PLAZA 3.0 Dicots : Binding Sites

Gene Ontology terms associated with a binding site

Binding site: Motif_427
Name: LS7ATPR1
Description: LS7; A positive salicylic acid-inducible element found in the Arabidopsis PR-1 gene promoter; Binding site of TGA1; NPR1 increased the binding of TGA2 to the element; NPR1 is essential in activating systemic, inducible plant defense responses; TGA6 expressed in roots in young seedlings; TGA2.1 is a direct transcriptional activator; TGA2.2 stabilizes TGA2.1 binding; The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors

#Associated genes: 6
#Associated GO terms: 263

Biological Process
Molecular Function
Cellular Component

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Cellular Component (back to top)

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GO	Description	#Associated genes	ath	egr
GO:0005623	cell	1 (16.67%)	1	0
GO:0044464	cell part	1 (16.67%)	1	0
GO:0005622	intracellular	1 (16.67%)	1	0
GO:0043231	intracellular membrane-bounded organelle	1 (16.67%)	1	0
GO:0043229	intracellular organelle	1 (16.67%)	1	0
GO:0044424	intracellular part	1 (16.67%)	1	0
GO:0016020	membrane	1 (16.67%)	0	1
GO:0043227	membrane-bounded organelle	1 (16.67%)	1	0
GO:0005634	nucleus	1 (16.67%)	1	0
GO:0043226	organelle	1 (16.67%)	1	0

Molecular Function (back to top)

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GO	Description	#Associated genes	ath	cme	egr	ppe	vvi
GO:0005488	binding	4 (66.67%)	1	1	0	0	2
GO:0097159	organic cyclic compound binding	3 (50.00%)	1	1	0	0	1
GO:0005515	protein binding	3 (50.00%)	1	1	0	0	1
GO:0043168	anion binding	2 (33.33%)	1	0	0	0	1
GO:1901363	heterocyclic compound binding	2 (33.33%)	0	1	0	0	1
GO:0043167	ion binding	2 (33.33%)	1	0	0	0	1
GO:0001071	nucleic acid binding transcription factor activity	2 (33.33%)	0	1	0	1	0
GO:0003700	sequence-specific DNA binding transcription factor activity	2 (33.33%)	0	1	0	1	0
GO:0036094	small molecule binding	2 (33.33%)	1	0	0	0	1
GO:0005524	ATP binding	1 (16.67%)	0	0	0	0	1
GO:0003677	DNA binding	1 (16.67%)	0	1	0	0	0
GO:0030554	adenyl nucleotide binding	1 (16.67%)	0	0	0	0	1
GO:0032559	adenyl ribonucleotide binding	1 (16.67%)	0	0	0	0	1
GO:0097367	carbohydrate derivative binding	1 (16.67%)	0	0	0	0	1
GO:0031406	carboxylic acid binding	1 (16.67%)	1	0	0	0	0
GO:0003824	catalytic activity	1 (16.67%)	0	0	0	0	1
GO:0015267	channel activity	1 (16.67%)	0	0	1	0	0
GO:0005231	excitatory extracellular ligand-gated ion channel activity	1 (16.67%)	0	0	1	0	0
GO:0005230	extracellular ligand-gated ion channel activity	1 (16.67%)	0	0	1	0	0
GO:0005234	extracellular-glutamate-gated ion channel activity	1 (16.67%)	0	0	1	0	0
GO:0022836	gated channel activity	1 (16.67%)	0	0	1	0	0
GO:0008066	glutamate receptor activity	1 (16.67%)	0	0	1	0	0
GO:0005216	ion channel activity	1 (16.67%)	0	0	1	0	0
GO:0022839	ion gated channel activity	1 (16.67%)	0	0	1	0	0
GO:0015075	ion transmembrane transporter activity	1 (16.67%)	0	0	1	0	0
GO:0004970	ionotropic glutamate receptor activity	1 (16.67%)	0	0	1	0	0
GO:0016301	kinase activity	1 (16.67%)	0	0	0	0	1
