Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchMapMan terms associated with a binding site
- Binding site
- Motif_557
- Name
- WRKY43;WRKY38;WRKY26
- Description
- Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function
- #Associated genes
- 29
- #Associated MapMan terms
- 37
Click table-header(s) to enable sorting
| MapMan | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27 | RNA | 4 (13.79%) | 0 | 0 | 0 | 1 | 0 | 3 | 0 | 0 | 0 | 0 |
| 27.3 | RNA.regulation of transcription | 4 (13.79%) | 0 | 0 | 0 | 1 | 0 | 3 | 0 | 0 | 0 | 0 |
| 33 | development | 4 (13.79%) | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 |
| 33.99 | development.unspecified | 4 (13.79%) | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 |
| 26 | misc | 3 (10.34%) | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 |
| 26.2 | misc.UDP glucosyl and glucoronyl transferases | 2 (6.90%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| 27.3.32 | RNA.regulation of transcription.WRKY domain transcription factor family | 2 (6.90%) | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| 8 | TCA / org transformation | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| 11 | lipid metabolism | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| 11.9 | lipid metabolism.lipid degradation | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| 11.9.4 | lipid metabolism.lipid degradation.beta-oxidation | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| 11.9.4.2 | lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| 13 | amino acid metabolism | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 13.1 | amino acid metabolism.synthesis | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 13.1.1 | amino acid metabolism.synthesis.central amino acid metabolism | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 13.1.1.3 | amino acid metabolism.synthesis.central amino acid metabolism.alanine | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 13.1.1.3.1 | amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 16 | secondary metabolism | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| 16.10 | secondary metabolism.simple phenols | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| 17 | hormone metabolism | 1 (3.45%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 17.4 | hormone metabolism.cytokinin | 1 (3.45%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 17.4.1 | hormone metabolism.cytokinin.synthesis-degradation | 1 (3.45%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 20 | stress | 1 (3.45%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 20.1 | stress.biotic | 1 (3.45%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 20.1.7 | stress.biotic.PR-proteins | 1 (3.45%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 26.10 | misc.cytochrome P450 | 1 (3.45%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 27.3.18 | RNA.regulation of transcription.E2F/DP transcription factor family | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 27.3.29 | RNA.regulation of transcription.TCP transcription factor family | 1 (3.45%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| 8.1 | TCA / org transformation.TCA | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| 29.4 | protein.postranslational modification | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 29.5.11.4.2 | protein.degradation.ubiquitin.E3.RING | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 30.2 | signalling.receptor kinases | 1 (3.45%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 30.2.11 | signalling.receptor kinases.leucine rich repeat XI | 1 (3.45%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 8.1.1 | TCA / org transformation.TCA.pyruvate DH | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| 8.1.1.2 | TCA / org transformation.TCA.pyruvate DH.E2 | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| 29 | protein | 1 (3.45%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 30 | signalling | 1 (3.45%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |