InterPro domains associated with a binding site

Binding site
Motif_435
Name
E2FBNTRNR
Description
E2Fb found in the tobacco RNR (Ribonucleotide reductase) gene promoter; Binding site of tobacco E2F; Involved in upregulation of the promoter at G1/S transition; dE2F (distal reverse E2F element) important for regulating specific RNR1a gene expression in respsonse to UV-C irradiation
#Associated genes
312
#Associated InterPro terms
302

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InterPro Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
IPR027417P-loop containing nucleoside triphosphate hydrolase23 (7.37%)0631342121
IPR000719Protein kinase domain18 (5.77%)2012402124
IPR011009Protein kinase-like domain18 (5.77%)2012402124
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain17 (5.45%)2012402123
IPR008271Serine/threonine-protein kinase, active site17 (5.45%)2012402123
IPR013083Zinc finger, RING/FYVE/PHD-type12 (3.85%)0021412002
IPR001471AP2/ERF domain11 (3.53%)1202032001
IPR016024Armadillo-type fold11 (3.53%)1111221110
IPR016177DNA-binding domain11 (3.53%)1202032001
IPR012340Nucleic acid-binding, OB-fold11 (3.53%)0221010221
IPR023214HAD-like domain10 (3.21%)0001312012
IPR017441Protein kinase, ATP binding site10 (3.21%)2010401002
IPR011989Armadillo-like helical9 (2.88%)1111021110
IPR001289CCAAT-binding transcription factor, subunit B9 (2.88%)0020420001
IPR001757Cation-transporting P-type ATPase9 (2.88%)0001312002
IPR008250P-type ATPase, A domain9 (2.88%)0001312002
IPR023299P-type ATPase, cytoplasmic domain N9 (2.88%)0001312002
IPR018303P-type ATPase, phosphorylation site9 (2.88%)0001312002
IPR018362CCAAT-binding factor, conserved site8 (2.56%)0020420000
IPR015434DNA mismatch repair protein Pms1/Mlh28 (2.56%)1101211001
IPR002099DNA mismatch repair protein family8 (2.56%)1101211001
IPR013507DNA mismatch repair protein, C-terminal8 (2.56%)1101211001
IPR014790MutL, C-terminal, dimerisation8 (2.56%)1101211001
IPR020568Ribosomal protein S5 domain 2-type fold8 (2.56%)1101211001
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup8 (2.56%)1101211001
IPR007652Alpha 1,4-glycosyltransferase domain7 (2.24%)0001021111
IPR013069BTB/POZ7 (2.24%)0010121110
IPR011333BTB/POZ fold7 (2.24%)0010121110
IPR000210BTB/POZ-like7 (2.24%)0010121110
IPR014762DNA mismatch repair, conserved site7 (2.24%)1101210001
IPR008050DNA replication licensing factor Mcm77 (2.24%)0210010111
IPR007577Glycosyltransferase, DXD sugar-binding motif7 (2.24%)0001021111
IPR014001Helicase, superfamily 1/2, ATP-binding domain7 (2.24%)0201121000
IPR003594Histidine kinase-like ATPase, ATP-binding domain7 (2.24%)1101210001
IPR009057Homeodomain-like7 (2.24%)1001211010
IPR027925MCM N-terminal domain7 (2.24%)0210010111
IPR016196Major facilitator superfamily domain, general substrate transporter7 (2.24%)0100002211
IPR001208Mini-chromosome maintenance, DNA-dependent ATPase7 (2.24%)0210010111
IPR018525Mini-chromosome maintenance, conserved site7 (2.24%)0210010111
IPR027356NPH3 domain7 (2.24%)0010121110
IPR002452Alpha tubulin6 (1.92%)0000311001
