response to bacterium4 (2.48%)1002001000
GO:0009620response to fungus4 (2.48%)0001012000
GO:0080167response to karrikin4 (2.48%)0010110001
GO:1901698response to nitrogen compound4 (2.48%)0000211000
GO:0010243response to organonitrogen compound4 (2.48%)0000211000
GO:0009751response to salicylic acid4 (2.48%)0000211000
GO:0009415response to water4 (2.48%)0103000000
GO:0009414response to water deprivation4 (2.48%)0103000000
GO:0044765single-organism transport4 (2.48%)1000021000
GO:0033014tetrapyrrole biosynthetic process4 (2.48%)1110001000
GO:0033013tetrapyrrole metabolic process4 (2.48%)1110001000
GO:0006810transport4 (2.48%)1000021000
GO:0009309amine biosynthetic process3 (1.86%)0000300000
GO:0009308amine metabolic process3 (1.86%)0000300000
GO:0048646anatomical structure formation involved in morphogenesis3 (1.86%)0000210000
GO:0010252auxin homeostasis3 (1.86%)0100001001
GO:1901135carbohydrate derivative metabolic process3 (1.86%)1100001000
GO:0008219cell death3 (1.86%)0000201000
GO:0051301cell division3 (1.86%)0002010000
GO:0006081cellular aldehyde metabolic process3 (1.86%)1100001000
GO:0044106cellular amine metabolic process3 (1.86%)0000300000
GO:0042401cellular biogenic amine biosynthetic process3 (1.86%)0000300000
GO:0006576cellular biogenic amine metabolic process3 (1.86%)0000300000
GO:0051641cellular localization3 (1.86%)2100000000
GO:0044270cellular nitrogen compound catabolic process3 (1.86%)0001001001
GO:0045333cellular respiration3 (1.86%)0100200000
GO:0071369cellular response to ethylene stimulus3 (1.86%)0100200000
GO:0016265death3 (1.86%)0000201000
GO:0050832defense response to fungus3 (1.86%)0001011000
GO:0015980energy derivation by oxidation of organic compounds3 (1.86%)0100200000
GO:0009873ethylene mediated signaling pathway3 (1.86%)0100200000
GO:0006007glucose catabolic process3 (1.86%)1100001000
GO:0006006glucose metabolic process3 (1.86%)1100001000
GO:0019682glyceraldehyde-3-phosphate metabolic process3 (1.86%)1100001000
GO:0019320hexose catabolic process3 (1.86%)1100001000
GO:0019318hexose metabolic process3 (1.86%)1100001000
GO:0009240isopentenyl diphosphate biosynthetic process3 (1.86%)1100001000
GO:0019288isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3 (1.86%)1100001000
GO:0046490isopentenyl diphosphate metabolic process3 (1.86%)1100001000
GO:0046365monosaccharide catabolic process3 (1.86%)1100001000
GO:0005996monosaccharide metabolic process3 (1.86%)1100001000
GO:0044706multi-multicellular organism process3 (1.86%)0002001000
GO:0044703multi-organism reproductive process3 (1.86%)0002001000
GO:0051093negative regulation of developmental process3 (1.86%)0102000000
GO:0090407organophosphate biosynthetic process3 (1.86%)1100001000
GO:0019637organophosphate metabolic process3 (1.86%)1100001000
GO:0008654phospholipid biosynthetic process3 (1.86%)1100001000
GO:0006644phospholipid metabolic process3 (1.86%)1100001000
GO:0048868pollen tube development3 (1.86%)0002001000
GO:0009856pollination3 (1.86%)0002001000
GO:0006596polyamine biosynthetic process3 (1.86%)0000300000
GO:0006595polyamine metabolic process3 (1.86%)0000300000
GO:0032446protein modification by small protein conjugation3 (1.86%)0002100000
GO:0070647protein modification by small protein conjugation or removal3 (1.86%)0002100000
GO:0006508proteolysis3 (1.86%)0002001000
GO:0006090pyruvate metabolic process3 (1.86%)1100001000
GO:0040034regulation of development, heterochronic3 (1.86%)0000200100
GO:0043900regulation of multi-organism process3 (1.86%)0002001000
GO:0048831regulation of shoot system development3 (1.86%)0002100000
GO:0048506regulation of timing of meristematic phase transition3 (1.86%)0000200100
GO:0048510regulation of timing of transition from vegetative to reproductive phase3 (1.86%)0000200100
GO:0009735response to cytokinin3 (1.86%)0000200001
GO:0006979response to oxidative stress3 (1.86%)0001010001
GO:0044724single-organism carbohydrate catabolic process3 (1.86%)1100001000
GO:0044282small molecule catabolic process3 (1.86%)0001200000
GO:0008295spermidine biosynthetic process3 (1.86%)0000300000
GO:0008216spermidine metabolic process3 (1.86%)0000300000
GO:0006597spermine biosynthetic process3 (1.86%)0000300000
GO:0008215spermine metabolic process3 (1.86%)0000300000
GO:0016114terpenoid biosynthetic process3 (1.86%)0100101000
GO:0006721terpenoid metabolic process3 (1.86%)0100101000
GO:0009294DNA mediated transformation2 (1.24%)0100100000
GO:0006396RNA processing2 (1.24%)1000000001