GO:0022834	ligand-gated channel activity	1 (16.67%)	0	0	1	0	0
GO:0015276	ligand-gated ion channel activity	1 (16.67%)	0	0	1	0	0
GO:0060089	molecular transducer activity	1 (16.67%)	0	0	1	0	0
GO:0033293	monocarboxylic acid binding	1 (16.67%)	1	0	0	0	0
GO:0003676	nucleic acid binding	1 (16.67%)	0	1	0	0	0
GO:0001882	nucleoside binding	1 (16.67%)	0	0	0	0	1
GO:1901265	nucleoside phosphate binding	1 (16.67%)	0	0	0	0	1
GO:0000166	nucleotide binding	1 (16.67%)	0	0	0	0	1
GO:0043177	organic acid binding	1 (16.67%)	1	0	0	0	0
GO:0022803	passive transmembrane transporter activity	1 (16.67%)	0	0	1	0	0
GO:0016773	phosphotransferase activity, alcohol group as acceptor	1 (16.67%)	0	0	0	0	1
GO:0046983	protein dimerization activity	1 (16.67%)	0	1	0	0	0
GO:0046982	protein heterodimerization activity	1 (16.67%)	0	1	0	0	0
GO:0004672	protein kinase activity	1 (16.67%)	0	0	0	0	1
GO:0004674	protein serine/threonine kinase activity	1 (16.67%)	0	0	0	0	1
GO:0001883	purine nucleoside binding	1 (16.67%)	0	0	0	0	1
GO:0017076	purine nucleotide binding	1 (16.67%)	0	0	0	0	1
GO:0032550	purine ribonucleoside binding	1 (16.67%)	0	0	0	0	1
GO:0035639	purine ribonucleoside triphosphate binding	1 (16.67%)	0	0	0	0	1
GO:0032555	purine ribonucleotide binding	1 (16.67%)	0	0	0	0	1
GO:0004872	receptor activity	1 (16.67%)	0	0	1	0	0
GO:0032549	ribonucleoside binding	1 (16.67%)	0	0	0	0	1
GO:0032553	ribonucleotide binding	1 (16.67%)	0	0	0	0	1
GO:1901149	salicylic acid binding	1 (16.67%)	1	0	0	0	0
GO:0043565	sequence-specific DNA binding	1 (16.67%)	0	1	0	0	0
GO:0004871	signal transducer activity	1 (16.67%)	0	0	1	0	0
GO:0038023	signaling receptor activity	1 (16.67%)	0	0	1	0	0
GO:0022838	substrate-specific channel activity	1 (16.67%)	0	0	1	0	0
GO:0022891	substrate-specific transmembrane transporter activity	1 (16.67%)	0	0	1	0	0
GO:0022892	substrate-specific transporter activity	1 (16.67%)	0	0	1	0	0
GO:0016740	transferase activity	1 (16.67%)	0	0	0	0	1
GO:0016772	transferase activity, transferring phosphorus-containing groups	1 (16.67%)	0	0	0	0	1
GO:0004888	transmembrane signaling receptor activity	1 (16.67%)	0	0	1	0	0
GO:0022857	transmembrane transporter activity	1 (16.67%)	0	0	1	0	0
GO:0005215	transporter activity	1 (16.67%)	0	0	1	0	0

Biological Process (back to top)

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GO	Description	#Associated genes	ath	cme	egr	vvi
GO:0044260	cellular macromolecule metabolic process	3 (50.00%)	1	1	0	1
GO:0044237	cellular metabolic process	3 (50.00%)	1	1	0	1
GO:0009987	cellular process	3 (50.00%)	1	1	0	1
GO:0043170	macromolecule metabolic process	3 (50.00%)	1	1	0	1
GO:0008152	metabolic process	3 (50.00%)	1	1	0	1
GO:0071704	organic substance metabolic process	3 (50.00%)	1	1	0	1
GO:0044238	primary metabolic process	3 (50.00%)	1	1	0	1
GO:0065007	biological regulation	2 (33.33%)	1	1	0	0
GO:0007154	cell communication	2 (33.33%)	1	1	0	0
GO:0044267	cellular protein metabolic process	2 (33.33%)	1	0	0	1
GO:0006464	cellular protein modification process	2 (33.33%)	1	0	0	1
GO:0051716	cellular response to stimulus	2 (33.33%)	1	1	0	0
