Gene Ontology terms associated with a binding site

Binding site
Motif_555
Name
ABRECE3ZMRAB28
Description
CE3 (coupling element 3) in maize rab28 gene promoter; ABA responsive element; stress response; Similar (10 of 12) to CE3 in A1 gene of barley; See ABRECE3HVA1; Found at -126 to -115
#Associated genes
3
#Associated GO terms
86
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding2 (66.67%)0100100000
GO:00515394 iron, 4 sulfur cluster binding1 (33.33%)0000100000
GO:0051536iron-sulfur cluster binding1 (33.33%)0000100000
GO:0051540metal cluster binding1 (33.33%)0000100000
GO:0001071nucleic acid binding transcription factor activity1 (33.33%)0100000000
GO:0005515protein binding1 (33.33%)0100000000
GO:0046983protein dimerization activity1 (33.33%)0100000000
GO:0003700sequence-specific DNA binding transcription factor activity1 (33.33%)0100000000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0008152metabolic process2 (66.67%)0100100000
GO:0032774RNA biosynthetic process1 (33.33%)0100000000
GO:0016070RNA metabolic process1 (33.33%)0100000000
GO:0019438aromatic compound biosynthetic process1 (33.33%)0100000000
GO:0065007biological regulation1 (33.33%)0100000000
GO:0009058biosynthetic process1 (33.33%)0100000000
GO:0055080cation homeostasis1 (33.33%)0100000000
GO:0007154cell communication1 (33.33%)0100000000
GO:0006725cellular aromatic compound metabolic process1 (33.33%)0100000000
GO:0044249cellular biosynthetic process1 (33.33%)0100000000
GO:0034645cellular macromolecule biosynthetic process1 (33.33%)0100000000
GO:0044260cellular macromolecule metabolic process1 (33.33%)0100000000
GO:0044237cellular metabolic process1 (33.33%)0100000000
GO:0044271cellular nitrogen compound biosynthetic process1 (33.33%)0100000000
GO:0034641cellular nitrogen compound metabolic process1 (33.33%)0100000000
GO:0009987cellular process1 (33.33%)0100000000
GO:0071496cellular response to external stimulus1 (33.33%)0100000000
GO:0031668cellular response to extracellular stimulus1 (33.33%)0100000000
GO:0010106cellular response to iron ion starvation1 (33.33%)0100000000
GO:0031669cellular response to nutrient levels1 (33.33%)0100000000
GO:0009267cellular response to starvation1 (33.33%)0100000000
GO:0051716cellular response to stimulus1 (33.33%)0100000000
GO:0033554cellular response to stress1 (33.33%)0100000000
GO:0048878chemical homeostasis1 (33.33%)0100000000
GO:0010467gene expression1 (33.33%)0100000000
GO:0018130heterocycle biosynthetic process1 (33.33%)0100000000
GO:0046483heterocycle metabolic process1 (33.33%)0100000000
GO:0042592homeostatic process1 (33.33%)0100000000
GO:0050801ion homeostasis1 (33.33%)0100000000
GO:0055072iron ion homeostasis1 (33.33%)0100000000
GO:0009059macromolecule biosynthetic process1 (33.33%)0100000000
GO:0043170macromolecule metabolic process1 (33.33%)0100000000
GO:0055065metal ion homeostasis1 (33.33%)0100000000
GO:0006807nitrogen compound metabolic process1 (33.33%)0100000000
GO:0090304nucleic acid metabolic process1 (33.33%)0100000000
GO:0034654nucleobase-containing compound biosynthetic process1 (33.33%)0100000000
GO:0006139nucleobase-containing compound metabolic process1 (33.33%)0100000000
GO:1901362organic cyclic compound biosynthetic process1 (33.33%)0100000000
GO:1901360organic cyclic compound metabolic process1 (33.33%)0100000000
GO:1901576organic substance biosynthetic process1 (33.33%)0100000000
GO:0071704organic substance metabolic process1 (33.33%)0100000000
GO:0044238primary metabolic process1 (33.33%)0100000000
GO:2001141regulation of RNA biosynthetic process1 (33.33%)0100000000
GO:0051252regulation of RNA metabolic process1 (33.33%)0100000000
GO:0050789regulation of biological process1 (33.33%)0100000000
GO:0065008regulation of biological quality1 (33.33%)0100000000
GO:0009889regulation of biosynthetic process1 (33.33%)0100000000
GO:0031326regulation of cellular biosynthetic process1 (33.33%)0100000000
GO:2000112regulation of cellular macromolecule biosynthetic process1 (33.33%)0100000000
GO:0031323regulation of cellular metabolic process1 (33.33%)0100000000
GO:0050794regulation of cellular process1 (33.33%)0100000000
GO:0010468regulation of gene expression1 (33.33%)0100000000
GO:0010556regulation of macromolecule biosynthetic process1 (33.33%)0100000000
GO:0060255regulation of macromolecule metabolic process1 (33.33%)0100000000
GO:0019222regulation of metabolic process1 (33.33%)0100000000
GO:0051171regulation of nitrogen compound metabolic process1 (33.33%)0100000000
GO:0019219regulation of nucleobase-containing compound metabolic process1 (33.33%)0100000000
GO:0080090regulation of primary metabolic process1 (33.33%)0100000000
GO:0006355regulation of transcription, DNA-dependent1 (33.33%)0100000000
GO:0009605response to external stimulus1 (33.33%)0100000000
GO:0009991response to extracellular stimulus1 (33.33%)0100000000
GO:0031667response to nutrient levels1 (33.33%)0100000000
GO:0042594response to starvation1 (33.33%)0100000000
GO:0050896response to stimulus1 (33.33%)0100000000
GO:0006950response to stress1 (33.33%)0100000000
GO:0044763single-organism cellular process1 (33.33%)0100000000
GO:0044699single-organism process1 (33.33%)0100000000
GO:0006351transcription, DNA-templated1 (33.33%)0100000000
GO:0055076transition metal ion homeostasis1 (33.33%)0100000000

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell1 (33.33%)0100000000
GO:0044464cell part1 (33.33%)0100000000
GO:0005622intracellular1 (33.33%)0100000000
GO:0043231intracellular membrane-bounded organelle1 (33.33%)0100000000
GO:0043229intracellular organelle1 (33.33%)0100000000
GO:0044424intracellular part1 (33.33%)0100000000
GO:0043227membrane-bounded organelle1 (33.33%)0100000000
GO:0005634nucleus1 (33.33%)0100000000
GO:0043226organelle1 (33.33%)0100000000