GO:0009738abscisic acid-activated signaling pathway2 (1.24%)0002000000
GO:0002253activation of immune response2 (1.24%)0002000000
GO:0002218activation of innate immune response2 (1.24%)0002000000
GO:0007568aging2 (1.24%)0000001001
GO:0046164alcohol catabolic process2 (1.24%)0000200000
GO:0006066alcohol metabolic process2 (1.24%)0000200000
GO:0009061anaerobic respiration2 (1.24%)0000200000
GO:0042537benzene-containing compound metabolic process2 (1.24%)0002000000
GO:0048440carpel development2 (1.24%)0002000000
GO:0006812cation transport2 (1.24%)0000020000
GO:0048468cell development2 (1.24%)0100001000
GO:0030154cell differentiation2 (1.24%)0100001000
GO:0043603cellular amide metabolic process2 (1.24%)0001001000
GO:0044275cellular carbohydrate catabolic process2 (1.24%)0000200000
GO:0048869cellular developmental process2 (1.24%)0100001000
GO:0006073cellular glucan metabolic process2 (1.24%)0001000001
GO:0042180cellular ketone metabolic process2 (1.24%)0002000000
GO:0044265cellular macromolecule catabolic process2 (1.24%)0001000001
GO:0044264cellular polysaccharide metabolic process2 (1.24%)0001000001
GO:0071215cellular response to abscisic acid stimulus2 (1.24%)0002000000
GO:0097306cellular response to alcohol2 (1.24%)0002000000
GO:0071496cellular response to external stimulus2 (1.24%)0002000000
GO:0031668cellular response to extracellular stimulus2 (1.24%)0002000000
GO:0071395cellular response to jasmonic acid stimulus2 (1.24%)0002000000
GO:0071396cellular response to lipid2 (1.24%)0002000000
GO:0031669cellular response to nutrient levels2 (1.24%)0002000000
GO:1901701cellular response to oxygen-containing compound2 (1.24%)0002000000
GO:0016036cellular response to phosphate starvation2 (1.24%)0002000000
GO:0009267cellular response to starvation2 (1.24%)0002000000
GO:0006935chemotaxis2 (1.24%)0002000000
GO:0009814defense response, incompatible interaction2 (1.24%)0002000000
GO:0009593detection of chemical stimulus2 (1.24%)0002000000
GO:0010247detection of phosphate ion2 (1.24%)0002000000
GO:0051606detection of stimulus2 (1.24%)0002000000
GO:0051649establishment of localization in cell2 (1.24%)2000000000
GO:0048437floral organ development2 (1.24%)0002000000
GO:0048438floral whorl development2 (1.24%)0002000000
GO:0009908flower development2 (1.24%)0002000000
GO:0071514genetic imprinting2 (1.24%)0100001000
GO:0009292genetic transfer2 (1.24%)0100100000
GO:0044042glucan metabolic process2 (1.24%)0001000001
GO:0006096glycolysis2 (1.24%)0100001000
GO:0048467gynoecium development2 (1.24%)0002000000
GO:0002252immune effector process2 (1.24%)0002000000
GO:0006955immune response2 (1.24%)0002000000
GO:0002376immune system process2 (1.24%)0002000000
GO:0009682induced systemic resistance2 (1.24%)0002000000
GO:0009864induced systemic resistance, jasmonic acid mediated signaling pathway2 (1.24%)0002000000
GO:0045087innate immune response2 (1.24%)0002000000
GO:0019310inositol catabolic process2 (1.24%)0000200000
GO:0006020inositol metabolic process2 (1.24%)0000200000
GO:0050801ion homeostasis2 (1.24%)0001001000
GO:0006811ion transport2 (1.24%)0000020000
GO:0009867jasmonic acid mediated signaling pathway2 (1.24%)0002000000
GO:0048366leaf development2 (1.24%)0200000000
GO:0040011locomotion2 (1.24%)0002000000
GO:0009057macromolecule catabolic process2 (1.24%)0001000001
GO:0033036macromolecule localization2 (1.24%)1100000000
GO:0030001metal ion transport2 (1.24%)0000020000
GO:0044764multi-organism cellular process2 (1.24%)0100100000
GO:0032504multicellular organism reproduction2 (1.24%)0000101000
GO:0048609multicellular organismal reproductive process2 (1.24%)0000101000
GO:0034660ncRNA metabolic process2 (1.24%)1100000000
GO:0031348negative regulation of defense response2 (1.24%)0002000000
GO:0009910negative regulation of flower development2 (1.24%)0002000000
GO:0050777negative regulation of immune response2 (1.24%)0002000000
GO:0002683negative regulation of immune system process2 (1.24%)0002000000
GO:0045824negative regulation of innate immune response2 (1.24%)0002000000
GO:0043901negative regulation of multi-organism process2 (1.24%)0002000000
GO:0051241negative regulation of multicellular organismal process2 (1.24%)0002000000
GO:0048581negative regulation of post-embryonic development2 (1.24%)0002000000
GO:2000242negative regulation of reproductive process2 (1.24%)0002000000
GO:0002832negative regulation of response to biotic stimulus2 (1.24%)0002000000
GO:0048585negative regulation of response to stimulus2 (1.24%)0002000000
