PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_497
Name: ARE1
Description: ARE (antioxidant response element); antioxidant response element of rat glutathione S-transferase Ya subunit, and rat NAD(P)H:quinone reductase genes

#Associated genes: 362
#Associated MapMan terms: 161

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	88 (24.31%)	2	8	8	30	16	10	3	11
27.3	RNA.regulation of transcription	82 (22.65%)	2	8	7	30	13	10	3	9
29	protein	22 (6.08%)	0	2	3	5	3	3	0	6
31	cell	21 (5.80%)	1	1	3	4	3	5	1	3
28	DNA	16 (4.42%)	0	1	4	3	1	2	2	3
28.1	DNA.synthesis/chromatin structure	16 (4.42%)	0	1	4	3	1	2	2	3
30	signalling	16 (4.42%)	1	2	3	5	3	0	0	2
33	development	15 (4.14%)	2	1	1	4	3	1	0	3
33.99	development.unspecified	15 (4.14%)	2	1	1	4	3	1	0	3
29.4	protein.postranslational modification	14 (3.87%)	0	2	2	4	2	2	0	2
31.1	cell.organisation	12 (3.31%)	1	1	1	3	2	2	0	2
28.1.3	DNA.synthesis/chromatin structure.histone	11 (3.04%)	0	1	3	3	0	1	1	2
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	10 (2.76%)	0	0	2	5	1	1	1	0
27.3.99	RNA.regulation of transcription.unclassified	9 (2.49%)	0	1	1	4	1	1	0	1
34	transport	9 (2.49%)	0	0	2	0	5	1	0	1
29.4.1	protein.postranslational modification.kinase	8 (2.21%)	0	1	1	2	1	1	0	2
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	8 (2.21%)	0	1	1	2	1	1	0	2
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	8 (2.21%)	1	1	0	2	2	2	0	0
17	hormone metabolism	7 (1.93%)	1	3	1	1	0	1	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	7 (1.93%)	0	0	0	4	2	0	0	1
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	7 (1.93%)	1	2	0	0	2	1	0	1
26	misc	6 (1.66%)	0	0	1	1	2	1	0	1
31.4	cell.vesicle transport	6 (1.66%)	0	0	1	1	1	1	1	1
10	cell wall	5 (1.38%)	1	1	0	3	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	5 (1.38%)	0	0	1	0	2	1	0	1
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	5 (1.38%)	0	2	0	3	0	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	5 (1.38%)	1	3	0	0	0	0	0	1
30.3	signalling.calcium	5 (1.38%)	0	1	1	2	0	0	0	1
11	lipid metabolism	4 (1.10%)	0	0	1	1	2	0	0	0
13	amino acid metabolism	4 (1.10%)	0	0	0	1	2	1	0	0
13.2	amino acid metabolism.degradation	4 (1.10%)	0	0	0	1	2	1	0	0
13.2.5	amino acid metabolism.degradation.serine-glycine-cysteine group	4 (1.10%)	0	0	0	1	2	1	0	0
13.2.5.2	amino acid metabolism.degradation.serine-glycine-cysteine group.glycine	4 (1.10%)	0	0	0	1	2	1	0	0
20	stress	4 (1.10%)	0	0	0	0	1	1	1	1
22	polyamine metabolism	4 (1.10%)	0	0	0	3	0	0	1	0
22.1	polyamine metabolism.synthesis	4 (1.10%)	0	0	0	3	0	0	1	0
22.1.2	polyamine metabolism.synthesis.SAM decarboxylase	4 (1.10%)	0	0	0	3	0	0	1	0
27.3.14	RNA.regulation of transcription.CCAAT box binding factor family, HAP2	4 (1.10%)	0	0	0	4	0	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	4 (1.10%)	0	0	0	2	1	0	1	0
27.4	RNA.RNA binding	4 (1.10%)	0	0	1	0	2	0	0	1
