Gene Ontology terms associated with a binding site

Binding site
Motif_554
Name
AtLHY;AtCCA1
Description
LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms
#Associated genes
14
#Associated GO terms
286
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding11 (78.57%)1201120103
GO:1901363heterocyclic compound binding10 (71.43%)1201120102
GO:0097159organic cyclic compound binding10 (71.43%)1201120102
GO:0003824catalytic activity6 (42.86%)0101001102
GO:0003676nucleic acid binding6 (42.86%)1200120000
GO:0003677DNA binding5 (35.71%)1200020000
GO:0001071nucleic acid binding transcription factor activity4 (28.57%)1100020000
GO:1901265nucleoside phosphate binding4 (28.57%)0001000102
GO:0000166nucleotide binding4 (28.57%)0001000102
GO:0003700sequence-specific DNA binding transcription factor activity4 (28.57%)1100020000
GO:0036094small molecule binding4 (28.57%)0001000102
GO:0051287NAD binding3 (21.43%)0000000102
GO:0003682chromatin binding3 (21.43%)1200000000
GO:0050662coenzyme binding3 (21.43%)0000000102
GO:0048037cofactor binding3 (21.43%)0000000102
GO:0060089molecular transducer activity3 (21.43%)1200000000
GO:0016491oxidoreductase activity3 (21.43%)0000000102
GO:0016651oxidoreductase activity, acting on NAD(P)H3 (21.43%)0000000102
GO:0000156phosphorelay response regulator activity3 (21.43%)1200000000
GO:0048038quinone binding3 (21.43%)0000000102
GO:0004871signal transducer activity3 (21.43%)1200000000
GO:0016787hydrolase activity2 (14.29%)0100001000
GO:0005524ATP binding1 (7.14%)0001000000
GO:0003954NADH dehydrogenase activity1 (7.14%)0000000001
GO:0015405P-P-bond-hydrolysis-driven transmembrane transporter activity1 (7.14%)0100000000
GO:0003723RNA binding1 (7.14%)0000100000
GO:0022804active transmembrane transporter activity1 (7.14%)0100000000
GO:0030554adenyl nucleotide binding1 (7.14%)0001000000
GO:0032559adenyl ribonucleotide binding1 (7.14%)0001000000
GO:0043168anion binding1 (7.14%)0001000000
GO:0004190aspartic-type endopeptidase activity1 (7.14%)0000001000
GO:0070001aspartic-type peptidase activity1 (7.14%)0000001000
GO:0097367carbohydrate derivative binding1 (7.14%)0001000000
GO:0004175endopeptidase activity1 (7.14%)0000001000
GO:0009678hydrogen-translocating pyrophosphatase activity1 (7.14%)0100000000
GO:0016817hydrolase activity, acting on acid anhydrides1 (7.14%)0100000000
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides1 (7.14%)0100000000
GO:0004427inorganic diphosphatase activity1 (7.14%)0100000000
GO:0043167ion binding1 (7.14%)0001000000
GO:0016301kinase activity1 (7.14%)0001000000
GO:0001882nucleoside binding1 (7.14%)0001000000
GO:0008233peptidase activity1 (7.14%)0000001000
GO:0070011peptidase activity, acting on L-amino acid peptides1 (7.14%)0000001000
GO:0016773phosphotransferase activity, alcohol group as acceptor1 (7.14%)0001000000
GO:0015399primary active transmembrane transporter activity1 (7.14%)0100000000
GO:0005515protein binding1 (7.14%)0000000001
GO:0004672protein kinase activity1 (7.14%)0001000000
GO:0004674protein serine/threonine kinase activity1 (7.14%)0001000000
GO:0001883purine nucleoside binding1 (7.14%)0001000000
GO:0017076purine nucleotide binding1 (7.14%)0001000000
GO:0032550purine ribonucleoside binding1 (7.14%)0001000000
GO:0035639purine ribonucleoside triphosphate binding1 (7.14%)0001000000
GO:0032555purine ribonucleotide binding1 (7.14%)0001000000
GO:0016462pyrophosphatase activity1 (7.14%)0100000000