GO:0010113negative regulation of systemic acquired resistance2 (1.24%)0002000000
GO:0042128nitrate assimilation2 (1.24%)0002000000
GO:0042126nitrate metabolic process2 (1.24%)0002000000
GO:0071941nitrogen cycle metabolic process2 (1.24%)0002000000
GO:1901616organic hydroxy compound catabolic process2 (1.24%)0000200000
GO:0048481ovule development2 (1.24%)0002000000
GO:0016310phosphorylation2 (1.24%)0001000001
GO:0035670plant-type ovary development2 (1.24%)0002000000
GO:0010183pollen tube guidance2 (1.24%)0002000000
GO:0046174polyol catabolic process2 (1.24%)0000200000
GO:0019751polyol metabolic process2 (1.24%)0000200000
GO:0005976polysaccharide metabolic process2 (1.24%)0001000001
GO:0050918positive chemotaxis2 (1.24%)0002000000
GO:0031349positive regulation of defense response2 (1.24%)0002000000
GO:0050778positive regulation of immune response2 (1.24%)0002000000
GO:0002684positive regulation of immune system process2 (1.24%)0002000000
GO:0045089positive regulation of innate immune response2 (1.24%)0002000000
GO:0048584positive regulation of response to stimulus2 (1.24%)0002000000
GO:0048569post-embryonic organ development2 (1.24%)0002000000
GO:0008104protein localization2 (1.24%)1100000000
GO:0006468protein phosphorylation2 (1.24%)0001000001
GO:0016925protein sumoylation2 (1.24%)0002000000
GO:2001057reactive nitrogen species metabolic process2 (1.24%)0002000000
GO:0009787regulation of abscisic acid-activated signaling pathway2 (1.24%)0002000000
GO:0010646regulation of cell communication2 (1.24%)0002000000
GO:0045595regulation of cell differentiation2 (1.24%)0100001000
GO:0001558regulation of cell growth2 (1.24%)0000002000
GO:0051128regulation of cellular component organization2 (1.24%)0000002000
GO:0010565regulation of cellular ketone metabolic process2 (1.24%)0002000000
GO:0048638regulation of developmental growth2 (1.24%)1000001000
GO:0009909regulation of flower development2 (1.24%)0002000000
GO:0006349regulation of gene expression by genetic imprinting2 (1.24%)0100001000
GO:0040029regulation of gene expression, epigenetic2 (1.24%)0100001000
GO:0050776regulation of immune response2 (1.24%)0002000000
GO:0002682regulation of immune system process2 (1.24%)0002000000
GO:0045088regulation of innate immune response2 (1.24%)0002000000
GO:0090352regulation of nitrate assimilation2 (1.24%)0002000000
GO:1901419regulation of response to alcohol2 (1.24%)0002000000
GO:0002831regulation of response to biotic stimulus2 (1.24%)0002000000
GO:2000070regulation of response to water deprivation2 (1.24%)0002000000
GO:0010337regulation of salicylic acid metabolic process2 (1.24%)0002000000
GO:0009966regulation of signal transduction2 (1.24%)0002000000
GO:0023051regulation of signaling2 (1.24%)0002000000
GO:0010112regulation of systemic acquired resistance2 (1.24%)0002000000
GO:0009605response to external stimulus2 (1.24%)0002000000
GO:0009991response to extracellular stimulus2 (1.24%)0002000000
GO:0050826response to freezing2 (1.24%)0002000000
GO:0031667response to nutrient levels2 (1.24%)0002000000
GO:0042594response to starvation2 (1.24%)0002000000
GO:0009696salicylic acid metabolic process2 (1.24%)0002000000
GO:0010431seed maturation2 (1.24%)0000101000
GO:0006949syncytium formation2 (1.24%)0000200000
GO:0009627systemic acquired resistance2 (1.24%)0002000000
GO:0042330taxis2 (1.24%)0002000000
GO:0010136ureide catabolic process2 (1.24%)0001001000
GO:0010135ureide metabolic process2 (1.24%)0001001000
GO:0006310DNA recombination1 (0.62%)0000100000
GO:0048193Golgi vesicle transport1 (0.62%)1000000000
GO:0006739NADP metabolic process1 (0.62%)1000000000
GO:0006740NADPH regeneration1 (0.62%)1000000000
GO:0031123RNA 3'-end processing1 (0.62%)0000000001
GO:0006401RNA catabolic process1 (0.62%)0000000001
GO:0044002acquisition of nutrients from host1 (0.62%)0000010000
GO:0051816acquisition of nutrients from other organism during symbiotic interaction1 (0.62%)0000010000
GO:0009060aerobic respiration1 (0.62%)0100000000
GO:0042886amide transport1 (0.62%)0000001000
GO:0055081anion homeostasis1 (0.62%)0000001000
GO:0019439aromatic compound catabolic process1 (0.62%)0000000001
GO:0007610behavior1 (0.62%)0000010000
GO:0055074calcium ion homeostasis1 (0.62%)0001000000
GO:0046395carboxylic acid catabolic process1 (0.62%)0001000000
GO:0016117carotenoid biosynthetic process1 (0.62%)0000100000
GO:0016116carotenoid metabolic process1 (0.62%)0000100000
GO:0055080cation homeostasis1 (0.62%)0001000000
GO:0007049cell cycle1 (0.62%)0000010000
GO:0022402cell cycle process1 (0.62%)0000010000