GO:0043412	macromolecule modification	2 (33.33%)	1	0	0	1
GO:0048518	positive regulation of biological process	2 (33.33%)	1	1	0	0
GO:0019538	protein metabolic process	2 (33.33%)	1	0	0	1
GO:0036211	protein modification process	2 (33.33%)	1	0	0	1
GO:0050789	regulation of biological process	2 (33.33%)	1	1	0	0
GO:0050794	regulation of cellular process	2 (33.33%)	1	1	0	0
GO:0050896	response to stimulus	2 (33.33%)	1	1	0	0
GO:0006950	response to stress	2 (33.33%)	1	1	0	0
GO:0044763	single-organism cellular process	2 (33.33%)	1	1	0	0
GO:0044699	single-organism process	2 (33.33%)	1	1	0	0
GO:0032774	RNA biosynthetic process	1 (16.67%)	0	1	0	0
GO:0016070	RNA metabolic process	1 (16.67%)	0	1	0	0
GO:0048856	anatomical structure development	1 (16.67%)	0	1	0	0
GO:0019438	aromatic compound biosynthetic process	1 (16.67%)	0	1	0	0
GO:0009058	biosynthetic process	1 (16.67%)	0	1	0	0
GO:0006725	cellular aromatic compound metabolic process	1 (16.67%)	0	1	0	0
GO:0044249	cellular biosynthetic process	1 (16.67%)	0	1	0	0
GO:0034645	cellular macromolecule biosynthetic process	1 (16.67%)	0	1	0	0
GO:0044271	cellular nitrogen compound biosynthetic process	1 (16.67%)	0	1	0	0
GO:0034641	cellular nitrogen compound metabolic process	1 (16.67%)	0	1	0	0
GO:0070887	cellular response to chemical stimulus	1 (16.67%)	1	0	0	0
GO:0071495	cellular response to endogenous stimulus	1 (16.67%)	1	0	0	0
GO:0071496	cellular response to external stimulus	1 (16.67%)	0	1	0	0
GO:0031668	cellular response to extracellular stimulus	1 (16.67%)	0	1	0	0
GO:0032870	cellular response to hormone stimulus	1 (16.67%)	1	0	0	0
GO:0071395	cellular response to jasmonic acid stimulus	1 (16.67%)	1	0	0	0
GO:0031669	cellular response to nutrient levels	1 (16.67%)	0	1	0	0
GO:0071407	cellular response to organic cyclic compound	1 (16.67%)	1	0	0	0
GO:0071310	cellular response to organic substance	1 (16.67%)	1	0	0	0
GO:1901701	cellular response to oxygen-containing compound	1 (16.67%)	1	0	0	0
GO:0071446	cellular response to salicylic acid stimulus	1 (16.67%)	1	0	0	0
GO:0009267	cellular response to starvation	1 (16.67%)	0	1	0	0
GO:0033554	cellular response to stress	1 (16.67%)	0	1	0	0
GO:0006952	defense response	1 (16.67%)	1	0	0	0
GO:0042742	defense response to bacterium	1 (16.67%)	1	0	0	0
GO:0009816	defense response to bacterium, incompatible interaction	1 (16.67%)	1	0	0	0
GO:0050832	defense response to fungus	1 (16.67%)	1	0	0	0
GO:0009817	defense response to fungus, incompatible interaction	1 (16.67%)	1	0	0	0
GO:0098542	defense response to other organism	1 (16.67%)	1	0	0	0
GO:0009814	defense response, incompatible interaction	1 (16.67%)	1	0	0	0
GO:0032502	developmental process	1 (16.67%)	0	1	0	0
GO:0003006	developmental process involved in reproduction	1 (16.67%)	0	1	0	0
GO:0080185	effector dependent induction by symbiont of host immune response	1 (16.67%)	1	0	0	0
GO:0051234	establishment of localization	1 (16.67%)	0	0	1	0
GO:0010154	fruit development	1 (16.67%)	0	1	0	0
GO:0010467	gene expression	1 (16.67%)	0	1	0	0
GO:0018130	heterocycle biosynthetic process	1 (16.67%)	0	1	0	0