IPR006539Cation-transporting P-type ATPase, subfamily IV6 (1.92%)0001211001
IPR001650Helicase, C-terminal6 (1.92%)0201111000
IPR001005SANT/Myb domain6 (1.92%)0001211010
IPR000217Tubulin6 (1.92%)0000311001
IPR023123Tubulin, C-terminal6 (1.92%)0000311001
IPR017975Tubulin, conserved site6 (1.92%)0000311001
IPR018316Tubulin/FtsZ, 2-layer sandwich domain6 (1.92%)0000311001
IPR008280Tubulin/FtsZ, C-terminal6 (1.92%)0000311001
IPR003008Tubulin/FtsZ, GTPase domain6 (1.92%)0000311001
IPR023271Aquaporin-like5 (1.60%)0000320000
IPR014733Barwin-like endoglucanase5 (1.60%)0001301000
IPR013320Concanavalin A-like lectin/glucanase, subgroup5 (1.60%)1000200002
IPR002963Expansin5 (1.60%)0001301000
IPR007117Expansin, cellulose-binding-like domain5 (1.60%)0001301000
IPR007118Expansin/Lol pI5 (1.60%)0001301000
IPR007112Expansin/pollen allergen, DPBB domain5 (1.60%)0001301000
IPR011701Major facilitator superfamily5 (1.60%)0000002111
IPR000425Major intrinsic protein5 (1.60%)0000320000
IPR022357Major intrinsic protein, conserved site5 (1.60%)0000320000
IPR013878Mo25-like5 (1.60%)1100010110
IPR006502Protein of unknown function DUF506, plant5 (1.60%)0000020111
IPR003395RecF/RecN/SMC, N-terminal5 (1.60%)0110201000
IPR009009RlpA-like double-psi beta-barrel domain5 (1.60%)0001301000
IPR010935SMCs flexible hinge5 (1.60%)0110201000
IPR003613U box domain5 (1.60%)0011201000
IPR001841Zinc finger, RING-type5 (1.60%)0010300001
IPR014786Anaphase-promoting complex subunit 2, C-terminal4 (1.28%)0001000111
IPR016158Cullin homology4 (1.28%)0001000111
IPR001373Cullin, N-terminal4 (1.28%)0001000111
IPR013763Cyclin-like4 (1.28%)1101000010
IPR006935Helicase/UvrB domain4 (1.28%)0011020000
IPR003347JmjC domain4 (1.28%)0001020010
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type4 (1.28%)0011000110
IPR007573Protein of unknown function DUF5664 (1.28%)0001101001
IPR004861Protein-tyrosine phosphatase, SIW14-like4 (1.28%)0001210000
IPR016130Protein-tyrosine phosphatase, active site4 (1.28%)0001210000
IPR020428Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic4 (1.28%)0001210000
IPR013955Replication factor A, C-terminal4 (1.28%)0011000110
IPR007199Replication factor-A protein 1, N-terminal4 (1.28%)0011000110
IPR004591Replication factor-a protein 1 Rpa14 (1.28%)0011000110
IPR017884SANT domain4 (1.28%)0000211000
IPR001680WD40 repeat4 (1.28%)0001201000
IPR017986WD40-repeat-containing domain4 (1.28%)0001201000
IPR015943WD40/YVTN repeat-like-containing domain4 (1.28%)0001201000
IPR011991Winged helix-turn-helix DNA-binding domain4 (1.28%)0001000111
IPR003593AAA+ ATPase domain3 (0.96%)0000000111
IPR001357BRCT domain3 (0.96%)0010001001
IPR001126DNA-repair protein, UmuC-like3 (0.96%)0010001001
IPR017963DNA-repair protein, UmuC-like, N-terminal3 (0.96%)0010001001
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal3 (0.96%)0200001000
IPR008979Galactose-binding domain-like3 (0.96%)0200010000
IPR006534H+ transporting P-type ATPase, subfamily IIIA3 (0.96%)0000101001
IPR001611Leucine-rich repeat3 (0.96%)0000200001