GO:0000902cell morphogenesis1 (0.62%)0000001000
GO:0000904cell morphogenesis involved in differentiation1 (0.62%)0000001000
GO:0009932cell tip growth1 (0.62%)0000001000
GO:0032989cellular component morphogenesis1 (0.62%)0000001000
GO:0044242cellular lipid catabolic process1 (0.62%)0001000000
GO:0070727cellular macromolecule localization1 (0.62%)0100000000
GO:0048610cellular process involved in reproduction1 (0.62%)0000001000
GO:0044257cellular protein catabolic process1 (0.62%)0001000000
GO:0034613cellular protein localization1 (0.62%)0100000000
GO:0009902chloroplast relocation1 (0.62%)1000000000
GO:0016568chromatin modification1 (0.62%)0100000000
GO:0006732coenzyme metabolic process1 (0.62%)1000000000
GO:0016569covalent chromatin modification1 (0.62%)0100000000
GO:0000910cytokinesis1 (0.62%)0000010000
GO:0000911cytokinesis by cell plate formation1 (0.62%)0000010000
GO:0032506cytokinetic process1 (0.62%)0000010000
GO:0007010cytoskeleton organization1 (0.62%)0000010000
GO:0044111development involved in symbiotic interaction1 (0.62%)0000010000
GO:0044115development of symbiont involved in interaction with host1 (0.62%)0000010000
GO:0048588developmental cell growth1 (0.62%)0000001000
GO:0060560developmental growth involved in morphogenesis1 (0.62%)0000001000
GO:0072507divalent inorganic cation homeostasis1 (0.62%)0001000000
GO:0006302double-strand break repair1 (0.62%)0000100000
GO:0000724double-strand break repair via homologous recombination1 (0.62%)0000100000
GO:0045003double-strand break repair via synthesis-dependent strand annealing1 (0.62%)0000100000
GO:0022900electron transport chain1 (0.62%)1000000000
GO:0009960endosperm development1 (0.62%)0000001000
GO:0051656establishment of organelle localization1 (0.62%)1000000000
GO:0051667establishment of plastid localization1 (0.62%)1000000000
GO:0006635fatty acid beta-oxidation1 (0.62%)0001000000
GO:0009062fatty acid catabolic process1 (0.62%)0001000000
GO:0006631fatty acid metabolic process1 (0.62%)0001000000
GO:0019395fatty acid oxidation1 (0.62%)0001000000
GO:0007631feeding behavior1 (0.62%)0000010000
GO:0042044fluid transport1 (0.62%)0000001000
GO:0052096formation by symbiont of syncytium involving giant cell for nutrient acquisition from host1 (0.62%)0000010000
GO:0052093formation of specialized structure for nutrient acquisition from host1 (0.62%)0000010000
GO:0052095formation of specialized structure for nutrient acquisition from other organism involved in symbiotic interaction1 (0.62%)0000010000
GO:0046700heterocycle catabolic process1 (0.62%)0000000001
GO:0016571histone methylation1 (0.62%)0100000000
GO:0016570histone modification1 (0.62%)0100000000
GO:0051701interaction with host1 (0.62%)0000010000
GO:0044419interspecies interaction between organisms1 (0.62%)0000010000
GO:0046907intracellular transport1 (0.62%)1000000000
GO:0009965leaf morphogenesis1 (0.62%)0100000000
GO:0016042lipid catabolic process1 (0.62%)0001000000
GO:0030258lipid modification1 (0.62%)0001000000
GO:0034440lipid oxidation1 (0.62%)0001000000
GO:0001676long-chain fatty acid metabolic process1 (0.62%)0001000000
GO:0031124mRNA 3'-end processing1 (0.62%)0000000001
GO:0006402mRNA catabolic process1 (0.62%)0000000001
GO:0016071mRNA metabolic process1 (0.62%)0000000001
GO:0006397mRNA processing1 (0.62%)0000000001
GO:0043414macromolecule methylation1 (0.62%)0100000000
GO:0051235maintenance of location1 (0.62%)0100000000
GO:0051651maintenance of location in cell1 (0.62%)0100000000
GO:0035437maintenance of protein localization in endoplasmic reticulum1 (0.62%)0100000000
GO:0072595maintenance of protein localization in organelle1 (0.62%)0100000000
GO:0045185maintenance of protein location1 (0.62%)0100000000
GO:0032507maintenance of protein location in cell1 (0.62%)0100000000
GO:0061024membrane organization1 (0.62%)1000000000
GO:0035266meristem growth1 (0.62%)1000000000
GO:0010073meristem maintenance1 (0.62%)1000000000
GO:0055065metal ion homeostasis1 (0.62%)0001000000
GO:0032259methylation1 (0.62%)0100000000
GO:0010586miRNA metabolic process1 (0.62%)0100000000
GO:0001578microtubule bundle formation1 (0.62%)0000010000
GO:0000226microtubule cytoskeleton organization1 (0.62%)0000010000
GO:0046785microtubule polymerization1 (0.62%)0000010000
GO:0031109microtubule polymerization or depolymerization1 (0.62%)0000010000
GO:0000278mitotic cell cycle1 (0.62%)0000010000
GO:0000281mitotic cytokinesis1 (0.62%)0000010000
GO:1902410mitotic cytokinetic process1 (0.62%)0000010000