GO:0032549ribonucleoside binding1 (7.14%)0001000000
GO:0032553ribonucleotide binding1 (7.14%)0001000000
GO:0043565sequence-specific DNA binding1 (7.14%)0000010000
GO:0003735structural constituent of ribosome1 (7.14%)0000100000
GO:0005198structural molecule activity1 (7.14%)0000100000
GO:0016740transferase activity1 (7.14%)0001000000
GO:0016772transferase activity, transferring phosphorus-containing groups1 (7.14%)0001000000
GO:0022857transmembrane transporter activity1 (7.14%)0100000000
GO:0005215transporter activity1 (7.14%)0100000000

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell7 (50.00%)1200120001
GO:0044464cell part7 (50.00%)1200120001
GO:0005622intracellular7 (50.00%)1200120001
GO:0043231intracellular membrane-bounded organelle7 (50.00%)1200120001
GO:0043229intracellular organelle7 (50.00%)1200120001
GO:0044424intracellular part7 (50.00%)1200120001
GO:0043227membrane-bounded organelle7 (50.00%)1200120001
GO:0043226organelle7 (50.00%)1200120001
GO:0016020membrane5 (35.71%)0100100102
GO:0005634nucleus5 (35.71%)1200020000
GO:0005737cytoplasm2 (14.29%)0000100001
GO:0044444cytoplasmic part2 (14.29%)0000100001
GO:0044446intracellular organelle part2 (14.29%)0000100001
GO:0032991macromolecular complex2 (14.29%)0000100001
GO:0031090organelle membrane2 (14.29%)0000100001
GO:0044422organelle part2 (14.29%)0000100001
GO:0030964NADH dehydrogenase complex1 (7.14%)0000000001
GO:1902494catalytic complex1 (7.14%)0000000001
GO:0030054cell junction1 (7.14%)0000100000
GO:0071944cell periphery1 (7.14%)0000100000
GO:0005618cell wall1 (7.14%)0000100000
GO:0005911cell-cell junction1 (7.14%)0000100000
GO:0009507chloroplast1 (7.14%)0000100000
GO:0005829cytosol1 (7.14%)0000100000
GO:0044445cytosolic part1 (7.14%)0000100000
GO:0022626cytosolic ribosome1 (7.14%)0000100000
GO:0022627cytosolic small ribosomal subunit1 (7.14%)0000100000
GO:0031975envelope1 (7.14%)0000000001
GO:0030312external encapsulating structure1 (7.14%)0000100000
GO:0043232intracellular non-membrane-bounded organelle1 (7.14%)0000100000
GO:0044425membrane part1 (7.14%)0000000001
GO:0005740mitochondrial envelope1 (7.14%)0000000001
GO:0005743mitochondrial inner membrane1 (7.14%)0000000001
GO:0031966mitochondrial membrane1 (7.14%)0000000001
GO:0044455mitochondrial membrane part1 (7.14%)0000000001
GO:0044429mitochondrial part1 (7.14%)0000000001
GO:0005746mitochondrial respiratory chain1 (7.14%)0000000001
GO:0005747mitochondrial respiratory chain complex I1 (7.14%)0000000001
GO:0005739mitochondrion1 (7.14%)0000000001
GO:0043228non-membrane-bounded organelle1 (7.14%)0000100000
GO:0031967organelle envelope1 (7.14%)0000000001
GO:0019866organelle inner membrane1 (7.14%)0000000001
GO:1990204oxidoreductase complex1 (7.14%)0000000001
GO:0005886plasma membrane1 (7.14%)0000100000
GO:0009506plasmodesma1 (7.14%)0000100000
GO:0009536plastid1 (7.14%)0000100000
GO:0043234protein complex1 (7.14%)0000000001
GO:0070469respiratory chain1 (7.14%)0000000001
GO:0045271respiratory chain complex I1 (7.14%)0000000001
GO:0030529ribonucleoprotein complex1 (7.14%)0000100000
GO:0044391ribosomal subunit1 (7.14%)0000100000
GO:0005840ribosome1 (7.14%)0000100000
GO:0015935small ribosomal subunit1 (7.14%)0000100000
GO:0055044symplast1 (7.14%)0000100000
GO:0005774vacuolar membrane1 (7.14%)0000100000
GO:0044437vacuolar part1 (7.14%)0000100000
GO:0005773vacuole1 (7.14%)0000100000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0008152metabolic process11 (78.57%)1201121102
