Gene Ontology terms associated with a binding site

Binding site
Motif_553
Name
BOX2PSGS2
Description
Box 2 in glutamine synthetase (GS2) gene in pea; Repeated in tandem with a partial palindrome located between the repeats; Located at ca. -300 of pea GS2
#Associated genes
20
#Associated GO terms
167
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding8 (40.00%)0000103220
GO:0003824catalytic activity5 (25.00%)0010011110
GO:1901363heterocyclic compound binding5 (25.00%)0000001220
GO:0003676nucleic acid binding5 (25.00%)0000001220
GO:0097159organic cyclic compound binding5 (25.00%)0000001220
GO:0005515protein binding5 (25.00%)0000102110
GO:0003677DNA binding4 (20.00%)0000000220
GO:0043169cation binding3 (15.00%)0000100110
GO:0016787hydrolase activity3 (15.00%)0000010110
GO:0043167ion binding3 (15.00%)0000100110
GO:0046872metal ion binding3 (15.00%)0000100110
GO:1901265nucleoside phosphate binding3 (15.00%)0000001110
GO:0000166nucleotide binding3 (15.00%)0000001110
GO:0036094small molecule binding3 (15.00%)0000001110
GO:0046914transition metal ion binding3 (15.00%)0000100110
GO:0008270zinc ion binding3 (15.00%)0000100110
GO:0005524ATP binding2 (10.00%)0000000110
GO:0030554adenyl nucleotide binding2 (10.00%)0000000110
GO:0032559adenyl ribonucleotide binding2 (10.00%)0000000110
GO:0043168anion binding2 (10.00%)0000000110
GO:0097367carbohydrate derivative binding2 (10.00%)0000000110
GO:0003682chromatin binding2 (10.00%)0000000110
GO:0008092cytoskeletal protein binding2 (10.00%)0000101000
GO:0004386helicase activity2 (10.00%)0000000110
GO:0016817hydrolase activity, acting on acid anhydrides2 (10.00%)0000000110
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides2 (10.00%)0000000110
GO:0001882nucleoside binding2 (10.00%)0000000110
GO:0017111nucleoside-triphosphatase activity2 (10.00%)0000000110
GO:0032403protein complex binding2 (10.00%)0000101000
GO:0001883purine nucleoside binding2 (10.00%)0000000110
GO:0017076purine nucleotide binding2 (10.00%)0000000110
GO:0032550purine ribonucleoside binding2 (10.00%)0000000110
GO:0035639purine ribonucleoside triphosphate binding2 (10.00%)0000000110
GO:0032555purine ribonucleotide binding2 (10.00%)0000000110
GO:0016462pyrophosphatase activity2 (10.00%)0000000110
GO:0032549ribonucleoside binding2 (10.00%)0000000110
GO:0032553ribonucleotide binding2 (10.00%)0000000110
GO:0003723RNA binding1 (5.00%)0000001000
GO:0035251UDP-glucosyltransferase activity1 (5.00%)0000001000
GO:0008194UDP-glycosyltransferase activity1 (5.00%)0000001000
GO:0003779actin binding1 (5.00%)0000100000
GO:0051015actin filament binding1 (5.00%)0000100000
GO:0016760cellulose synthase (UDP-forming) activity1 (5.00%)0000001000
GO:0016759cellulose synthase activity1 (5.00%)0000001000
GO:0046527glucosyltransferase activity1 (5.00%)0000001000
GO:0016798hydrolase activity, acting on glycosyl bonds1 (5.00%)0000010000
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds1 (5.00%)0000010000
GO:0008017microtubule binding1 (5.00%)0000001000
GO:0016491oxidoreductase activity1 (5.00%)0010000000
GO:0016651oxidoreductase activity, acting on NAD(P)H1 (5.00%)0010000000
GO:0016667oxidoreductase activity, acting on a sulfur group of donors1 (5.00%)0010000000
GO:0016668oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor1 (5.00%)0010000000
GO:0047134protein-disulfide reductase activity1 (5.00%)0010000000
GO:0016740transferase activity1 (5.00%)0000001000
GO:0016757transferase activity, transferring glycosyl groups1 (5.00%)0000001000
