PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_524
Name: WRKY40;WRKY62;WRKY18
Description: Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis. Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Physical and functional interactions between pathogen-induced Arabidopsis WRKY18, WRKY40, and WRKY60 transcription factors

#Associated genes: 83
#Associated MapMan terms: 51

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	24 (28.92%)	0	2	3	3	6	4	3	3
27.3	RNA.regulation of transcription	24 (28.92%)	0	2	3	3	6	4	3	3
29	protein	11 (13.25%)	0	0	1	2	3	1	3	1
29.4	protein.postranslational modification	10 (12.05%)	0	0	1	2	3	1	2	1
29.4.1	protein.postranslational modification.kinase	7 (8.43%)	0	0	0	0	3	1	2	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	7 (8.43%)	0	0	0	0	3	1	2	1
30	signalling	6 (7.23%)	3	0	0	0	0	1	0	2
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	4 (4.82%)	0	1	0	0	2	1	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	4 (4.82%)	0	0	0	2	1	1	0	0
30.2	signalling.receptor kinases	4 (4.82%)	2	0	0	0	0	1	0	1
17	hormone metabolism	3 (3.61%)	0	1	0	0	1	0	0	1
26	misc	3 (3.61%)	0	0	1	1	0	1	0	0
34	transport	3 (3.61%)	0	1	1	0	0	0	1	0
17.5	hormone metabolism.ethylene	2 (2.41%)	0	1	0	0	1	0	0	0
20	stress	2 (2.41%)	1	0	0	0	0	0	1	0
20.2	stress.abiotic	2 (2.41%)	1	0	0	0	0	0	1	0
20.2.1	stress.abiotic.heat	2 (2.41%)	1	0	0	0	0	0	1	0
26.16	misc.myrosinases-lectin-jacalin	2 (2.41%)	0	0	1	0	0	1	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	2 (2.41%)	0	0	0	0	0	0	1	1
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	2 (2.41%)	0	0	0	0	2	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	2 (2.41%)	0	0	0	0	1	0	0	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	2 (2.41%)	0	0	0	0	0	2	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	2 (2.41%)	0	0	2	0	0	0	0	0
27.3.99	RNA.regulation of transcription.unclassified	2 (2.41%)	0	1	0	0	0	0	1	0
33	development	2 (2.41%)	0	1	0	0	1	0	0	0
33.99	development.unspecified	2 (2.41%)	0	1	0	0	1	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	2 (2.41%)	0	0	1	0	0	0	1	0
16	secondary metabolism	1 (1.20%)	0	0	0	1	0	0	0	0
16.10	secondary metabolism.simple phenols	1 (1.20%)	0	0	0	1	0	0	0	0
17.2	hormone metabolism.auxin	1 (1.20%)	0	0	0	0	0	0	0	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (1.20%)	0	0	0	0	0	0	0	1
17.5.2	hormone metabolism.ethylene.signal transduction	1 (1.20%)	0	0	0	0	1	0	0	0
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	1 (1.20%)	0	1	0	0	0	0	0	0
26.13	misc.acid and other phosphatases	1 (1.20%)	0	0	0	1	0	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (1.20%)	0	0	1	0	0	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	1 (1.20%)	0	0	0	1	0	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (1.20%)	0	0	0	0	0	0	1	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (1.20%)	0	0	0	0	0	0	0	1
28	DNA	1 (1.20%)	0	0	0	0	0	0	0	1
28.1	DNA.synthesis/chromatin structure	1 (1.20%)	0	0	0	0	0	0	0	1
29.2.1.1.2.1.7	protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S7	1 (1.20%)	1	0	0	0	0	0	0	0
29.6	protein.folding	1 (1.20%)	0	0	0	0	0	0	1	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	1 (1.20%)	0	0	0	0	0	1	0	0
30.2.2	signalling.receptor kinases.leucine rich repeat II	1 (1.20%)	1	0	0	0	0	0	0	0
30.2.20	signalling.receptor kinases.wheat LRK10 like	1 (1.20%)	1	0	0	0	0	0	0	0
30.2.3	signalling.receptor kinases.leucine rich repeat III	1 (1.20%)	0	0	0	0	0	0	0	1
30.3	signalling.calcium	1 (1.20%)	1	0	0	0	0	0	0	0
30.5	signalling.G-proteins	1 (1.20%)	0	0	0	0	0	0	0	1
31	cell	1 (1.20%)	0	0	0	0	1	0	0	0
31.1	cell.organisation	1 (1.20%)	0	0	0	0	1	0	0	0
34.14	transport.unspecified cations	1 (1.20%)	0	1	0	0	0	0	0	0