1	PS	3 (0.83%)	0	0	2	1	0	0	0	0
1.1	PS.lightreaction	3 (0.83%)	0	0	2	1	0	0	0	0
3	minor CHO metabolism	3 (0.83%)	0	0	0	2	0	0	0	1
10.6	cell wall.degradation	3 (0.83%)	1	1	0	1	0	0	0	0
11.9	lipid metabolism.lipid degradation	3 (0.83%)	0	0	1	0	2	0	0	0
15	metal handling	3 (0.83%)	0	0	0	1	2	0	0	0
15.2	metal handling.binding, chelation and storage	3 (0.83%)	0	0	0	1	2	0	0	0
16	secondary metabolism	3 (0.83%)	0	1	0	0	0	1	0	1
17.1	hormone metabolism.abscisic acid	3 (0.83%)	0	1	1	0	0	1	0	0
19	tetrapyrrole synthesis	3 (0.83%)	0	0	0	2	1	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	3 (0.83%)	0	0	0	2	0	0	0	1
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	3 (0.83%)	0	1	0	0	1	1	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	3 (0.83%)	0	0	0	1	0	1	0	1
27.3.67	RNA.regulation of transcription.putative transcription regulator	3 (0.83%)	1	0	2	0	0	0	0	0
29.5	protein.degradation	3 (0.83%)	0	0	0	0	1	0	0	2
29.5.11	protein.degradation.ubiquitin	3 (0.83%)	0	0	0	0	1	0	0	2
30.1	signalling.in sugar and nutrient physiology	3 (0.83%)	0	0	2	0	1	0	0	0
31.2	cell.division	3 (0.83%)	0	0	1	0	0	2	0	0
34.18	transport.unspecified anions	3 (0.83%)	0	0	0	0	2	0	0	1
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	2 (0.55%)	1	1	0	0	0	0	0	0
10.7	cell wall.modification	2 (0.55%)	0	0	0	2	0	0	0	0
11.9.4	lipid metabolism.lipid degradation.beta-oxidation	2 (0.55%)	0	0	1	0	1	0	0	0
16.1	secondary metabolism.isoprenoids	2 (0.55%)	0	1	0	0	0	1	0	0
16.1.1	secondary metabolism.isoprenoids.non-mevalonate pathway	2 (0.55%)	0	1	0	0	0	1	0	0
16.1.1.1	secondary metabolism.isoprenoids.non-mevalonate pathway.DXS	2 (0.55%)	0	1	0	0	0	1	0	0
17.1.2	hormone metabolism.abscisic acid.signal transduction	2 (0.55%)	0	1	0	0	0	1	0	0
19.7	tetrapyrrole synthesis.uroporphyrinogen decarboxylase	2 (0.55%)	0	0	0	2	0	0	0	0
20.1	stress.biotic	2 (0.55%)	0	0	0	0	1	1	0	0
20.2	stress.abiotic	2 (0.55%)	0	0	0	0	0	0	1	1
26.12	misc.peroxidases	2 (0.55%)	0	0	0	0	1	0	0	1
26.13	misc.acid and other phosphatases	2 (0.55%)	0	0	1	0	0	1	0	0
27.2	RNA.transcription	2 (0.55%)	0	0	0	0	1	0	0	1
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	2 (0.55%)	0	1	0	0	0	1	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	2 (0.55%)	0	0	0	0	1	1	0	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	2 (0.55%)	0	0	0	1	1	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	2 (0.55%)	0	0	0	0	0	1	0	1
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	2 (0.55%)	0	0	0	0	1	1	0	0
27.3.65	RNA.regulation of transcription.Polycomb Group (PcG)	2 (0.55%)	0	0	0	1	0	1	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	2 (0.55%)	0	0	0	2	0	0	0	0
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	2 (0.55%)	0	0	0	1	0	1	0	0
28.1.3.2.3	DNA.synthesis/chromatin structure.histone.core.H3	2 (0.55%)	0	0	0	1	0	1	0	0