GO:0016758transferase activity, transferring hexosyl groups1 (5.00%)0000001000
GO:0015631tubulin binding1 (5.00%)0000001000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process6 (30.00%)0010103100
GO:0044699single-organism process6 (30.00%)0010102110
GO:0008152metabolic process5 (25.00%)0010012100
GO:0071704organic substance metabolic process4 (20.00%)0000012100
GO:0044238primary metabolic process4 (20.00%)0000012100
GO:0044763single-organism cellular process4 (20.00%)0010102000
GO:0044260cellular macromolecule metabolic process3 (15.00%)0000002100
GO:0044237cellular metabolic process3 (15.00%)0000002100
GO:0032502developmental process3 (15.00%)0000001110
GO:0043170macromolecule metabolic process3 (15.00%)0000002100
GO:0007275multicellular organismal development3 (15.00%)0000001110
GO:0032501multicellular organismal process3 (15.00%)0000001110
GO:0044707single-multicellular organism process3 (15.00%)0000001110
GO:0044767single-organism developmental process3 (15.00%)0000001110
GO:0016070RNA metabolic process2 (10.00%)0000001100
GO:0048856anatomical structure development2 (10.00%)0000000110
GO:0009058biosynthetic process2 (10.00%)0000001100
GO:0005975carbohydrate metabolic process2 (10.00%)0000011000
GO:0006725cellular aromatic compound metabolic process2 (10.00%)0000001100
GO:0044249cellular biosynthetic process2 (10.00%)0000001100
GO:0044085cellular component biogenesis2 (10.00%)0000101000
GO:0016043cellular component organization2 (10.00%)0000101000
GO:0071840cellular component organization or biogenesis2 (10.00%)0000101000
GO:0034645cellular macromolecule biosynthetic process2 (10.00%)0000001100
GO:0034641cellular nitrogen compound metabolic process2 (10.00%)0000001100
GO:0007010cytoskeleton organization2 (10.00%)0000101000
GO:0009553embryo sac development2 (10.00%)0000000110
GO:0048229gametophyte development2 (10.00%)0000000110
GO:0010467gene expression2 (10.00%)0000001100
GO:0046483heterocycle metabolic process2 (10.00%)0000001100
GO:0009059macromolecule biosynthetic process2 (10.00%)0000001100
GO:0006807nitrogen compound metabolic process2 (10.00%)0000001100
GO:0090304nucleic acid metabolic process2 (10.00%)0000001100
GO:0006139nucleobase-containing compound metabolic process2 (10.00%)0000001100
GO:0006996organelle organization2 (10.00%)0000101000
GO:1901360organic cyclic compound metabolic process2 (10.00%)0000001100
GO:1901576organic substance biosynthetic process2 (10.00%)0000001100
GO:0044710single-organism metabolic process2 (10.00%)0010001000
GO:0032774RNA biosynthetic process1 (5.00%)0000000100
GO:0006396RNA processing1 (5.00%)0000001000
GO:0030036actin cytoskeleton organization1 (5.00%)0000100000
GO:0051017actin filament bundle assembly1 (5.00%)0000100000
GO:0061572actin filament bundle organization1 (5.00%)0000100000
GO:0007015actin filament organization1 (5.00%)0000100000
GO:0030029actin filament-based process1 (5.00%)0000100000
GO:0019438aromatic compound biosynthetic process1 (5.00%)0000000100
GO:0051274beta-glucan biosynthetic process1 (5.00%)0000001000
GO:0051273beta-glucan metabolic process1 (5.00%)0000001000
GO:0065007biological regulation1 (5.00%)0000000100
GO:0016051carbohydrate biosynthetic process1 (5.00%)0000001000
GO:0042546cell wall biogenesis1 (5.00%)0000001000
GO:0071554cell wall organization or biogenesis1 (5.00%)0000001000
GO:0034637cellular carbohydrate biosynthetic process1 (5.00%)0000001000
GO:0044262cellular carbohydrate metabolic process1 (5.00%)0000001000