GO:0043632modification-dependent macromolecule catabolic process1 (0.62%)0001000000
GO:0019941modification-dependent protein catabolic process1 (0.62%)0001000000
GO:0072329monocarboxylic acid catabolic process1 (0.62%)0001000000
GO:0051705multi-organism behavior1 (0.62%)0000010000
GO:0034470ncRNA processing1 (0.62%)1000000000
GO:0043086negative regulation of catalytic activity1 (0.62%)0000001000
GO:0060548negative regulation of cell death1 (0.62%)0000001000
GO:0045596negative regulation of cell differentiation1 (0.62%)0100000000
GO:2000117negative regulation of cysteine-type endopeptidase activity1 (0.62%)0000001000
GO:0010951negative regulation of endopeptidase activity1 (0.62%)0000001000
GO:0051346negative regulation of hydrolase activity1 (0.62%)0000001000
GO:0045857negative regulation of molecular function, epigenetic1 (0.62%)0100000000
GO:0010466negative regulation of peptidase activity1 (0.62%)0000001000
GO:0043069negative regulation of programmed cell death1 (0.62%)0000001000
GO:0046496nicotinamide nucleotide metabolic process1 (0.62%)1000000000
GO:0071705nitrogen compound transport1 (0.62%)0000001000
GO:0000280nuclear division1 (0.62%)0000010000
GO:0000956nuclear-transcribed mRNA catabolic process1 (0.62%)0000000001
GO:0000288nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay1 (0.62%)0000000001
GO:0000289nuclear-transcribed mRNA poly(A) tail shortening1 (0.62%)0000000001
GO:0034655nucleobase-containing compound catabolic process1 (0.62%)0000000001
GO:0055086nucleobase-containing small molecule metabolic process1 (0.62%)1000000000
GO:0006753nucleoside phosphate metabolic process1 (0.62%)1000000000
GO:0009117nucleotide metabolic process1 (0.62%)1000000000
GO:0019755one-carbon compound transport1 (0.62%)0000001000
GO:0009887organ morphogenesis1 (0.62%)0100000000
GO:0048285organelle fission1 (0.62%)0000010000
GO:0051640organelle localization1 (0.62%)1000000000
GO:0016054organic acid catabolic process1 (0.62%)0001000000
GO:1901361organic cyclic compound catabolic process1 (0.62%)0000000001
GO:0071702organic substance transport1 (0.62%)0000001000
GO:0006733oxidoreduction coenzyme metabolic process1 (0.62%)1000000000
GO:0006098pentose-phosphate shunt1 (0.62%)1000000000
GO:0055062phosphate ion homeostasis1 (0.62%)0000001000
GO:0009767photosynthetic electron transport chain1 (0.62%)1000000000
GO:0009773photosynthetic electron transport in photosystem I1 (0.62%)1000000000
GO:0051644plastid localization1 (0.62%)1000000000
GO:0009668plastid membrane organization1 (0.62%)1000000000
GO:0009860pollen tube growth1 (0.62%)0000001000
GO:0009886post-embryonic morphogenesis1 (0.62%)0000001000
GO:0012501programmed cell death1 (0.62%)0000001000
GO:0008213protein alkylation1 (0.62%)0100000000
GO:0030163protein catabolic process1 (0.62%)0001000000
GO:0006457protein folding1 (0.62%)0001000000
GO:0070972protein localization to endoplasmic reticulum1 (0.62%)0100000000
GO:0033365protein localization to organelle1 (0.62%)0100000000
GO:0006479protein methylation1 (0.62%)0100000000
GO:0051258protein polymerization1 (0.62%)0000010000
GO:0006621protein retention in ER lumen1 (0.62%)0100000000
GO:0016567protein ubiquitination1 (0.62%)0000100000
GO:0051603proteolysis involved in cellular protein catabolic process1 (0.62%)0001000000
GO:0019362pyridine nucleotide metabolic process1 (0.62%)1000000000
GO:0072524pyridine-containing compound metabolic process1 (0.62%)1000000000
GO:0016072rRNA metabolic process1 (0.62%)1000000000
GO:0006364rRNA processing1 (0.62%)1000000000
GO:0000725recombinational repair1 (0.62%)0000100000
GO:0022603regulation of anatomical structure morphogenesis1 (0.62%)0000001000
GO:0090066regulation of anatomical structure size1 (0.62%)0000001000
GO:0009894regulation of catabolic process1 (0.62%)0000000001
GO:0050790regulation of catalytic activity1 (0.62%)0000001000
GO:0010941regulation of cell death1 (0.62%)0000001000
GO:0060284regulation of cell development1 (0.62%)0000001000
GO:0022604regulation of cell morphogenesis1 (0.62%)0000001000
GO:0010769regulation of cell morphogenesis involved in differentiation1 (0.62%)0000001000
GO:0008361regulation of cell size1 (0.62%)0000001000
GO:0031329regulation of cellular catabolic process1 (0.62%)0000000001
GO:0032535regulation of cellular component size1 (0.62%)0000001000
GO:2000116regulation of cysteine-type endopeptidase activity1 (0.62%)0000001000
GO:0052548regulation of endopeptidase activity1 (0.62%)0000001000
GO:2000014regulation of endosperm development1 (0.62%)0000001000