3.4	minor CHO metabolism.myo-inositol	2 (0.55%)	0	0	0	2	0	0	0	0
29.3	protein.targeting	2 (0.55%)	0	0	0	1	0	1	0	0
29.7	protein.glycosylation	2 (0.55%)	0	0	0	0	0	0	0	2
3.4.4	minor CHO metabolism.myo-inositol.myo inositol oxygenases	2 (0.55%)	0	0	0	2	0	0	0	0
30.4	signalling.phosphinositides	2 (0.55%)	0	1	0	0	0	0	0	1
30.5	signalling.G-proteins	2 (0.55%)	0	0	0	2	0	0	0	0
34.3	transport.amino acids	2 (0.55%)	0	0	0	0	2	0	0	0
1.1.1	PS.lightreaction.photosystem II	1 (0.28%)	0	0	1	0	0	0	0	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	1 (0.28%)	0	0	1	0	0	0	0	0
1.1.3	PS.lightreaction.cytochrome b6/f	1 (0.28%)	0	0	1	0	0	0	0	0
1.1.3.4	PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)	1 (0.28%)	0	0	1	0	0	0	0	0
1.1.5	PS.lightreaction.other electron carrier (ox/red)	1 (0.28%)	0	0	0	1	0	0	0	0
1.1.5.2	PS.lightreaction.other electron carrier (ox/red).ferredoxin	1 (0.28%)	0	0	0	1	0	0	0	0
2	major CHO metabolism	1 (0.28%)	0	0	0	1	0	0	0	0
4	glycolysis	1 (0.28%)	0	0	0	0	0	1	0	0
6	gluconeogenesis / glyoxylate cycle	1 (0.28%)	0	0	0	1	0	0	0	0
8	TCA / org transformation	1 (0.28%)	0	0	0	0	0	0	0	1
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases	1 (0.28%)	0	0	0	1	0	0	0	0
11.1	lipid metabolism.FA synthesis and FA elongation	1 (0.28%)	0	0	0	1	0	0	0	0
11.1.8	lipid metabolism.FA synthesis and FA elongation.acyl coa ligase	1 (0.28%)	0	0	0	1	0	0	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	1 (0.28%)	0	0	0	0	1	0	0	0
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	1 (0.28%)	0	0	0	0	1	0	0	0
11.9.4.2	lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH	1 (0.28%)	0	0	1	0	0	0	0	0
11.9.4.9	lipid metabolism.lipid degradation.beta-oxidation.multifunctional	1 (0.28%)	0	0	0	0	1	0	0	0
16.10	secondary metabolism.simple phenols	1 (0.28%)	0	0	0	0	0	0	0	1
17.1.3	hormone metabolism.abscisic acid.induced-regulated-responsive-activated	1 (0.28%)	0	0	1	0	0	0	0	0
17.2	hormone metabolism.auxin	1 (0.28%)	0	1	0	0	0	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (0.28%)	0	1	0	0	0	0	0	0
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	1 (0.28%)	0	1	0	0	0	0	0	0
2.1	major CHO metabolism.synthesis	1 (0.28%)	0	0	0	1	0	0	0	0
17.5	hormone metabolism.ethylene	1 (0.28%)	0	1	0	0	0	0	0	0
17.7	hormone metabolism.jasmonate	1 (0.28%)	0	0	0	1	0	0	0	0
17.7.2	hormone metabolism.jasmonate.signal transduction	1 (0.28%)	0	0	0	1	0	0	0	0
17.8	hormone metabolism.salicylic acid	1 (0.28%)	1	0	0	0	0	0	0	0
17.8.1	hormone metabolism.salicylic acid.synthesis-degradation	1 (0.28%)	1	0	0	0	0	0	0	0
19.99	tetrapyrrole synthesis.unspecified	1 (0.28%)	0	0	0	0	1	0	0	0
2.1.2	major CHO metabolism.synthesis.starch	1 (0.28%)	0	0	0	1	0	0	0	0
2.1.2.2	major CHO metabolism.synthesis.starch.starch synthase	1 (0.28%)	0	0	0	1	0	0	0	0
20.2.1	stress.abiotic.heat	1 (0.28%)	0	0	0	0	0	0	0	1
21.4	redox.glutaredoxins	1 (0.28%)	0	0	0	1	0	0	0	0