GO:0022607cellular component assembly1 (5.00%)0000100000
GO:0006073cellular glucan metabolic process1 (5.00%)0000001000
GO:0044271cellular nitrogen compound biosynthetic process1 (5.00%)0000000100
GO:0033692cellular polysaccharide biosynthetic process1 (5.00%)0000001000
GO:0044264cellular polysaccharide metabolic process1 (5.00%)0000001000
GO:0030244cellulose biosynthetic process1 (5.00%)0000001000
GO:0030243cellulose metabolic process1 (5.00%)0000001000
GO:0009250glucan biosynthetic process1 (5.00%)0000001000
GO:0044042glucan metabolic process1 (5.00%)0000001000
GO:0018130heterocycle biosynthetic process1 (5.00%)0000000100
GO:0016071mRNA metabolic process1 (5.00%)0000001000
GO:0006397mRNA processing1 (5.00%)0000001000
GO:0043933macromolecular complex subunit organization1 (5.00%)0000100000
GO:0034654nucleobase-containing compound biosynthetic process1 (5.00%)0000000100
GO:1901362organic cyclic compound biosynthetic process1 (5.00%)0000000100
GO:0055114oxidation-reduction process1 (5.00%)0010000000
GO:0007389pattern specification process1 (5.00%)0000001000
GO:0009832plant-type cell wall biogenesis1 (5.00%)0000001000
GO:0071669plant-type cell wall organization or biogenesis1 (5.00%)0000001000
GO:0000271polysaccharide biosynthetic process1 (5.00%)0000001000
GO:0005976polysaccharide metabolic process1 (5.00%)0000001000
GO:0071822protein complex subunit organization1 (5.00%)0000100000
GO:0003002regionalization1 (5.00%)0000001000
GO:2001141regulation of RNA biosynthetic process1 (5.00%)0000000100
GO:0051252regulation of RNA metabolic process1 (5.00%)0000000100
GO:0050789regulation of biological process1 (5.00%)0000000100
GO:0009889regulation of biosynthetic process1 (5.00%)0000000100
GO:0031326regulation of cellular biosynthetic process1 (5.00%)0000000100
GO:2000112regulation of cellular macromolecule biosynthetic process1 (5.00%)0000000100
GO:0031323regulation of cellular metabolic process1 (5.00%)0000000100
GO:0050794regulation of cellular process1 (5.00%)0000000100
GO:0010468regulation of gene expression1 (5.00%)0000000100
GO:0010556regulation of macromolecule biosynthetic process1 (5.00%)0000000100
GO:0060255regulation of macromolecule metabolic process1 (5.00%)0000000100
GO:0019222regulation of metabolic process1 (5.00%)0000000100
GO:0051171regulation of nitrogen compound metabolic process1 (5.00%)0000000100
GO:0019219regulation of nucleobase-containing compound metabolic process1 (5.00%)0000000100
GO:0080090regulation of primary metabolic process1 (5.00%)0000000100
GO:0006355regulation of transcription, DNA-dependent1 (5.00%)0000000100
GO:0044711single-organism biosynthetic process1 (5.00%)0000001000
GO:0044723single-organism carbohydrate metabolic process1 (5.00%)0000001000
GO:0006351transcription, DNA-templated1 (5.00%)0000000100
GO:0010051xylem and phloem pattern formation1 (5.00%)0000001000

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell1 (5.00%)0000001000
GO:0044464cell part1 (5.00%)0000001000
GO:0005737cytoplasm1 (5.00%)0000001000
GO:0044444cytoplasmic part1 (5.00%)0000001000
GO:0005829cytosol1 (5.00%)0000001000
GO:0005622intracellular1 (5.00%)0000001000
GO:0043231intracellular membrane-bounded organelle1 (5.00%)0000001000
GO:0043229intracellular organelle1 (5.00%)0000001000
GO:0044424intracellular part1 (5.00%)0000001000
GO:0016020membrane1 (5.00%)0000001000
GO:0043227membrane-bounded organelle1 (5.00%)0000001000
GO:0005634nucleus1 (5.00%)0000001000
GO:0043226organelle1 (5.00%)0000001000