Gene Ontology terms associated with a binding site

Binding site
Motif_523
Name
GATA-2;GATA-4;GATA-3;GATA-1
Description
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics
#Associated genes
20
#Associated GO terms
282
 
Biological Process
Molecular Function
Cellular Component






Biological Process (back to top)

Click table-header(s) to enable sorting
GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process12 (60.00%)0201510012
GO:0008152metabolic process12 (60.00%)0201420012
GO:0044699single-organism process12 (60.00%)0201520002
GO:0044237cellular metabolic process11 (55.00%)0201410012
GO:0071704organic substance metabolic process10 (50.00%)0201410002
GO:0048856anatomical structure development8 (40.00%)0001410002
GO:0006725cellular aromatic compound metabolic process8 (40.00%)0001410002
GO:0034641cellular nitrogen compound metabolic process8 (40.00%)0001410002
GO:0032502developmental process8 (40.00%)0001410002
GO:0046483heterocycle metabolic process8 (40.00%)0001410002
GO:0043170macromolecule metabolic process8 (40.00%)0001410002
GO:0007275multicellular organismal development8 (40.00%)0001410002
GO:0032501multicellular organismal process8 (40.00%)0001410002
GO:0006807nitrogen compound metabolic process8 (40.00%)0001410002
GO:0090304nucleic acid metabolic process8 (40.00%)0001410002
GO:0006139nucleobase-containing compound metabolic process8 (40.00%)0001410002
GO:1901360organic cyclic compound metabolic process8 (40.00%)0001410002
GO:0044238primary metabolic process8 (40.00%)0001410002
GO:0044707single-multicellular organism process8 (40.00%)0001410002
GO:0044767single-organism developmental process8 (40.00%)0001410002
GO:0032774RNA biosynthetic process7 (35.00%)0001310002
GO:0016070RNA metabolic process7 (35.00%)0001310002
GO:0019438aromatic compound biosynthetic process7 (35.00%)0001310002
GO:0065007biological regulation7 (35.00%)0001310002
GO:0009058biosynthetic process7 (35.00%)0001310002
GO:0044249cellular biosynthetic process7 (35.00%)0001310002
GO:0034645cellular macromolecule biosynthetic process7 (35.00%)0001310002
GO:0044260cellular macromolecule metabolic process7 (35.00%)0001310002
GO:0044271cellular nitrogen compound biosynthetic process7 (35.00%)0001310002
GO:0003006developmental process involved in reproduction7 (35.00%)0001310002
GO:0010467gene expression7 (35.00%)0001310002
GO:0018130heterocycle biosynthetic process7 (35.00%)0001310002
GO:0009059macromolecule biosynthetic process7 (35.00%)0001310002
GO:0034654nucleobase-containing compound biosynthetic process7 (35.00%)0001310002
GO:1901362organic cyclic compound biosynthetic process7 (35.00%)0001310002
GO:1901576organic substance biosynthetic process7 (35.00%)0001310002
GO:2001141regulation of RNA biosynthetic process7 (35.00%)0001310002
GO:0051252regulation of RNA metabolic process7 (35.00%)0001310002
GO:0050789regulation of biological process7 (35.00%)0001310002
GO:0009889regulation of biosynthetic process7 (35.00%)0001310002
GO:0031326regulation of cellular biosynthetic process7 (35.00%)0001310002
GO:2000112regulation of cellular macromolecule biosynthetic process7 (35.00%)0001310002
GO:0031323regulation of cellular metabolic process7 (35.00%)0001310002
GO:0050794regulation of cellular process7 (35.00%)0001310002
GO:0010468regulation of gene expression7 (35.00%)0001310002
GO:0010556regulation of macromolecule biosynthetic process7 (35.00%)0001310002
GO:0060255regulation of macromolecule metabolic process7 (35.00%)0001310002
GO:0019222regulation of metabolic process7 (35.00%)0001310002
GO:0051171regulation of nitrogen compound metabolic process7 (35.00%)0001310002
GO:0019219regulation of nucleobase-containing compound metabolic process7 (35.00%)0001310002
GO:0080090regulation of primary metabolic process7 (35.00%)0001310002
GO:0006355regulation of transcription, DNA-dependent7 (35.00%)0001310002
GO:0000003reproduction7 (35.00%)0001310002
GO:0022414reproductive process7 (35.00%)0001310002
GO:0048731system development7 (35.00%)0001410001
GO:0006351transcription, DNA-templated7 (35.00%)0001310002
GO:0009790embryo development6 (30.00%)0001210002
GO:0048366leaf development6 (30.00%)0001310001
GO:0048513organ development6 (30.00%)0001310001
GO:0048827phyllome development6 (30.00%)0001310001
GO:0009791post-embryonic development6 (30.00%)0001310001
GO:0048608reproductive structure development6 (30.00%)0001310001
GO:0061458reproductive system development6 (30.00%)0001310001
GO:0048367shoot system development6 (30.00%)0001310001
GO:0048532anatomical structure arrangement5 (25.00%)0001210001
GO:0048646anatomical structure formation involved in morphogenesis5 (25.00%)0001210001
GO:0009653anatomical structure morphogenesis5 (25.00%)0001210001
GO:0009793embryo development ending in seed dormancy5 (25.00%)0001210001
GO:0048508embryonic meristem development5 (25.00%)0001210001
GO:0090421embryonic meristem initiation5 (25.00%)0001210001
GO:0048859formation of anatomical boundary5 (25.00%)0001210001
GO:0010160formation of organ boundary5 (25.00%)0001210001
GO:0010154fruit development5 (25.00%)0001210001
GO:0048507meristem development5 (25.00%)0001210001
GO:0010014meristem initiation5 (25.00%)0001210001
GO:0009933meristem structural organization5 (25.00%)0001210001
GO:0001763morphogenesis of a branching structure5 (25.00%)0001210001
GO:0048645organ formation5 (25.00%)0001210001
GO:0009887organ morphogenesis5 (25.00%)0001210001
GO:0007389pattern specification process5 (25.00%)0001210001
GO:0010072primary shoot apical meristem specification5 (25.00%)0001210001
GO:0003002regionalization5 (25.00%)0001210001
GO:0022603regulation of anatomical structure morphogenesis5 (25.00%)0001210001
GO:0040034regulation of development, heterochronic5 (25.00%)0001210001
GO:0050793regulation of developmental process5 (25.00%)0001210001
GO:2000026regulation of multicellular organismal development5 (25.00%)0001210001
GO:0051239regulation of multicellular organismal process5 (25.00%)0001210001
GO:0003156regulation of organ formation5 (25.00%)0001210001
GO:2000027regulation of organ morphogenesis5 (25.00%)0001210001
GO:0048504regulation of timing of organ formation5 (25.00%)0001210001
GO:0010223secondary shoot formation5 (25.00%)0001210001
GO:0048316seed development5 (25.00%)0001210001
GO:0010346shoot axis formation5 (25.00%)0001210001
GO:0010016shoot system morphogenesis5 (25.00%)0001210001
GO:0044702single organism reproductive process5 (25.00%)0001210001
GO:0009888tissue development5 (25.00%)0001210001
GO:0050896response to stimulus4 (20.00%)0200100001
GO:0015979photosynthesis3 (15.00%)0200000010
GO:0044710single-organism metabolic process3 (15.00%)0200010000
GO:0015977carbon fixation2 (10.00%)0200000000