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	1 (0.28%)	0	0	0	0	1	0	0	0
23.4.3	nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase	1 (0.28%)	0	0	0	0	1	0	0	0
26.19	misc.plastocyanin-like	1 (0.28%)	0	0	0	0	1	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	1 (0.28%)	0	0	0	1	0	0	0	0
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	1 (0.28%)	0	0	0	1	0	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.28%)	0	0	0	0	1	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	1 (0.28%)	0	0	0	1	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.28%)	0	0	0	0	0	0	0	1
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.28%)	0	0	0	0	0	0	0	1
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.28%)	0	0	0	0	1	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.28%)	0	0	0	0	0	0	1	0
27.3.62	RNA.regulation of transcription.Nucleosome/chromatin assembly factor group	1 (0.28%)	0	0	1	0	0	0	0	0
29.1	protein.aa activation	1 (0.28%)	0	0	1	0	0	0	0	0
29.2.1.2.2.80	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0	1 (0.28%)	0	0	0	0	0	0	1	0
29.2.1.99.99	protein.synthesis.ribosomal protein.unknown.unknown	1 (0.28%)	0	0	0	0	1	0	0	0
29.3.1	protein.targeting.nucleus	1 (0.28%)	0	0	0	1	0	0	0	0
29.3.3	protein.targeting.chloroplast	1 (0.28%)	0	0	0	0	0	1	0	0
3.1	minor CHO metabolism.raffinose family	1 (0.28%)	0	0	0	0	0	0	0	1
3.1.1	minor CHO metabolism.raffinose family.galactinol synthases	1 (0.28%)	0	0	0	0	0	0	0	1
3.1.1.2	minor CHO metabolism.raffinose family.galactinol synthases.putative	1 (0.28%)	0	0	0	0	0	0	0	1
4.2	glycolysis.plastid branch	1 (0.28%)	0	0	0	0	0	1	0	0
6.1	gluconeogenesis / glyoxylate cycle.citrate synthase	1 (0.28%)	0	0	0	1	0	0	0	0
8.1	TCA / org transformation.TCA	1 (0.28%)	0	0	0	0	0	0	0	1
21	redox	1 (0.28%)	0	0	0	1	0	0	0	0
23	nucleotide metabolism	1 (0.28%)	0	0	0	0	1	0	0	0
30.11	signalling.light	1 (0.28%)	0	0	0	1	0	0	0	0
30.2	signalling.receptor kinases	1 (0.28%)	0	0	0	0	1	0	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	1 (0.28%)	0	0	0	0	1	0	0	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	1 (0.28%)	0	1	0	0	0	0	0	0
30.4.3	signalling.phosphinositides.bis(5-nucleosyl)-tetraphosphatase	1 (0.28%)	0	0	0	0	0	0	0	1
30.6	signalling.MAP kinases	1 (0.28%)	0	0	0	0	1	0	0	0
30.7	signalling.14-3-3 proteins	1 (0.28%)	1	0	0	0	0	0	0	0
34.15	transport.potassium	1 (0.28%)	0	0	0	0	1	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.28%)	0	0	1	0	0	0	0	0
34.19	transport.Major Intrinsic Proteins	1 (0.28%)	0	0	0	0	0	1	0	0
34.19.2	transport.Major Intrinsic Proteins.TIP	1 (0.28%)	0	0	0	0	0	1	0	0
34.23	transport.hormones	1 (0.28%)	0	0	1	0	0	0	0	0
34.23.1	transport.hormones.auxin	1 (0.28%)	0	0	1	0	0	0	0	0
4.2.14	glycolysis.plastid branch.pyruvate kinase (PK)	1 (0.28%)	0	0	0	0	0	1	0	0
8.1.4	TCA / org transformation.TCA.IDH	1 (0.28%)	0	0	0	0	0	0	0	1