GO:0044237cellular metabolic process8 (57.14%)1201120001
GO:0009987cellular process8 (57.14%)1201120001
GO:0043170macromolecule metabolic process8 (57.14%)1201121000
GO:0071704organic substance metabolic process8 (57.14%)1201121000
GO:0044238primary metabolic process8 (57.14%)1201121000
GO:0044699single-organism process8 (57.14%)1300010102
GO:0044260cellular macromolecule metabolic process7 (50.00%)1201120000
GO:0009058biosynthetic process6 (42.86%)1200120000
GO:0044249cellular biosynthetic process6 (42.86%)1200120000
GO:0034645cellular macromolecule biosynthetic process6 (42.86%)1200120000
GO:0010467gene expression6 (42.86%)1200120000
GO:0009059macromolecule biosynthetic process6 (42.86%)1200120000
GO:1901576organic substance biosynthetic process6 (42.86%)1200120000
GO:0032774RNA biosynthetic process5 (35.71%)1200020000
GO:0016070RNA metabolic process5 (35.71%)1200020000
GO:0019438aromatic compound biosynthetic process5 (35.71%)1200020000
GO:0065007biological regulation5 (35.71%)1200020000
GO:0006725cellular aromatic compound metabolic process5 (35.71%)1200020000
GO:0044271cellular nitrogen compound biosynthetic process5 (35.71%)1200020000
GO:0034641cellular nitrogen compound metabolic process5 (35.71%)1200020000
GO:0018130heterocycle biosynthetic process5 (35.71%)1200020000
GO:0046483heterocycle metabolic process5 (35.71%)1200020000
GO:0006807nitrogen compound metabolic process5 (35.71%)1200020000
GO:0090304nucleic acid metabolic process5 (35.71%)1200020000
GO:0034654nucleobase-containing compound biosynthetic process5 (35.71%)1200020000
GO:0006139nucleobase-containing compound metabolic process5 (35.71%)1200020000
GO:1901362organic cyclic compound biosynthetic process5 (35.71%)1200020000
GO:1901360organic cyclic compound metabolic process5 (35.71%)1200020000
GO:2001141regulation of RNA biosynthetic process5 (35.71%)1200020000
GO:0051252regulation of RNA metabolic process5 (35.71%)1200020000
GO:0050789regulation of biological process5 (35.71%)1200020000
GO:0009889regulation of biosynthetic process5 (35.71%)1200020000
GO:0031326regulation of cellular biosynthetic process5 (35.71%)1200020000
GO:2000112regulation of cellular macromolecule biosynthetic process5 (35.71%)1200020000
GO:0031323regulation of cellular metabolic process5 (35.71%)1200020000
GO:0050794regulation of cellular process5 (35.71%)1200020000
GO:0010468regulation of gene expression5 (35.71%)1200020000
GO:0010556regulation of macromolecule biosynthetic process5 (35.71%)1200020000
GO:0060255regulation of macromolecule metabolic process5 (35.71%)1200020000
GO:0019222regulation of metabolic process5 (35.71%)1200020000
GO:0051171regulation of nitrogen compound metabolic process5 (35.71%)1200020000
GO:0019219regulation of nucleobase-containing compound metabolic process5 (35.71%)1200020000
GO:0080090regulation of primary metabolic process5 (35.71%)1200020000
GO:0006355regulation of transcription, DNA-dependent5 (35.71%)1200020000
GO:0050896response to stimulus5 (35.71%)1200020000
GO:0044763single-organism cellular process5 (35.71%)1200010001
GO:0006351transcription, DNA-templated5 (35.71%)1200020000
GO:0048518positive regulation of biological process4 (28.57%)1200010000
GO:0044710single-organism metabolic process4 (28.57%)0000010102
GO:0007154cell communication3 (21.43%)1200000000
GO:0051716cellular response to stimulus3 (21.43%)1200000000
GO:0007623circadian rhythm3 (21.43%)1200000000