GO:0051336regulation of hydrolase activity1 (0.62%)0000001000
GO:0032879regulation of localization1 (0.62%)1000000000
GO:0031440regulation of mRNA 3'-end processing1 (0.62%)0000000001
GO:0061013regulation of mRNA catabolic process1 (0.62%)0000000001
GO:0050684regulation of mRNA processing1 (0.62%)0000000001
GO:0010075regulation of meristem growth1 (0.62%)1000000000
GO:0040030regulation of molecular function, epigenetic1 (0.62%)0100000000
GO:1900151regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay1 (0.62%)0000000001
GO:0060211regulation of nuclear-transcribed mRNA poly(A) tail shortening1 (0.62%)0000000001
GO:0052547regulation of peptidase activity1 (0.62%)0000001000
GO:0080092regulation of pollen tube growth1 (0.62%)0000001000
GO:0043067regulation of programmed cell death1 (0.62%)0000001000
GO:0032880regulation of protein localization1 (0.62%)1000000000
GO:0080050regulation of seed development1 (0.62%)0000001000
GO:0010029regulation of seed germination1 (0.62%)0000100000
GO:1900140regulation of seedling development1 (0.62%)0000100000
GO:1902183regulation of shoot apical meristem development1 (0.62%)0100000000
GO:0051510regulation of unidimensional cell growth1 (0.62%)0000001000
GO:0009646response to absence of light1 (0.62%)0000001000
GO:0009741response to brassinosteroid1 (0.62%)1000000000
GO:0009642response to light intensity1 (0.62%)0000001000
GO:0009624response to nematode1 (0.62%)0000010000
GO:0009611response to wounding1 (0.62%)0000000001
GO:0022613ribonucleoprotein complex biogenesis1 (0.62%)1000000000
GO:0042254ribosome biogenesis1 (0.62%)1000000000
GO:0009845seed germination1 (0.62%)0000100000
GO:0048317seed morphogenesis1 (0.62%)0000001000
GO:0090351seedling development1 (0.62%)0000100000
GO:1902182shoot apical meristem development1 (0.62%)0100000000
GO:0010016shoot system morphogenesis1 (0.62%)0100000000
GO:0044802single-organism membrane organization1 (0.62%)1000000000
GO:0035019somatic stem cell maintenance1 (0.62%)0100000000
GO:0048864stem cell development1 (0.62%)0100000000
GO:0048863stem cell differentiation1 (0.62%)0100000000
GO:0019827stem cell maintenance1 (0.62%)0100000000
GO:0044403symbiosis, encompassing mutualism through parasitism1 (0.62%)0000010000
GO:0016109tetraterpenoid biosynthetic process1 (0.62%)0000100000
GO:0016108tetraterpenoid metabolic process1 (0.62%)0000100000
GO:0010027thylakoid membrane organization1 (0.62%)1000000000
GO:0042793transcription from plastid promoter1 (0.62%)1000000000
GO:0006412translation1 (0.62%)0000000001
GO:0006413translational initiation1 (0.62%)0000000001
GO:0006099tricarboxylic acid cycle1 (0.62%)0100000000
GO:0072506trivalent inorganic anion homeostasis1 (0.62%)0000001000
GO:0006511ubiquitin-dependent protein catabolic process1 (0.62%)0001000000
GO:0009826unidimensional cell growth1 (0.62%)0000001000
GO:0015840urea transport1 (0.62%)0000001000
GO:0016192vesicle-mediated transport1 (0.62%)1000000000
GO:0006833water transport1 (0.62%)0000001000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding91 (56.52%)212513257123111
GO:1901363heterocyclic compound binding64 (39.75%)294102046315
GO:0097159organic cyclic compound binding64 (39.75%)294102046315
GO:0003676nucleic acid binding54 (33.54%)29371934313
GO:0005515protein binding53 (32.92%)16371726317
GO:0003677DNA binding48 (29.81%)17351934312
GO:0003824catalytic activity47 (29.19%)06581057006
GO:0043167ion binding35 (21.74%)04271027003
GO:0001071nucleic acid binding transcription factor activity29 (18.01%)03231032312
GO:0003700sequence-specific DNA binding transcription factor activity29 (18.01%)03231032312
GO:0043169cation binding22 (13.66%)0214626001
GO:0046872metal ion binding22 (13.66%)0214626001
GO:0043168anion binding18 (11.18%)0224502003
GO:0036094small molecule binding18 (11.18%)0224402004
GO:1901265nucleoside phosphate binding15 (9.32%)0223302003
GO:0000166nucleotide binding15 (9.32%)0223302003
GO:0046914transition metal ion binding14 (8.70%)0113602001
GO:0097367carbohydrate derivative binding13 (8.07%)0222302002
GO:0016787hydrolase activity13 (8.07%)0014123002
GO:0000975regulatory region DNA binding13 (8.07%)0210511111
GO:0001067regulatory region nucleic acid binding13 (8.07%)0210511111
GO:0032553ribonucleotide binding13 (8.07%)0222302002
GO:0044212transcription regulatory region DNA binding13 (8.07%)0210511111
GO:0016740transferase activity13 (8.07%)0212112004
GO:0008270zinc ion binding12 (7.45%)0113402001
GO:0016491oxidoreductase activity10 (6.21%)0121321000