IPR020846Major facilitator superfamily domain3 (0.96%)0000002100
IPR025712Nucleoporin Nup54, alpha-helical domain3 (0.96%)0010010100
IPR024864Nucleoporin Nup54/Nup57/Nup443 (0.96%)0010010100
IPR012677Nucleotide-binding, alpha-beta plait3 (0.96%)0101000100
IPR023298P-type ATPase, transmembrane domain3 (0.96%)0000101001
IPR000504RNA recognition motif domain3 (0.96%)0101000100
IPR028309Retinoblastoma protein family3 (0.96%)1101000000
IPR002720Retinoblastoma-associated protein, A-box3 (0.96%)1101000000
IPR002719Retinoblastoma-associated protein, B-box3 (0.96%)1101000000
IPR024599Retinoblastoma-associated protein, N-terminal3 (0.96%)1101000000
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain3 (0.96%)1010000001
IPR018499Tetraspanin/Peripherin3 (0.96%)0001010001
IPR003349Transcription factor jumonji, JmjN3 (0.96%)0001020000
IPR005836ADP-glucose pyrophosphorylase, conserved site2 (0.64%)0000100001
IPR016181Acyl-CoA N-acyltransferase2 (0.64%)0000011000
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-like2 (0.64%)0001000001
IPR004827Basic-leucine zipper domain2 (0.64%)0000200000
IPR000008C2 domain2 (0.64%)0100000001
IPR004014Cation-transporting P-type ATPase, N-terminal2 (0.64%)0000001001
IPR011006CheY-like superfamily2 (0.64%)0000000020
IPR000922D-galactoside/L-rhamnose binding SUEL lectin domain2 (0.64%)0200000000
IPR007185DNA polymerase alpha/epsilon, subunit B2 (0.64%)1000000001
IPR017961DNA polymerase, Y-family, little finger domain2 (0.64%)0000001001
IPR015898G-protein gamma-like domain2 (0.64%)0000200000
IPR004152GAT2 (0.64%)0000101000
IPR004993GH3 auxin-responsive promoter2 (0.64%)0000100100
IPR011831Glucose-1-phosphate adenylyltransferase2 (0.64%)0000100001
IPR013781Glycoside hydrolase, catalytic domain2 (0.64%)0200000000
IPR001944Glycoside hydrolase, family 352 (0.64%)0200000000
IPR019801Glycoside hydrolase, family 35, conserved site2 (0.64%)0200000000
IPR017853Glycoside hydrolase, superfamily2 (0.64%)0200000000
IPR006121Heavy metal-associated domain, HMA2 (0.64%)0001100000
IPR009072Histone-fold2 (0.64%)0000020000
IPR001752Kinesin, motor domain2 (0.64%)0000010010
IPR019821Kinesin, motor region, conserved site2 (0.64%)0000010010
IPR027640Kinesin-like protein2 (0.64%)0000010010
IPR003591Leucine-rich repeat, typical subtype2 (0.64%)0000200000
IPR013210Leucine-rich repeat-containing N-terminal, type 22 (0.64%)0000200000
IPR004882Luc7-related2 (0.64%)0000000110
IPR023395Mitochondrial carrier domain2 (0.64%)1000001000
IPR002067Mitochondrial carrier protein2 (0.64%)1000001000
IPR018108Mitochondrial substrate/solute carrier2 (0.64%)1000001000
IPR005835Nucleotidyl transferase2 (0.64%)0000100001
IPR005123Oxoglutarate/iron-dependent dioxygenase2 (0.64%)0001000001
IPR023153PSPTO4464-like domain2 (0.64%)1010000000
IPR015947PUA-like domain2 (0.64%)0000010001
IPR002885Pentatricopeptide repeat2 (0.64%)0000001001
IPR000629RNA helicase, ATP-dependent, DEAD-box, conserved site2 (0.64%)0200000000
IPR014014RNA helicase, DEAD-box type, Q motif2 (0.64%)0200000000
IPR006839Ribosome-associated, YjgA2 (0.64%)1010000000