GO:0046483	heterocycle metabolic process	1 (16.67%)	0	1	0	0
GO:0009755	hormone-mediated signaling pathway	1 (16.67%)	1	0	0	0
GO:0006955	immune response	1 (16.67%)	1	0	0	0
GO:0002376	immune system process	1 (16.67%)	1	0	0	0
GO:0052558	induction by organism of immune response of other organism involved in symbiotic interaction	1 (16.67%)	1	0	0	0
GO:0052559	induction by symbiont of host immune response	1 (16.67%)	1	0	0	0
GO:0045087	innate immune response	1 (16.67%)	1	0	0	0
GO:0051701	interaction with host	1 (16.67%)	1	0	0	0
GO:0044419	interspecies interaction between organisms	1 (16.67%)	1	0	0	0
GO:0009867	jasmonic acid mediated signaling pathway	1 (16.67%)	1	0	0	0
GO:0051179	localization	1 (16.67%)	0	0	1	0
GO:0009059	macromolecule biosynthetic process	1 (16.67%)	0	1	0	0
GO:0044003	modification by symbiont of host morphology or physiology	1 (16.67%)	1	0	0	0
GO:0035821	modification of morphology or physiology of other organism	1 (16.67%)	1	0	0	0
GO:0051817	modification of morphology or physiology of other organism involved in symbiotic interaction	1 (16.67%)	1	0	0	0
GO:0052255	modulation by organism of defense response of other organism involved in symbiotic interaction	1 (16.67%)	1	0	0	0
GO:0052552	modulation by organism of immune response of other organism involved in symbiotic interaction	1 (16.67%)	1	0	0	0
GO:0052031	modulation by symbiont of host defense response	1 (16.67%)	1	0	0	0
GO:0052553	modulation by symbiont of host immune response	1 (16.67%)	1	0	0	0
GO:0051704	multi-organism process	1 (16.67%)	1	0	0	0
GO:0032504	multicellular organism reproduction	1 (16.67%)	0	1	0	0
GO:0007275	multicellular organismal development	1 (16.67%)	0	1	0	0
GO:0032501	multicellular organismal process	1 (16.67%)	0	1	0	0
GO:0048609	multicellular organismal reproductive process	1 (16.67%)	0	1	0	0
GO:0006807	nitrogen compound metabolic process	1 (16.67%)	0	1	0	0
GO:0090304	nucleic acid metabolic process	1 (16.67%)	0	1	0	0
GO:0034654	nucleobase-containing compound biosynthetic process	1 (16.67%)	0	1	0	0
GO:0006139	nucleobase-containing compound metabolic process	1 (16.67%)	0	1	0	0
GO:1901362	organic cyclic compound biosynthetic process	1 (16.67%)	0	1	0	0
GO:1901360	organic cyclic compound metabolic process	1 (16.67%)	0	1	0	0
GO:1901576	organic substance biosynthetic process	1 (16.67%)	0	1	0	0
GO:0006796	phosphate-containing compound metabolic process	1 (16.67%)	0	0	0	1
GO:0006793	phosphorus metabolic process	1 (16.67%)	0	0	0	1
GO:0016310	phosphorylation	1 (16.67%)	0	0	0	1
GO:0052555	positive regulation by organism of immune response of other organism involved in symbiotic interaction	1 (16.67%)	1	0	0	0
GO:0052556	positive regulation by symbiont of host immune response	1 (16.67%)	1	0	0	0
GO:0051254	positive regulation of RNA metabolic process	1 (16.67%)	0	1	0	0
GO:0009891	positive regulation of biosynthetic process	1 (16.67%)	0	1	0	0
GO:0031328	positive regulation of cellular biosynthetic process	1 (16.67%)	0	1	0	0
GO:0031325	positive regulation of cellular metabolic process	1 (16.67%)	0	1	0	0