GO:0055114oxidation-reduction process3 (21.43%)0000000102
GO:0000160phosphorelay signal transduction system3 (21.43%)1200000000
GO:0042753positive regulation of circadian rhythm3 (21.43%)1200000000
GO:0019538protein metabolic process3 (21.43%)0001101000
GO:0042752regulation of circadian rhythm3 (21.43%)1200000000
GO:0048511rhythmic process3 (21.43%)1200000000
GO:0007165signal transduction3 (21.43%)1200000000
GO:0023052signaling3 (21.43%)1200000000
GO:0044700single organism signaling3 (21.43%)1200000000
GO:0044267cellular protein metabolic process2 (14.29%)0001100000
GO:0006091generation of precursor metabolites and energy2 (14.29%)0000010001
GO:0042221response to chemical2 (14.29%)0000020000
GO:0010033response to organic substance2 (14.29%)0000020000
GO:1901700response to oxygen-containing compound2 (14.29%)0000020000
GO:0046463acylglycerol biosynthetic process1 (7.14%)0000010000
GO:0006639acylglycerol metabolic process1 (7.14%)0000010000
GO:0048856anatomical structure development1 (7.14%)0100000000
GO:0016052carbohydrate catabolic process1 (7.14%)0000010000
GO:0005975carbohydrate metabolic process1 (7.14%)0000010000
GO:0009056catabolic process1 (7.14%)0000010000
GO:0006812cation transport1 (7.14%)0100000000
GO:0044275cellular carbohydrate catabolic process1 (7.14%)0000010000
GO:0044262cellular carbohydrate metabolic process1 (7.14%)0000010000
GO:0044248cellular catabolic process1 (7.14%)0000010000
GO:0044255cellular lipid metabolic process1 (7.14%)0000010000
GO:0006464cellular protein modification process1 (7.14%)0001000000
GO:0045333cellular respiration1 (7.14%)0000000001
GO:0010143cutin biosynthetic process1 (7.14%)0000010000
GO:0032502developmental process1 (7.14%)0100000000
GO:0003006developmental process involved in reproduction1 (7.14%)0100000000
GO:0015980energy derivation by oxidation of organic compounds1 (7.14%)0000000001
GO:0051234establishment of localization1 (7.14%)0100000000
GO:0009908flower development1 (7.14%)0100000000
GO:0006007glucose catabolic process1 (7.14%)0000010000
GO:0006006glucose metabolic process1 (7.14%)0000010000
GO:0045017glycerolipid biosynthetic process1 (7.14%)0000010000
GO:0046486glycerolipid metabolic process1 (7.14%)0000010000
GO:0006096glycolysis1 (7.14%)0000010000
GO:0019320hexose catabolic process1 (7.14%)0000010000
GO:0019318hexose metabolic process1 (7.14%)0000010000
GO:0006818hydrogen transport1 (7.14%)0100000000
GO:0006811ion transport1 (7.14%)0100000000
GO:0008610lipid biosynthetic process1 (7.14%)0000010000
GO:0006629lipid metabolic process1 (7.14%)0000010000
GO:0051179localization1 (7.14%)0100000000
GO:0043412macromolecule modification1 (7.14%)0001000000
GO:0046365monosaccharide catabolic process1 (7.14%)0000010000
GO:0005996monosaccharide metabolic process1 (7.14%)0000010000
GO:0015672monovalent inorganic cation transport1 (7.14%)0100000000
GO:0007275multicellular organismal development1 (7.14%)0100000000
GO:0032501multicellular organismal process1 (7.14%)0100000000
GO:0046460neutral lipid biosynthetic process1 (7.14%)0000010000
GO:0006638neutral lipid metabolic process1 (7.14%)0000010000
GO:1901575organic substance catabolic process1 (7.14%)0000010000
GO:0006796phosphate-containing compound metabolic process1 (7.14%)0001000000
GO:0006793phosphorus metabolic process1 (7.14%)0001000000
GO:0016310phosphorylation1 (7.14%)0001000000
GO:0009891positive regulation of biosynthetic process1 (7.14%)0000010000