IPR014729Rossmann-like alpha/beta/alpha sandwich fold2 (0.64%)0000010001
IPR007146Sas10/Utp3/C1D2 (0.64%)0002000000
IPR001789Signal transduction response regulator, receiver domain2 (0.64%)0000000020
IPR000301Tetraspanin2 (0.64%)0001000001
IPR011990Tetratricopeptide-like helical2 (0.64%)0000001001
IPR012336Thioredoxin-like fold2 (0.64%)0100001000
IPR011004Trimeric LpxA-like2 (0.64%)0000100001
IPR001202WW domain2 (0.64%)0200000000
IPR013087Zinc finger C2H2-type/integrase DNA-binding domain2 (0.64%)0011000000
IPR007087Zinc finger, C2H22 (0.64%)0011000000
IPR015880Zinc finger, C2H2-like2 (0.64%)0011000000
IPR004198Zinc finger, C5HC2-type2 (0.64%)0000020000
IPR011011Zinc finger, FYVE/PHD-type2 (0.64%)0000011000
IPR019787Zinc finger, PHD-finger2 (0.64%)0000011000
IPR001965Zinc finger, PHD-type2 (0.64%)0000011000
IPR019786Zinc finger, PHD-type, conserved site2 (0.64%)0000011000
IPR007374ASCH domain1 (0.32%)0000010000
IPR002731ATPase, BadF/BadG/BcrA/BcrD type1 (0.32%)0010000000
IPR018082AmbAllergen1 (0.32%)0000000010
IPR002110Ankyrin repeat1 (0.32%)0000100000
IPR020683Ankyrin repeat-containing domain1 (0.32%)0000100000
IPR000225Armadillo1 (0.32%)0010000000
IPR006213Bax inhibitor 1, conserved site1 (0.32%)1000000000
IPR006214Bax inhibitor 1-related1 (0.32%)1000000000
IPR013838Beta tubulin, autoregulation binding site1 (0.32%)0000100000
IPR012295Beta2-adaptin/TBP, C-terminal domain1 (0.32%)0000000001
IPR004324Biopterin transport-related protein BT11 (0.32%)0100000000
IPR001025Bromo adjacent homology (BAH) domain1 (0.32%)0000000001
IPR000644CBS domain1 (0.32%)0000001000
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 21 (0.32%)0000010000
IPR024880COPII coat assembly protein, Sec161 (0.32%)0000000001
IPR001251CRAL-TRIO domain1 (0.32%)0000100000
IPR011074CRAL/TRIO, N-terminal domain1 (0.32%)0000100000
IPR005172CRC domain1 (0.32%)0100000000
IPR007052CS domain1 (0.32%)0100000000
IPR013784Carbohydrate-binding-like fold1 (0.32%)0000010000
IPR014766Carboxypeptidase, regulatory domain1 (0.32%)0000010000
IPR018607Chromosome transmission fidelity protein 81 (0.32%)0100000000
IPR009755Colon cancer-associated Mic1-like1 (0.32%)0000010000
IPR003377Cornichon1 (0.32%)0001000000
IPR008972Cupredoxin1 (0.32%)0000100000
IPR004367Cyclin, C-terminal domain1 (0.32%)0000000010
IPR006671Cyclin, N-terminal1 (0.32%)0000000010
IPR015345Cytokinin dehydrogenase 1, FAD/cytokinin binding domain1 (0.32%)0000010000
IPR020838DBINO domain1 (0.32%)0000100000
IPR014876DEK, C-terminal1 (0.32%)1000000000
IPR022880DNA polymerase IV1 (0.32%)0000001000
IPR024639DNA polymerase epsilon subunit B, N-terminal1 (0.32%)0000000001
IPR024728DNA polymerase type-Y, HhH motif1 (0.32%)0000001000
IPR003657DNA-binding WRKY1 (0.32%)0001000000
IPR001623DnaJ domain1 (0.32%)0010000000
IPR018253DnaJ domain, conserved site1 (0.32%)0010000000
IPR005175Domain of unknown function DUF2961 (0.32%)0000000100
IPR008942ENTH/VHS1 (0.32%)0000001000
IPR002740EVE domain1 (0.32%)0000000001
IPR008990Electron transport accessory protein-like domain1 (0.32%)0001000000
IPR001810F-box domain1 (0.32%)0000100000
IPR006094FAD linked oxidase, N-terminal1 (0.32%)0000010000
IPR016166FAD-binding, type 21 (0.32%)0000010000
IPR016167FAD-binding, type 2, subdomain 11 (0.32%)0000010000
IPR016164FAD-linked oxidase-like, C-terminal1 (0.32%)0000010000
IPR026055Fatty acyl-CoA reductase1 (0.32%)0000100000
IPR000182GNAT domain1 (0.32%)0000001000
IPR011013Galactose mutarotase-like domain1 (0.32%)0000010000
IPR002495Glycosyl transferase, family 81 (0.32%)0000010000
IPR002902Gnk2-homologous domain1 (0.32%)1000000000
IPR006379HAD-superfamily hydrolase, subfamily IIB1 (0.32%)0000000010
IPR008978HSP20-like chaperone1 (0.32%)0100000000
IPR009071High mobility group box domain1 (0.32%)0001000000
IPR001951Histone H41 (0.32%)0000010000
IPR019809Histone H4, conserved site1 (0.32%)0000010000
IPR007125Histone core1 (0.32%)0000010000
IPR025718Histone deacetylase complex subunit SAP30, Sin3 binding domain1 (0.32%)0010000000
IPR024145Histone deacetylase complex subunit SAP30/SAP30-like1 (0.32%)0010000000
IPR001356Homeobox domain1 (0.32%)0100000000
IPR015194ISWI HAND domain1 (0.32%)0000100000
IPR014756Immunoglobulin E-set1 (0.32%)0000001000
IPR027443Isopenicillin N synthase-like1 (0.32%)0001000000
IPR004883Lateral organ boundaries, LOB1 (0.32%)0000010000
IPR003409MORN motif1 (0.32%)0000010000
IPR013120Male sterility, NAD-binding1 (0.32%)0000100000
IPR009542Microsomal signal peptidase 12kDa subunit1 (0.32%)0010000000
IPR017930Myb domain1 (0.32%)0001000000
IPR006447Myb domain, plants1 (0.32%)0000000010
IPR017877Myb-like domain1 (0.32%)0000010000
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain1 (0.32%)0000000001
IPR003441NAC domain1 (0.32%)0100000000
IPR016040NAD(P)-binding domain1 (0.32%)0000100000
IPR026992Non-haem dioxygenase N-terminal domain1 (0.32%)0001000000
IPR012940Nucleic acid binding NABP1 (0.32%)0000010000
IPR002164Nucleosome assembly protein (NAP)1 (0.32%)0000001000
IPR008721Origin recognition complex, subunit 61 (0.32%)0000100000
IPR003323Ovarian tumour, otubain1 (0.32%)0000010000
IPR006093Oxygen oxidoreductase covalent FAD-binding site1 (0.32%)0000010000
IPR002022Pectate lyase/Amb allergen1 (0.32%)0000000010
IPR012334Pectin lyase fold1 (0.32%)0000000010
IPR011050Pectin lyase fold/virulence factor1 (0.32%)0000000010
IPR003375Photosystem I PsaE, reaction centre subunit IV1 (0.32%)0001000000
IPR000270Phox/Bem1p1 (0.32%)0010000000
IPR003245Plastocyanin-like1 (0.32%)0000100000
IPR011993Pleckstrin homology-like domain1 (0.32%)0100000000
IPR002004Polyadenylate-binding protein/Hyperplastic disc protein1 (0.32%)0100000000
IPR006620Prolyl 4-hydroxylase, alpha subunit1 (0.32%)0000000001
IPR010634Protein of unknown function DUF12231 (0.32%)0100000000
IPR009719Protein of unknown function DUF1296, plant1 (0.32%)0000010000
IPR010369Protein of unknown function DUF9661 (0.32%)0000010000
IPR015655Protein phosphatase 2C1 (0.32%)0000010000
IPR001932Protein phosphatase 2C (PP2C)-like domain1 (0.32%)0000010000
IPR006145Pseudouridine synthase, RsuA/RluB/C/D/E/F1 (0.32%)0000001000
