InterPro domains associated with a binding site
- Binding site
- Motif_523
- Name
- GATA-2;GATA-4;GATA-3;GATA-1
- Description
- Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics
- #Associated genes
- 20
- #Associated InterPro terms
- 22
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InterPro | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
---|---|---|---|---|---|---|---|---|---|---|---|---|
IPR003441 | NAC domain | 5 (25.00%) | 0 | 0 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 1 |
IPR028275 | Clustered mitochondria protein, N-terminal | 2 (10.00%) | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 |
IPR023231 | GSKIP domain | 2 (10.00%) | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 |
IPR000894 | Ribulose bisphosphate carboxylase small chain, domain | 2 (10.00%) | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
IPR024681 | Ribulose bisphosphate carboxylase, small chain | 2 (10.00%) | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
IPR024680 | Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal | 2 (10.00%) | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
IPR019734 | Tetratricopeptide repeat | 2 (10.00%) | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 |
IPR013026 | Tetratricopeptide repeat-containing domain | 2 (10.00%) | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 |
IPR011990 | Tetratricopeptide-like helical | 2 (10.00%) | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 |
IPR000008 | C2 domain | 1 (5.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
IPR003657 | DNA-binding WRKY | 1 (5.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
IPR005135 | Endonuclease/exonuclease/phosphatase | 1 (5.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
IPR009057 | Homeodomain-like | 1 (5.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
IPR006447 | Myb domain, plants | 1 (5.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
IPR001135 | NADH-quinone oxidoreductase, subunit D | 1 (5.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
IPR006568 | PSP, proline-rich | 1 (5.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
IPR018391 | Pyrrolo-quinoline quinone beta-propeller repeat | 1 (5.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
IPR027295 | Quinonprotein alcohol dehydrogenase-like domain | 1 (5.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
IPR011047 | Quinonprotein alcohol dehydrogenase-like superfamily | 1 (5.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
IPR008801 | Rapid ALkalinization Factor | 1 (5.00%) | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
IPR001005 | SANT/Myb domain | 1 (5.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
IPR001878 | Zinc finger, CCHC-type | 1 (5.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |