InterPro domains associated with a binding site

Binding site
Motif_518
Name
SPHCOREZMC1
Description
Core of Sph element; Core motif of Sph element in maize C1 gene to which maize VP1 (viviparous 1) protein binds; VP1-responsive element; see RYREPEAT4; VP1 gene is specifically required for expression of the maturation program in seed development; VP1 is a novel transcription factor possibly involved in potentiation of a seed-specific hormone response
#Associated genes
238
#Associated InterPro terms
221

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InterPro Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
IPR007087Zinc finger, C2H233 (13.87%)14221141332
IPR015880Zinc finger, C2H2-like29 (12.18%)1422841331
IPR013087Zinc finger C2H2-type/integrase DNA-binding domain24 (10.08%)1412720232
IPR009057Homeodomain-like18 (7.56%)0002531124
IPR001005SANT/Myb domain13 (5.46%)0001321123
IPR016024Armadillo-type fold10 (4.20%)1010112121
IPR017930Myb domain10 (4.20%)0001210123
IPR006447Myb domain, plants10 (4.20%)0000320122
IPR027417P-loop containing nucleoside triphosphate hydrolase10 (4.20%)0110500111
IPR011989Armadillo-like helical8 (3.36%)1010011121
IPR000719Protein kinase domain8 (3.36%)0110312000
IPR011009Protein kinase-like domain8 (3.36%)0110312000
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain8 (3.36%)0110312000
IPR008271Serine/threonine-protein kinase, active site8 (3.36%)0110312000
IPR010285DNA helicase Pif17 (2.94%)0000500110
IPR023271Aquaporin-like6 (2.52%)1201110000
IPR006553Leucine-rich repeat, cysteine-containing subtype6 (2.52%)0000310110
IPR000425Major intrinsic protein6 (2.52%)1201110000
IPR022357Major intrinsic protein, conserved site6 (2.52%)1201110000
IPR003851Zinc finger, Dof-type6 (2.52%)0010011111
IPR001356Homeobox domain5 (2.10%)0001210001
IPR001611Leucine-rich repeat5 (2.10%)0100220000
IPR001313Pumilio RNA-binding repeat5 (2.10%)1010011010
IPR003311AUX/IAA protein4 (1.68%)0000211000
IPR011525Aux/IAA-ARF-dimerisation4 (1.68%)0000211000
IPR013320Concanavalin A-like lectin/glucanase, subgroup4 (1.68%)0010201000
IPR006045Cupin 14 (1.68%)0010101001
IPR001810F-box domain4 (1.68%)0000310000
IPR003591Leucine-rich repeat, typical subtype4 (1.68%)0100120000
IPR013210Leucine-rich repeat-containing N-terminal, type 24 (1.68%)0100210000
IPR016040NAD(P)-binding domain4 (1.68%)0010011001
IPR017441Protein kinase, ATP binding site4 (1.68%)0110110000
IPR011051RmlC-like cupin domain4 (1.68%)0010101001
IPR014710RmlC-like jelly roll fold4 (1.68%)0010101001
IPR004839Aminotransferase, class I/classII3 (1.26%)1000011000
IPR014733Barwin-like endoglucanase3 (1.26%)0000300000
IPR003840DNA helicase3 (1.26%)0000300000
IPR007117Expansin, cellulose-binding-like domain3 (1.26%)0000300000
IPR007112Expansin/pollen allergen, DPBB domain3 (1.26%)0000300000
IPR004993GH3 auxin-responsive promoter3 (1.26%)0001200000
IPR009071High mobility group box domain3 (1.26%)0000002100
IPR027443Isopenicillin N synthase-like3 (1.26%)0000012000
IPR019942LL-diaminopimelate aminotransferase, plants and Chlamydia type3 (1.26%)1000011000
IPR003441NAC domain3 (1.26%)0100200000
IPR026992Non-haem dioxygenase N-terminal domain3 (1.26%)0000012000
IPR005123Oxoglutarate/iron-dependent dioxygenase3 (1.26%)0000012000
IPR012334Pectin lyase fold3 (1.26%)0000300000
IPR011050Pectin lyase fold/virulence factor3 (1.26%)0000300000
IPR002123Phospholipid/glycerol acyltransferase3 (1.26%)0011100000
IPR015655Protein phosphatase 2C3 (1.26%)0000011001
IPR001932Protein phosphatase 2C (PP2C)-like domain3 (1.26%)0000011001
IPR000222Protein phosphatase 2C, manganese/magnesium aspartate binding site3 (1.26%)0000011001
IPR015424Pyridoxal phosphate-dependent transferase3 (1.26%)1000011000
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 13 (1.26%)1000011000
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 23 (1.26%)1000011000
IPR009009RlpA-like double-psi beta-barrel domain3 (1.26%)0000300000
IPR000872Tafazzin3 (1.26%)0011100000
IPR005202Transcription factor GRAS3 (1.26%)0100010001
IPR006780YABBY protein3 (1.26%)0000002100
IPR013083Zinc finger, RING/FYVE/PHD-type3 (1.26%)0000120000
IPR0268991,3-beta-glucan synthase subunit FKS1-like, domain-12 (0.84%)0000001001
IPR003593AAA+ ATPase domain2 (0.84%)0100000001
IPR020966Aluminum-activated malate transporter2 (0.84%)0000101000
IPR004827Basic-leucine zipper domain2 (0.84%)0001001000
IPR026953Callose synthase2 (0.84%)0000001001
IPR003657DNA-binding WRKY2 (0.84%)0000011000
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal2 (0.84%)0100000001
IPR006936Domain of unknown function DUF6402 (0.84%)0010100000
IPR005135Endonuclease/exonuclease/phosphatase2 (0.84%)0000010001
IPR007118Expansin/Lol pI2 (0.84%)0000200000
IPR004182GRAM domain2 (0.84%)2000000000
IPR007123Gelsolin domain2 (0.84%)0000200000
IPR002902Gnk2-homologous domain2 (0.84%)0010100000
IPR001650Helicase, C-terminal2 (0.84%)0100000001
IPR014001Helicase, superfamily 1/2, ATP-binding domain2 (0.84%)0100000001
IPR009072Histone-fold2 (0.84%)0000020000
IPR017970Homeobox, conserved site2 (0.84%)0000200000
IPR014756Immunoglobulin E-set2 (0.84%)0100000001
IPR027140Importin subunit beta2 (0.84%)0000000110
IPR001494Importin-beta, N-terminal domain2 (0.84%)0000000110
IPR001509NAD-dependent epimerase/dehydratase2 (0.84%)0000011000
IPR008089Nucleotide sugar epimerase2 (0.84%)0000011000
IPR006501Pectinesterase inhibitor domain2 (0.84%)0000200000
IPR018040Pectinesterase, active site2 (0.84%)0000200000
IPR000070Pectinesterase, catalytic2 (0.84%)0000200000
IPR011993Pleckstrin homology-like domain2 (0.84%)2000000000
IPR010686Protein of unknown function DUF12642 (0.84%)0000100001
IPR010820Protein of unknown function DUF14212 (0.84%)0000200000
IPR012866Protein of unknown function DUF16442 (0.84%)0000020000
IPR002554Protein phosphatase 2A, regulatory B subunit, B562 (0.84%)0000101000
IPR002913START domain2 (0.84%)0000200000
IPR004179Sec63 domain2 (0.84%)0100000001
IPR019389Selenoprotein T2 (0.84%)0000011000
IPR011893Selenoprotein, Rdx type2 (0.84%)0000011000
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain2 (0.84%)0010001000
IPR012336Thioredoxin-like fold2 (0.84%)0000011000
IPR003958Transcription factor CBF/NF-Y/archaeal histone2 (0.84%)0000020000
IPR017887Transcription factor TCP subgroup2 (0.84%)0000020000
IPR003957Transcription factor, NFYB/HAP3 subunit2 (0.84%)0000020000
IPR003956Transcription factor, NFYB/HAP3, conserved site2 (0.84%)0000020000
IPR005333Transcription factor, TCP2 (0.84%)0000020000
IPR025308UDP-glucose 4-epimerase C-terminal domain2 (0.84%)0000011000
IPR005886UDP-glucose 4-epimerase GalE2 (0.84%)0000011000
IPR003128Villin headpiece2 (0.84%)0000200000
IPR007122Villin/Gelsolin2 (0.84%)0000200000
IPR006642Zinc finger, Rad18-type putative2 (0.84%)0000200000
IPR001876Zinc finger, RanBP2-type2 (0.84%)0001001000
IPR022775AP complex, mu/sigma subunit1 (0.42%)0100000000
IPR001471AP2/ERF domain1 (0.42%)0000100000
IPR013785Aldolase-type TIM barrel1 (0.42%)0010000000
IPR018082AmbAllergen1 (0.42%)0000100000
IPR004838Aminotransferases, class-I, pyridoxal-phosphate-binding site1 (0.42%)0000010000
IPR001357BRCT domain1 (0.42%)0000100000
IPR011333BTB/POZ fold1 (0.42%)0000001000
IPR008540BZR1, transcriptional repressor1 (0.42%)0000010000
IPR008264Beta-glucanase1 (0.42%)0000100000
IPR005172CRC domain1 (0.42%)0000001000
IPR006633Carbohydrate-binding/sugar hydrolysis domain1 (0.42%)0000100000
IPR003010Carbon-nitrogen hydrolase1 (0.42%)1000000000
IPR006153Cation/H+ exchanger1 (0.42%)0000001000
IPR008985Concanavalin A-like lectin/glucanases superfamily1 (0.42%)0000100000
IPR008972Cupredoxin1 (0.42%)0000100000
IPR004367Cyclin, C-terminal domain1 (0.42%)0000100000
IPR006671Cyclin, N-terminal1 (0.42%)0000100000
IPR013763Cyclin-like1 (0.42%)0000100000
IPR016177DNA-binding domain1 (0.42%)0000100000
IPR011008Dimeric alpha-beta barrel1 (0.42%)0000001000
IPR025114Domain of unknown function DUF40331 (0.42%)0000001000
IPR011430Down-regulated-in-metastasis protein1 (0.42%)0000000001
IPR009022Elongation factor G, III-V domain1 (0.42%)0000100000
IPR019542Enhancer of polycomb-like, N-terminal1 (0.42%)0010000000
IPR006055Exonuclease1 (0.42%)0000010000
IPR013520Exonuclease, RNase T/DNA polymerase III1 (0.42%)0000010000
IPR000741Fructose-bisphosphate aldolase, class-I1 (0.42%)0010000000
IPR019378GDP-fucose protein O-fucosyltransferase1 (0.42%)0000001000
IPR008979Galactose-binding domain-like1 (0.42%)0010000000
IPR003854Gibberellin regulated protein1 (0.42%)0001000000
IPR002347Glucose/ribitol dehydrogenase1 (0.42%)0000000001
IPR013781Glycoside hydrolase, catalytic domain1 (0.42%)0000000100
IPR001360Glycoside hydrolase, family 11 (0.42%)0000000100
IPR018120Glycoside hydrolase, family 1, active site1 (0.42%)0000000100
IPR000757Glycoside hydrolase, family 161 (0.42%)0000100000
IPR008263Glycoside hydrolase, family 16, active site1 (0.42%)0000100000
IPR001701Glycoside hydrolase, family 91 (0.42%)0000100000
IPR018221Glycoside hydrolase, family 9, active site1 (0.42%)0000100000
IPR017853Glycoside hydrolase, superfamily1 (0.42%)0000000100
IPR003440Glycosyl transferase, family 481 (0.42%)0000000001
IPR023214HAD-like domain1 (0.42%)0000010000
IPR008380HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase1 (0.42%)0000010000
IPR006121Heavy metal-associated domain, HMA1 (0.42%)0000100000
IPR025476Helitron helicase-like domain1 (0.42%)0000100000
IPR000300Inositol polyphosphate-related phosphatase1 (0.42%)0000010000
IPR006652Kelch repeat type 11 (0.42%)0000010000
IPR015915Kelch-type beta propeller1 (0.42%)0000010000
IPR006511Lateral Root Primordium type 1, C-terminal1 (0.42%)0000000001
IPR004883Lateral organ boundaries, LOB1 (0.42%)0100000000
IPR025875Leucine rich repeat 41 (0.42%)0100000000
IPR001087Lipase, GDSL1 (0.42%)0000010000
IPR011012Longin-like domain1 (0.42%)0100000000
IPR025756MYB-CC type transcription factor, LHEQLE-containing domain1 (0.42%)0000000001
IPR000347Metallothionein, family 15, plant1 (0.42%)0000001000
IPR009768Microtubule-associated protein 701 (0.42%)0000100000
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain1 (0.42%)0000001000
IPR002587Myo-inositol-1-phosphate synthase1 (0.42%)0010000000