GO:0044085cellular component biogenesis2 (10.00%)0200000000
GO:0071840cellular component organization or biogenesis2 (10.00%)0200000000
GO:0080158chloroplast ribulose bisphosphate carboxylase complex biogenesis2 (10.00%)0200000000
GO:0070271protein complex biogenesis2 (10.00%)0200000000
GO:0009628response to abiotic stimulus2 (10.00%)0200000000
GO:0009637response to blue light2 (10.00%)0200000000
GO:0042221response to chemical2 (10.00%)0000100001
GO:0009409response to cold2 (10.00%)0200000000
GO:0010218response to far red light2 (10.00%)0200000000
GO:0009416response to light stimulus2 (10.00%)0200000000
GO:0009314response to radiation2 (10.00%)0200000000
GO:0010114response to red light2 (10.00%)0200000000
GO:0009639response to red or far red light2 (10.00%)0200000000
GO:0006950response to stress2 (10.00%)0200000000
GO:0009266response to temperature stimulus2 (10.00%)0200000000
GO:0007568aging1 (5.00%)0000100000
GO:0051641cellular localization1 (5.00%)0000100000
GO:0070727cellular macromolecule localization1 (5.00%)0000100000
GO:0034613cellular protein localization1 (5.00%)0000100000
GO:0006935chemotaxis1 (5.00%)0000000001
GO:0016482cytoplasmic transport1 (5.00%)0000100000
GO:0051234establishment of localization1 (5.00%)0000100000
GO:0051649establishment of localization in cell1 (5.00%)0000100000
GO:0045184establishment of protein localization1 (5.00%)0000100000
GO:0072594establishment of protein localization to organelle1 (5.00%)0000100000
GO:0072666establishment of protein localization to vacuole1 (5.00%)0000100000
GO:0006886intracellular protein transport1 (5.00%)0000100000
GO:0046907intracellular transport1 (5.00%)0000100000
GO:0010150leaf senescence1 (5.00%)0000100000
GO:0051179localization1 (5.00%)0000100000
GO:0040011locomotion1 (5.00%)0000000001
GO:0033036macromolecule localization1 (5.00%)0000100000
GO:0044706multi-multicellular organism process1 (5.00%)0000000001
GO:0051704multi-organism process1 (5.00%)0000000001
GO:0044703multi-organism reproductive process1 (5.00%)0000000001
GO:0090305nucleic acid phosphodiester bond hydrolysis1 (5.00%)0000100000
GO:0010260organ senescence1 (5.00%)0000100000
GO:0071702organic substance transport1 (5.00%)0000100000
GO:0055114oxidation-reduction process1 (5.00%)0000010000
GO:0048868pollen tube development1 (5.00%)0000000001
GO:0010183pollen tube guidance1 (5.00%)0000000001
GO:0009856pollination1 (5.00%)0000000001
GO:0050918positive chemotaxis1 (5.00%)0000000001
GO:0008104protein localization1 (5.00%)0000100000
GO:0033365protein localization to organelle1 (5.00%)0000100000
GO:0072665protein localization to vacuole1 (5.00%)0000100000
GO:0006605protein targeting1 (5.00%)0000100000
GO:0006623protein targeting to vacuole1 (5.00%)0000100000
GO:0015031protein transport1 (5.00%)0000100000
GO:0010200response to chitin1 (5.00%)0000100000
GO:0009719response to endogenous stimulus1 (5.00%)0000100000
GO:0009605response to external stimulus1 (5.00%)0000000001
GO:1901698response to nitrogen compound1 (5.00%)0000100000
GO:0010033response to organic substance1 (5.00%)0000100000
GO:0010243response to organonitrogen compound1 (5.00%)0000100000
GO:1901700response to oxygen-containing compound1 (5.00%)0000100000
GO:0044763single-organism cellular process1 (5.00%)0000100000
GO:0044765single-organism transport1 (5.00%)0000100000
GO:0042330taxis1 (5.00%)0000000001
GO:0006810transport1 (5.00%)0000100000