GO:1901959positive regulation of cutin biosynthetic process1 (7.14%)0000010000
GO:0010557positive regulation of macromolecule biosynthetic process1 (7.14%)0000010000
GO:0010604positive regulation of macromolecule metabolic process1 (7.14%)0000010000
GO:0009893positive regulation of metabolic process1 (7.14%)0000010000
GO:0009791post-embryonic development1 (7.14%)0100000000
GO:0036211protein modification process1 (7.14%)0001000000
GO:0006468protein phosphorylation1 (7.14%)0001000000
GO:0006508proteolysis1 (7.14%)0000001000
GO:0015992proton transport1 (7.14%)0100000000
GO:0043470regulation of carbohydrate catabolic process1 (7.14%)0000010000
GO:0006109regulation of carbohydrate metabolic process1 (7.14%)0000010000
GO:0009894regulation of catabolic process1 (7.14%)0000010000
GO:0043471regulation of cellular carbohydrate catabolic process1 (7.14%)0000010000
GO:0010675regulation of cellular carbohydrate metabolic process1 (7.14%)0000010000
GO:0031329regulation of cellular catabolic process1 (7.14%)0000010000
GO:1901957regulation of cutin biosynthetic process1 (7.14%)0000010000
GO:0050793regulation of developmental process1 (7.14%)0100000000
GO:0009909regulation of flower development1 (7.14%)0100000000
GO:0043467regulation of generation of precursor metabolites and energy1 (7.14%)0000010000
GO:0010906regulation of glucose metabolic process1 (7.14%)0000010000
GO:0006110regulation of glycolysis1 (7.14%)0000010000
GO:2000026regulation of multicellular organismal development1 (7.14%)0100000000
GO:0051239regulation of multicellular organismal process1 (7.14%)0100000000
GO:0048580regulation of post-embryonic development1 (7.14%)0100000000
GO:2000241regulation of reproductive process1 (7.14%)0100000000
GO:0048831regulation of shoot system development1 (7.14%)0100000000
GO:0000003reproduction1 (7.14%)0100000000
GO:0022414reproductive process1 (7.14%)0100000000
GO:0048608reproductive structure development1 (7.14%)0100000000
GO:0061458reproductive system development1 (7.14%)0100000000
GO:0009628response to abiotic stimulus1 (7.14%)0000010000
GO:0009743response to carbohydrate1 (7.14%)0000010000
GO:0010200response to chitin1 (7.14%)0000010000
GO:0034285response to disaccharide1 (7.14%)0000010000
GO:0009719response to endogenous stimulus1 (7.14%)0000010000
GO:0009408response to heat1 (7.14%)0000010000
GO:1901698response to nitrogen compound1 (7.14%)0000010000
GO:0010243response to organonitrogen compound1 (7.14%)0000010000
GO:0006950response to stress1 (7.14%)0000010000
GO:0009744response to sucrose1 (7.14%)0000010000
GO:0009266response to temperature stimulus1 (7.14%)0000010000
GO:0048367shoot system development1 (7.14%)0100000000
GO:0044702single organism reproductive process1 (7.14%)0100000000
GO:0044707single-multicellular organism process1 (7.14%)0100000000
GO:0044711single-organism biosynthetic process1 (7.14%)0000010000
GO:0044724single-organism carbohydrate catabolic process1 (7.14%)0000010000
GO:0044723single-organism carbohydrate metabolic process1 (7.14%)0000010000
GO:0044712single-organism catabolic process1 (7.14%)0000010000
GO:0044767single-organism developmental process1 (7.14%)0100000000
GO:0044765single-organism transport1 (7.14%)0100000000
GO:0048731system development1 (7.14%)0100000000
GO:0006412translation1 (7.14%)0000100000
GO:0006810transport1 (7.14%)0100000000
GO:0019432triglyceride biosynthetic process1 (7.14%)0000010000
GO:0006641triglyceride metabolic process1 (7.14%)0000010000