GO:0005524ATP binding9 (5.59%)0012202002
GO:0030554adenyl nucleotide binding9 (5.59%)0012202002
GO:0032559adenyl ribonucleotide binding9 (5.59%)0012202002
GO:0060089molecular transducer activity9 (5.59%)0210300111
GO:0001882nucleoside binding9 (5.59%)0012202002
GO:0000156phosphorelay response regulator activity9 (5.59%)0210300111
GO:0001883purine nucleoside binding9 (5.59%)0012202002
GO:0017076purine nucleotide binding9 (5.59%)0012202002
GO:0032550purine ribonucleoside binding9 (5.59%)0012202002
GO:0035639purine ribonucleoside triphosphate binding9 (5.59%)0012202002
GO:0032555purine ribonucleotide binding9 (5.59%)0012202002
GO:0032549ribonucleoside binding9 (5.59%)0012202002
GO:0004871signal transducer activity9 (5.59%)0210300111
GO:0046983protein dimerization activity8 (4.97%)0201301001
GO:0016772transferase activity, transferring phosphorus-containing groups8 (4.97%)0111111002
GO:0016881acid-amino acid ligase activity7 (4.35%)0102102001
GO:0016830carbon-carbon lyase activity7 (4.35%)0210400000
GO:0016874ligase activity7 (4.35%)0102102001
GO:0016879ligase activity, forming carbon-nitrogen bonds7 (4.35%)0102102001
GO:0016829lyase activity7 (4.35%)0210400000
GO:0046982protein heterodimerization activity7 (4.35%)0201301000
GO:0043565sequence-specific DNA binding7 (4.35%)0100312000
GO:0003723RNA binding5 (3.11%)1200001001
GO:0003682chromatin binding5 (3.11%)0001211000
GO:0050662coenzyme binding5 (3.11%)0211100000
GO:0048037cofactor binding5 (3.11%)0211100000
GO:0008092cytoskeletal protein binding5 (3.11%)0011011001
GO:0016817hydrolase activity, acting on acid anhydrides5 (3.11%)0011101001
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides5 (3.11%)0011101001
GO:0008017microtubule binding5 (3.11%)0011011001
GO:0017111nucleoside-triphosphatase activity5 (3.11%)0011101001
GO:0000988protein binding transcription factor activity5 (3.11%)0110110001
GO:0032403protein complex binding5 (3.11%)0011011001
GO:0016462pyrophosphatase activity5 (3.11%)0011101001
GO:0015631tubulin binding5 (3.11%)0011011001
GO:0003913DNA photolyase activity4 (2.48%)0210100000
GO:0003899DNA-directed RNA polymerase activity4 (2.48%)0010110001
GO:0010181FMN binding4 (2.48%)0210100000
GO:0034062RNA polymerase activity4 (2.48%)0010110001
GO:0000996core DNA-dependent RNA polymerase binding promoter specificity activity4 (2.48%)0010110001
GO:0000990core RNA polymerase binding transcription factor activity4 (2.48%)0010110001
GO:0016788hydrolase activity, acting on ester bonds4 (2.48%)0001021000
GO:0016301kinase activity4 (2.48%)0101001001
GO:0003777microtubule motor activity4 (2.48%)0011001001
GO:0003774motor activity4 (2.48%)0011001001
GO:0016779nucleotidyltransferase activity4 (2.48%)0010110001
GO:0016773phosphotransferase activity, alcohol group as acceptor4 (2.48%)0101001001
GO:0001053plastid sigma factor activity4 (2.48%)0010110001
GO:0016987sigma factor activity4 (2.48%)0010110001
GO:0019787small conjugating protein ligase activity4 (2.48%)0002101000
GO:0004014adenosylmethionine decarboxylase activity3 (1.86%)0000300000
GO:0016597amino acid binding3 (1.86%)0001100001
GO:0016831carboxy-lyase activity3 (1.86%)0000300000
GO:0031406carboxylic acid binding3 (1.86%)0001100001
GO:0010279indole-3-acetic acid amido synthetase activity3 (1.86%)0100001001
GO:0043177organic acid binding3 (1.86%)0001100001
GO:0003727single-stranded RNA binding3 (1.86%)0100001001
GO:00086611-deoxy-D-xylulose-5-phosphate synthase activity2 (1.24%)0100001000
GO:0019789SUMO ligase activity2 (1.24%)0002000000
GO:0031420alkali metal ion binding2 (1.24%)0100001000
GO:0047652allantoate deiminase activity2 (1.24%)0001001000
GO:0051213dioxygenase activity2 (1.24%)0010010000
GO:0009055electron carrier activity2 (1.24%)0100100000
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2 (1.24%)0001001000
GO:0016813hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines2 (1.24%)0001001000
GO:0016798hydrolase activity, acting on glycosyl bonds2 (1.24%)0001000001
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds2 (1.24%)0001000001
GO:0050113inositol oxygenase activity2 (1.24%)0000200000
GO:0005506iron ion binding2 (1.24%)0000200000
GO:0000287magnesium ion binding2 (1.24%)0100001000
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2 (1.24%)0010010000
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2 (1.24%)0010010000
GO:0016701oxidoreductase activity, acting on single donors with incorporation of molecular oxygen2 (1.24%)0000200000
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors2 (1.24%)0011000000