GO:0007034vacuolar transport1 (5.00%)0000100000
GO:0010228vegetative to reproductive phase transition of meristem1 (5.00%)0000100000

Cellular Component (back to top)

Click table-header(s) to enable sorting
GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell7 (35.00%)0200200012
GO:0044464cell part7 (35.00%)0200200012
GO:0005622intracellular7 (35.00%)0200200012
GO:0044424intracellular part7 (35.00%)0200200012
GO:0016020membrane7 (35.00%)0200110012
GO:0005737cytoplasm5 (25.00%)0200200001
GO:0044444cytoplasmic part5 (25.00%)0200200001
GO:0043231intracellular membrane-bounded organelle5 (25.00%)0200100002
GO:0043229intracellular organelle5 (25.00%)0200100002
GO:0043227membrane-bounded organelle5 (25.00%)0200100002
GO:0043226organelle5 (25.00%)0200100002
GO:0071944cell periphery4 (20.00%)0200100001
GO:0005829cytosol3 (15.00%)0200100000
GO:0044446intracellular organelle part3 (15.00%)0200000001
GO:0032991macromolecular complex3 (15.00%)0200000010
GO:0044422organelle part3 (15.00%)0200000001
GO:0034357photosynthetic membrane3 (15.00%)0200000010
GO:0009579thylakoid3 (15.00%)0200000010
GO:0044436thylakoid part3 (15.00%)0200000010
GO:0048046apoplast2 (10.00%)0200000000
GO:0005618cell wall2 (10.00%)0200000000
GO:0009507chloroplast2 (10.00%)0200000000
GO:0009941chloroplast envelope2 (10.00%)0200000000
GO:0044434chloroplast part2 (10.00%)0200000000
GO:0009570chloroplast stroma2 (10.00%)0200000000
GO:0009534chloroplast thylakoid2 (10.00%)0200000000
GO:0009535chloroplast thylakoid membrane2 (10.00%)0200000000
GO:0044445cytosolic part2 (10.00%)0200000000
GO:0022626cytosolic ribosome2 (10.00%)0200000000
GO:0005783endoplasmic reticulum2 (10.00%)0000100001
GO:0031975envelope2 (10.00%)0200000000
GO:0030312external encapsulating structure2 (10.00%)0200000000
GO:0005576extracellular region2 (10.00%)0200000000
GO:0043232intracellular non-membrane-bounded organelle2 (10.00%)0200000000
GO:0043228non-membrane-bounded organelle2 (10.00%)0200000000
GO:0031967organelle envelope2 (10.00%)0200000000
GO:0031984organelle subcompartment2 (10.00%)0200000000
GO:0005886plasma membrane2 (10.00%)0000100001
GO:0009536plastid2 (10.00%)0200000000
GO:0009526plastid envelope2 (10.00%)0200000000
GO:0044435plastid part2 (10.00%)0200000000
GO:0009532plastid stroma2 (10.00%)0200000000
GO:0031976plastid thylakoid2 (10.00%)0200000000
GO:0055035plastid thylakoid membrane2 (10.00%)0200000000
GO:0030529ribonucleoprotein complex2 (10.00%)0200000000
GO:0005840ribosome2 (10.00%)0200000000
GO:0031977thylakoid lumen2 (10.00%)0200000000
GO:0042651thylakoid membrane2 (10.00%)0200000000
GO:0005773vacuole2 (10.00%)0000100001
GO:0005794Golgi apparatus1 (5.00%)0000000001
GO:0016021integral to membrane1 (5.00%)0000000010
GO:0031224intrinsic to membrane1 (5.00%)0000000010
GO:0044425membrane part1 (5.00%)0000000010
GO:0005634nucleus1 (5.00%)0000000001
GO:0031090organelle membrane1 (5.00%)0000000001
GO:0009521photosystem1 (5.00%)0000000010
GO:0009522photosystem I1 (5.00%)0000000010
GO:0000325plant-type vacuole1 (5.00%)0000100000
GO:0043234protein complex1 (5.00%)0000000010
GO:0000326protein storage vacuole1 (5.00%)0000100000
GO:0000322storage vacuole1 (5.00%)0000100000
GO:0005774vacuolar membrane1 (5.00%)0000000001
GO:0044437vacuolar part1 (5.00%)0000000001

Molecular Function (back to top)

Click table-header(s) to enable sorting
GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding14 (70.00%)0201530012
GO:1901363heterocyclic compound binding9 (45.00%)0001320012
GO:0097159organic cyclic compound binding9 (45.00%)0001320012
GO:0003676nucleic acid binding8 (40.00%)0001310012
GO:0003677DNA binding7 (35.00%)0001310011
GO:0003824catalytic activity6 (30.00%)0200110002
GO:0001071nucleic acid binding transcription factor activity6 (30.00%)0001310001
GO:0003700sequence-specific DNA binding transcription factor activity6 (30.00%)0001310001
GO:0005515protein binding4 (20.00%)0000210001
GO:0043169cation binding3 (15.00%)0200000001
GO:0043167ion binding3 (15.00%)0200000001
GO:0046872metal ion binding3 (15.00%)0200000001
GO:0046914transition metal ion binding3 (15.00%)0200000001
GO:0016830carbon-carbon lyase activity2 (10.00%)0200000000
GO:0016831carboxy-lyase activity2 (10.00%)0200000000
GO:0005507copper ion binding2 (10.00%)0200000000
GO:0016787hydrolase activity2 (10.00%)0000100001
GO:0016829lyase activity2 (10.00%)0200000000
GO:0016984ribulose-bisphosphate carboxylase activity2 (10.00%)0200000000
GO:00084083'-5' exonuclease activity1 (5.00%)0000100000
GO:00001753'-5'-exoribonuclease activity1 (5.00%)0000100000
GO:0008080N-acetyltransferase activity1 (5.00%)0000000001
GO:0016410N-acyltransferase activity1 (5.00%)0000000001
GO:0051287NAD binding1 (5.00%)0000010000
GO:0016407acetyltransferase activity1 (5.00%)0000000001
GO:0003682chromatin binding1 (5.00%)0000000010
GO:0050662coenzyme binding1 (5.00%)0000010000
GO:0048037cofactor binding1 (5.00%)0000010000
GO:0004527exonuclease activity1 (5.00%)0000100000
GO:0016796exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters1 (5.00%)0000100000
GO:0004532exoribonuclease activity1 (5.00%)0000100000
GO:0016896exoribonuclease activity, producing 5'-phosphomonoesters1 (5.00%)0000100000
GO:0004402histone acetyltransferase activity1 (5.00%)0000000001
GO:0016817hydrolase activity, acting on acid anhydrides1 (5.00%)0000000001
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides1 (5.00%)0000000001
GO:0016788hydrolase activity, acting on ester bonds1 (5.00%)0000100000
GO:0004427inorganic diphosphatase activity1 (5.00%)0000000001
GO:0060089molecular transducer activity1 (5.00%)0010000000
GO:0004518nuclease activity1 (5.00%)0000100000
GO:1901265nucleoside phosphate binding1 (5.00%)0000010000
GO:0000166nucleotide binding1 (5.00%)0000010000
GO:0016491oxidoreductase activity1 (5.00%)0000010000
GO:0016651oxidoreductase activity, acting on NAD(P)H1 (5.00%)0000010000
GO:0004535poly(A)-specific ribonuclease activity1 (5.00%)0000100000
GO:0000988protein binding transcription factor activity1 (5.00%)0000000001
GO:0016462pyrophosphatase activity1 (5.00%)0000000001
GO:0048038quinone binding1 (5.00%)0000010000
GO:0004540ribonuclease activity1 (5.00%)0000100000
GO:0043565sequence-specific DNA binding1 (5.00%)0000100000
GO:0004871signal transducer activity1 (5.00%)0010000000
GO:0036094small molecule binding1 (5.00%)0000010000
GO:0003712transcription cofactor activity1 (5.00%)0000000001
GO:0000989transcription factor binding transcription factor activity1 (5.00%)0000000001
GO:0016740transferase activity1 (5.00%)0000000001
GO:0016746transferase activity, transferring acyl groups1 (5.00%)0000000001
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups1 (5.00%)0000000001
GO:0008270zinc ion binding1 (5.00%)0000000001