IPR013021Myo-inositol-1-phosphate synthase, GAPDH-like1 (0.42%)0010000000
IPR019654NAD(P)H-quinone oxidoreductase subunit L1 (0.42%)0000001000
IPR027356NPH3 domain1 (0.42%)0000001000
IPR000132Nitrilase/cyanide hydratase, conserved site1 (0.42%)1000000000
IPR012677Nucleotide-binding, alpha-beta plait1 (0.42%)0001000000
IPR002935O-methyltransferase, family 31 (0.42%)0000100000
IPR000136Oleosin1 (0.42%)0000000010
IPR026057PC-Esterase1 (0.42%)0000100000
IPR025846PMR5 N-terminal domain1 (0.42%)0000100000
IPR007524Pectate lyase, N-terminal1 (0.42%)0000100000
IPR002022Pectate lyase/Amb allergen1 (0.42%)0000100000
IPR002885Pentatricopeptide repeat1 (0.42%)0000100000
IPR023828Peptidase S8, subtilisin, Ser-active site1 (0.42%)0000010000
IPR015500Peptidase S8, subtilisin-related1 (0.42%)0000010000
IPR000209Peptidase S8/S53 domain1 (0.42%)0000010000
IPR025886Phloem protein 2-like1 (0.42%)0000010000
IPR006083Phosphoribulokinase/uridine kinase1 (0.42%)0010000000
IPR003137Protease-associated domain, PA1 (0.42%)0000010000
IPR012862Protein of unknown function DUF16351 (0.42%)0100000000
IPR012870Protein of unknown function DUF16661 (0.42%)0000010000
IPR006873Protein of unknown function DUF6201 (0.42%)0000000001
IPR006946Protein of unknown function DUF6421 (0.42%)0010000000
IPR007818Protein of unknown function DUF7021 (0.42%)0000000001
IPR008586Protein of unknown function DUF868, plant1 (0.42%)0000000001
IPR010259Proteinase inhibitor I91 (0.42%)0000010000
IPR004159Putative S-adenosyl-L-methionine-dependent methyltransferase1 (0.42%)0000000001
IPR000504RNA recognition motif domain1 (0.42%)0001000000
IPR003035RWP-RK domain1 (0.42%)0000010000
IPR012337Ribonuclease H-like domain1 (0.42%)0000010000
IPR008195Ribosomal protein L34Ae1 (0.42%)0000010000
IPR009771Ribosome control protein 11 (0.42%)0000001000
IPR014729Rossmann-like alpha/beta/alpha sandwich fold1 (0.42%)0000001000
IPR013831SGNH hydrolase-type esterase domain1 (0.42%)0000010000
IPR006597Sel1-like1 (0.42%)0000010000
IPR002198Short-chain dehydrogenase/reductase SDR1 (0.42%)0000000001
IPR012341Six-hairpin glycosidase1 (0.42%)0000100000
IPR008928Six-hairpin glycosidase-like1 (0.42%)0000100000
IPR013097Stress responsive alpha-beta barrel1 (0.42%)0000001000
IPR011990Tetratricopeptide-like helical1 (0.42%)0000010000
IPR025610Transcription factor MYC/MYB N-terminal1 (0.42%)0000001000
IPR025422Transcription factor TGA like domain1 (0.42%)0000001000
IPR000640Translation elongation factor EFG, V domain1 (0.42%)0000100000
IPR009000Translation protein, beta-barrel domain1 (0.42%)0000100000
IPR002999Tudor domain1 (0.42%)0010000000
IPR008896Uncharacterised protein family Ycf11 (0.42%)0000000100
IPR000764Uridine kinase1 (0.42%)0010000000
IPR026008Uridine kinase-like protein1 (0.42%)0010000000
IPR006016UspA1 (0.42%)0000001000
IPR015943WD40/YVTN repeat-like-containing domain1 (0.42%)0000001000
IPR010713Xyloglucan endo-transglycosylase, C-terminal1 (0.42%)0000100000
IPR003656Zinc finger, BED-type predicted1 (0.42%)0000001000
IPR010666Zinc finger, GRF-type1 (0.42%)0000010000
IPR002893Zinc finger, MYND-type1 (0.42%)0000010000
IPR001965Zinc finger, PHD-type1 (0.42%)0000100000
IPR001841Zinc finger, RING-type1 (0.42%)0000100000
IPR017907Zinc finger, RING-type, conserved site1 (0.42%)0000100000
IPR006510Zinc finger, lateral root primordium type 11 (0.42%)0000000001