GO:0008233peptidase activity2 (1.24%)0001001000
GO:0030955potassium ion binding2 (1.24%)0100001000
GO:0004672protein kinase activity2 (1.24%)0001000001
GO:0004674protein serine/threonine kinase activity2 (1.24%)0001000001
GO:0004743pyruvate kinase activity2 (1.24%)0100001000
GO:0005198structural molecule activity2 (1.24%)0001000001
GO:0016744transferase activity, transferring aldehyde or ketonic groups2 (1.24%)0100001000
GO:0016757transferase activity, transferring glycosyl groups2 (1.24%)0001000001
GO:0016758transferase activity, transferring hexosyl groups2 (1.24%)0001000001
GO:0004842ubiquitin-protein ligase activity2 (1.24%)0000101000
GO:0016762xyloglucan:xyloglucosyl transferase activity2 (1.24%)0001000001
GO:00515372 iron, 2 sulfur cluster binding1 (0.62%)0100000000
GO:0046923ER retention sequence binding1 (0.62%)0100000000
GO:0005088Ras guanyl-nucleotide exchange factor activity1 (0.62%)0000001000
GO:0005089Rho guanyl-nucleotide exchange factor activity1 (0.62%)0000001000
GO:0003993acid phosphatase activity1 (0.62%)0000001000
GO:0003995acyl-CoA dehydrogenase activity1 (0.62%)0001000000
GO:0003997acyl-CoA oxidase activity1 (0.62%)0001000000
GO:0033218amide binding1 (0.62%)0100000000
GO:0042887amide transmembrane transporter activity1 (0.62%)0000001000
GO:0016209antioxidant activity1 (0.62%)0000010000
GO:0005509calcium ion binding1 (0.62%)0001000000
GO:0052689carboxylic ester hydrolase activity1 (0.62%)0000010000
GO:0015267channel activity1 (0.62%)0000001000
GO:0050660flavin adenine dinucleotide binding1 (0.62%)0001000000
GO:0045550geranylgeranyl reductase activity1 (0.62%)0010000000
GO:0005085guanyl-nucleotide exchange factor activity1 (0.62%)0000001000
GO:0004386helicase activity1 (0.62%)0000100000
GO:0020037heme binding1 (0.62%)0000010000
GO:0051536iron-sulfur cluster binding1 (0.62%)0100000000
GO:0016853isomerase activity1 (0.62%)0000100000
GO:0016298lipase activity1 (0.62%)0000010000
GO:0008289lipid binding1 (0.62%)0000100000
GO:0003729mRNA binding1 (0.62%)0000000001
GO:0051540metal cluster binding1 (0.62%)0100000000
GO:0008237metallopeptidase activity1 (0.62%)0001000000
GO:0035198miRNA binding1 (0.62%)0100000000
GO:0016684oxidoreductase activity, acting on peroxide as acceptor1 (0.62%)0000010000
GO:0016628oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1 (0.62%)0010000000
GO:0016634oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor1 (0.62%)0001000000
GO:0016903oxidoreductase activity, acting on the aldehyde or oxo group of donors1 (0.62%)0000001000
GO:0016624oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor1 (0.62%)0000001000
GO:0022803passive transmembrane transporter activity1 (0.62%)0000001000
GO:0070011peptidase activity, acting on L-amino acid peptides1 (0.62%)0001000000
GO:0042277peptide binding1 (0.62%)0100000000
GO:0004601peroxidase activity1 (0.62%)0000010000
GO:0016791phosphatase activity1 (0.62%)0000001000
GO:0005543phospholipid binding1 (0.62%)0000100000
GO:0042578phosphoric ester hydrolase activity1 (0.62%)0000001000
GO:0008143poly(A) RNA binding1 (0.62%)0000000001
GO:0070717poly-purine tract binding1 (0.62%)0000000001
GO:0005048signal sequence binding1 (0.62%)0100000000
GO:0030527structural constituent of chromatin1 (0.62%)0001000000
GO:0022838substrate-specific channel activity1 (0.62%)0000001000
GO:0022891substrate-specific transmembrane transporter activity1 (0.62%)0000001000
GO:0022892substrate-specific transporter activity1 (0.62%)0000001000
GO:0016783sulfurtransferase activity1 (0.62%)0000000001
GO:0046906tetrapyrrole binding1 (0.62%)0000010000
GO:0016790thiolester hydrolase activity1 (0.62%)0001000000
GO:0004792thiosulfate sulfurtransferase activity1 (0.62%)0000000001
GO:0003713transcription coactivator activity1 (0.62%)0100000000
GO:0003712transcription cofactor activity1 (0.62%)0100000000
GO:0000989transcription factor binding transcription factor activity1 (0.62%)0100000000
GO:0016782transferase activity, transferring sulfur-containing groups1 (0.62%)0000000001
GO:0022857transmembrane transporter activity1 (0.62%)0000001000
GO:0005215transporter activity1 (0.62%)0000001000
GO:0004806triglyceride lipase activity1 (0.62%)0000010000
GO:0004221ubiquitin thiolesterase activity1 (0.62%)0001000000
GO:0051082unfolded protein binding1 (0.62%)0001000000
GO:0015204urea transmembrane transporter activity1 (0.62%)0000001000
GO:0015250water channel activity1 (0.62%)0000001000
GO:0005372water transmembrane transporter activity1 (0.62%)0000001000