PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_554
Name: AtLHY;AtCCA1
Description: LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms

#Associated genes: 14
#Associated MapMan terms: 16

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MapMan	Description	#Associated genes	atr	aly	ath	bvu	bra	cru	cpa	cre	cla	csi	cme	egr	fve	gma	gra	lja	mdo	mes	mtr	osa	olu	ppa	ptr	ppe	rco	sly	stu	tpa	tca	vvi	zma
27	RNA	7 (50.00%)	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	1	0
27.3	RNA.regulation of transcription	7 (50.00%)	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	1	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	3 (21.43%)	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
1	PS	2 (14.29%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0
1.1	PS.lightreaction	2 (14.29%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	2 (14.29%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	1 (7.14%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (7.14%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
27.3.42	RNA.regulation of transcription.Bromodomain proteins	1 (7.14%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
27.3.99	RNA.regulation of transcription.unclassified	1 (7.14%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
29.2.1.2.1.5	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S5	1 (7.14%)	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
30	signalling	1 (7.14%)	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
30.2	signalling.receptor kinases	1 (7.14%)	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (7.14%)	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
34	transport	1 (7.14%)	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
34.30	transport.H+ transporting pyrophosphatase	1 (7.14%)	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0