GO:0048522	positive regulation of cellular process	1 (16.67%)	0	1	0	0
GO:0010628	positive regulation of gene expression	1 (16.67%)	0	1	0	0
GO:0050778	positive regulation of immune response	1 (16.67%)	1	0	0	0
GO:0002684	positive regulation of immune system process	1 (16.67%)	1	0	0	0
GO:0010557	positive regulation of macromolecule biosynthetic process	1 (16.67%)	0	1	0	0
GO:0010604	positive regulation of macromolecule metabolic process	1 (16.67%)	0	1	0	0
GO:0009893	positive regulation of metabolic process	1 (16.67%)	0	1	0	0
GO:0051240	positive regulation of multicellular organismal process	1 (16.67%)	0	1	0	0
GO:0051173	positive regulation of nitrogen compound metabolic process	1 (16.67%)	0	1	0	0
GO:0045935	positive regulation of nucleobase-containing compound metabolic process	1 (16.67%)	0	1	0	0
GO:2000243	positive regulation of reproductive process	1 (16.67%)	0	1	0	0
GO:0048584	positive regulation of response to stimulus	1 (16.67%)	1	0	0	0
GO:2000693	positive regulation of seed maturation	1 (16.67%)	0	1	0	0
GO:0045893	positive regulation of transcription, DNA-dependent	1 (16.67%)	0	1	0	0
GO:0009791	post-embryonic development	1 (16.67%)	0	1	0	0
GO:0032446	protein modification by small protein conjugation	1 (16.67%)	1	0	0	0
GO:0070647	protein modification by small protein conjugation or removal	1 (16.67%)	1	0	0	0
GO:0006468	protein phosphorylation	1 (16.67%)	0	0	0	1
GO:0016567	protein ubiquitination	1 (16.67%)	1	0	0	0
GO:2001141	regulation of RNA biosynthetic process	1 (16.67%)	0	1	0	0
GO:0051252	regulation of RNA metabolic process	1 (16.67%)	0	1	0	0
GO:0065008	regulation of biological quality	1 (16.67%)	1	0	0	0
GO:0009889	regulation of biosynthetic process	1 (16.67%)	0	1	0	0
GO:0010646	regulation of cell communication	1 (16.67%)	1	0	0	0
GO:0031326	regulation of cellular biosynthetic process	1 (16.67%)	0	1	0	0
GO:2000112	regulation of cellular macromolecule biosynthetic process	1 (16.67%)	0	1	0	0
GO:0031323	regulation of cellular metabolic process	1 (16.67%)	0	1	0	0
GO:0031347	regulation of defense response	1 (16.67%)	1	0	0	0
GO:0050793	regulation of developmental process	1 (16.67%)	0	1	0	0
GO:0010468	regulation of gene expression	1 (16.67%)	0	1	0	0
GO:0050776	regulation of immune response	1 (16.67%)	1	0	0	0
GO:0002682	regulation of immune system process	1 (16.67%)	1	0	0	0
GO:2000022	regulation of jasmonic acid mediated signaling pathway	1 (16.67%)	1	0	0	0
GO:0010556	regulation of macromolecule biosynthetic process	1 (16.67%)	0	1	0	0
GO:0060255	regulation of macromolecule metabolic process	1 (16.67%)	0	1	0	0
GO:0019222	regulation of metabolic process	1 (16.67%)	0	1	0	0
GO:2000026	regulation of multicellular organismal development	1 (16.67%)	0	1	0	0
GO:0051239	regulation of multicellular organismal process	1 (16.67%)	0	1	0	0
GO:0051171	regulation of nitrogen compound metabolic process	1 (16.67%)	0	1	0	0
GO:0019219	regulation of nucleobase-containing compound metabolic process	1 (16.67%)	0	1	0	0
GO:0048580	regulation of post-embryonic development	1 (16.67%)	0	1	0	0
GO:0080090	regulation of primary metabolic process	1 (16.67%)	0	1	0	0