IPR020103Pseudouridine synthase, catalytic domain1 (0.32%)0000001000
IPR001313Pumilio RNA-binding repeat1 (0.32%)0000010000
IPR003954RNA recognition motif domain, eukaryote1 (0.32%)0100000000
IPR000195Rab-GTPase-TBC domain1 (0.32%)0000010000
IPR010325Rhamnogalacturonate lyase1 (0.32%)0000010000
IPR006700Ribosomal RNA small subunit methyltransferase E1 (0.32%)0000000001
IPR012606Ribosomal protein S13/S15, N-terminal1 (0.32%)0100000000
IPR000589Ribosomal protein S151 (0.32%)0100000000
IPR023029Ribosomal protein S15P1 (0.32%)0100000000
IPR009068S15/NS1, RNA-binding1 (0.32%)0100000000
IPR005062SAC3/GANP/Nin1/mts3/eIF-3 p251 (0.32%)0000000001
IPR015195SLIDE domain1 (0.32%)0000100000
IPR000330SNF2-related1 (0.32%)0000100000
IPR018972Sas10 C-terminal domain1 (0.32%)0001000000
IPR024340Sec16, central conserved domain1 (0.32%)0000000001
IPR009686Senescence/spartin-associated1 (0.32%)0000001000
IPR005225Small GTP-binding protein domain1 (0.32%)0100000000
IPR001806Small GTPase superfamily1 (0.32%)0100000000
IPR003579Small GTPase superfamily, Rab type1 (0.32%)0100000000
IPR020849Small GTPase superfamily, Ras type1 (0.32%)0100000000
IPR003578Small GTPase superfamily, Rho type1 (0.32%)0100000000
IPR022377Small hydrophilic plant seed protein, conserved site1 (0.32%)0000000001
IPR006969Stigma-specific protein Stig11 (0.32%)0000010000
IPR000389Stress induced protein1 (0.32%)0000000001
IPR005829Sugar transporter, conserved site1 (0.32%)0000000001
IPR000814TATA-box binding protein1 (0.32%)0000000001
IPR003617Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type1 (0.32%)0000000001
IPR003958Transcription factor CBF/NF-Y/archaeal histone1 (0.32%)0000010000
IPR017923Transcription factor IIS, N-terminal1 (0.32%)0000000001
IPR017887Transcription factor TCP subgroup1 (0.32%)0000010000
IPR003957Transcription factor, NFYB/HAP3 subunit1 (0.32%)0000010000
IPR003956Transcription factor, NFYB/HAP3, conserved site1 (0.32%)0000010000
IPR005333Transcription factor, TCP1 (0.32%)0000010000
IPR003337Trehalose-phosphatase1 (0.32%)0000000010
IPR009060UBA-like1 (0.32%)0000010000
IPR002213UDP-glucuronosyl/UDP-glucosyltransferase1 (0.32%)0000001000
IPR018791UV radiation resistance protein/autophagy-related protein 141 (0.32%)1000000000
IPR019645Uncharacterised protein family Ycf151 (0.32%)0000010000
IPR006016UspA1 (0.32%)0000010000
IPR002014VHS1 (0.32%)0000001000
IPR018205VHS subgroup1 (0.32%)0000001000
IPR026847Vacuolar protein sorting-associated protein 131 (0.32%)0100000000
IPR009543Vacuolar protein sorting-associated protein 13 domain1 (0.32%)0100000000
IPR026854Vacuolar protein sorting-associated protein 13A N-terminal domain1 (0.32%)0100000000
IPR009291Vacuolar protein sorting-associated protein 621 (0.32%)0100000000
IPR016170Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain1 (0.32%)0000010000
IPR001594Zinc finger, DHHC-type, palmitoyltransferase1 (0.32%)0000100000
IPR011016Zinc finger, RING-CH-type1 (0.32%)0000000001
IPR002616tRNA-guanine(15) transglycosylase-like1 (0.32%)0000010000