GO:2000241	regulation of reproductive process	1 (16.67%)	0	1	0	0
GO:0048583	regulation of response to stimulus	1 (16.67%)	1	0	0	0
GO:0080134	regulation of response to stress	1 (16.67%)	1	0	0	0
GO:2000031	regulation of salicylic acid mediated signaling pathway	1 (16.67%)	1	0	0	0
GO:0080050	regulation of seed development	1 (16.67%)	0	1	0	0
GO:2000034	regulation of seed maturation	1 (16.67%)	0	1	0	0
GO:0009966	regulation of signal transduction	1 (16.67%)	1	0	0	0
GO:0023051	regulation of signaling	1 (16.67%)	1	0	0	0
GO:0006355	regulation of transcription, DNA-dependent	1 (16.67%)	0	1	0	0
GO:0000003	reproduction	1 (16.67%)	0	1	0	0
GO:0022414	reproductive process	1 (16.67%)	0	1	0	0
GO:0048608	reproductive structure development	1 (16.67%)	0	1	0	0
GO:0061458	reproductive system development	1 (16.67%)	0	1	0	0
GO:0009617	response to bacterium	1 (16.67%)	1	0	0	0
GO:0009607	response to biotic stimulus	1 (16.67%)	1	0	0	0
GO:0042221	response to chemical	1 (16.67%)	1	0	0	0
GO:0052173	response to defenses of other organism involved in symbiotic interaction	1 (16.67%)	1	0	0	0
GO:0009719	response to endogenous stimulus	1 (16.67%)	1	0	0	0
GO:0009605	response to external stimulus	1 (16.67%)	0	1	0	0
GO:0009991	response to extracellular stimulus	1 (16.67%)	0	1	0	0
GO:0009620	response to fungus	1 (16.67%)	1	0	0	0
GO:0009725	response to hormone	1 (16.67%)	1	0	0	0
GO:0075136	response to host	1 (16.67%)	1	0	0	0
GO:0052200	response to host defenses	1 (16.67%)	1	0	0	0
GO:0052572	response to host immune response	1 (16.67%)	1	0	0	0
GO:0052564	response to immune response of other organism involved in symbiotic interaction	1 (16.67%)	1	0	0	0
GO:0009753	response to jasmonic acid	1 (16.67%)	1	0	0	0
GO:0031667	response to nutrient levels	1 (16.67%)	0	1	0	0
GO:0014070	response to organic cyclic compound	1 (16.67%)	1	0	0	0
GO:0010033	response to organic substance	1 (16.67%)	1	0	0	0
GO:0051707	response to other organism	1 (16.67%)	1	0	0	0
GO:1901700	response to oxygen-containing compound	1 (16.67%)	1	0	0	0
GO:0009751	response to salicylic acid	1 (16.67%)	1	0	0	0
GO:0042594	response to starvation	1 (16.67%)	0	1	0	0
GO:0009410	response to xenobiotic stimulus	1 (16.67%)	1	0	0	0
GO:0009863	salicylic acid mediated signaling pathway	1 (16.67%)	1	0	0	0
GO:0048316	seed development	1 (16.67%)	0	1	0	0
GO:0010431	seed maturation	1 (16.67%)	0	1	0	0
GO:0007165	signal transduction	1 (16.67%)	1	0	0	0
GO:0023052	signaling	1 (16.67%)	1	0	0	0
GO:0044702	single organism reproductive process	1 (16.67%)	0	1	0	0
GO:0044700	single organism signaling	1 (16.67%)	1	0	0	0
GO:0044707	single-multicellular organism process	1 (16.67%)	0	1	0	0
GO:0044767	single-organism developmental process	1 (16.67%)	0	1	0	0
GO:0044403	symbiosis, encompassing mutualism through parasitism	1 (16.67%)	1	0	0	0
GO:0048731	system development	1 (16.67%)	0	1	0	0
GO:0009627	systemic acquired resistance	1 (16.67%)	1	0	0	0
GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	1 (16.67%)	1	0	0	0
GO:0006351	transcription, DNA-templated	1 (16.67%)	0	1	0	0
GO:0006810	transport	1 (16.67%)	0	0	1	0