PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_420
Name: SORLREP2AT
Description: one of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; See also all SORLREPs and all SORLIPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data

#Associated genes: 96
#Associated MapMan terms: 64

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	14 (14.58%)	0	0	1	7	3	0	1	2
27.3	RNA.regulation of transcription	14 (14.58%)	0	0	1	7	3	0	1	2
26	misc	11 (11.46%)	4	1	0	2	1	0	2	1
19	tetrapyrrole synthesis	10 (10.42%)	1	3	2	1	0	1	1	1
19.2	tetrapyrrole synthesis.glu-tRNA reductase	10 (10.42%)	1	3	2	1	0	1	1	1
29	protein	7 (7.29%)	0	0	0	2	2	1	1	1
17	hormone metabolism	6 (6.25%)	0	1	1	1	0	1	2	0
17.5	hormone metabolism.ethylene	5 (5.21%)	0	1	1	1	0	1	1	0
26.9	misc.glutathione S transferases	5 (5.21%)	2	1	0	1	0	0	1	0
17.5.2	hormone metabolism.ethylene.signal transduction	3 (3.13%)	0	0	1	0	0	1	1	0
29.5	protein.degradation	3 (3.13%)	0	0	0	1	1	1	0	0
29.5.1	protein.degradation.subtilases	3 (3.13%)	0	0	0	1	1	1	0	0
31	cell	3 (3.13%)	1	0	0	2	0	0	0	0
10	cell wall	2 (2.08%)	1	1	0	0	0	0	0	0
11	lipid metabolism	2 (2.08%)	0	0	0	2	0	0	0	0
11.9	lipid metabolism.lipid degradation	2 (2.08%)	0	0	0	2	0	0	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	2 (2.08%)	0	0	0	2	0	0	0	0
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	2 (2.08%)	0	1	0	1	0	0	0	0
20	stress	2 (2.08%)	0	1	0	1	0	0	0	0
20.2	stress.abiotic	2 (2.08%)	0	1	0	1	0	0	0	0
20.2.99	stress.abiotic.unspecified	2 (2.08%)	0	1	0	1	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	2 (2.08%)	0	0	0	1	1	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	2 (2.08%)	0	0	0	2	0	0	0	0
27.3.99	RNA.regulation of transcription.unclassified	2 (2.08%)	0	0	0	2	0	0	0	0
29.3	protein.targeting	2 (2.08%)	0	0	0	1	0	0	1	0
29.3.4	protein.targeting.secretory pathway	2 (2.08%)	0	0	0	1	0	0	1	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	2 (2.08%)	0	0	0	1	0	0	1	0
30	signalling	2 (2.08%)	0	0	0	0	1	1	0	0
31.1	cell.organisation	2 (2.08%)	1	0	0	1	0	0	0	0
33	development	2 (2.08%)	0	0	0	0	0	0	1	1
33.99	development.unspecified	2 (2.08%)	0	0	0	0	0	0	1	1
34	transport	2 (2.08%)	0	1	0	0	1	0	0	0
10.5	cell wall.cell wall proteins	1 (1.04%)	1	0	0	0	0	0	0	0
10.5.1	cell wall.cell wall proteins.AGPs	1 (1.04%)	1	0	0	0	0	0	0	0
10.5.1.1	cell wall.cell wall proteins.AGPs.AGP	1 (1.04%)	1	0	0	0	0	0	0	0
10.7	cell wall.modification	1 (1.04%)	0	1	0	0	0	0	0	0
11.9.3.2	lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase	1 (1.04%)	0	0	0	1	0	0	0	0
17.2	hormone metabolism.auxin	1 (1.04%)	0	0	0	0	0	0	1	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (1.04%)	0	0	0	0	0	0	1	0
23	nucleotide metabolism	1 (1.04%)	1	0	0	0	0	0	0	0
23.3	nucleotide metabolism.salvage	1 (1.04%)	1	0	0	0	0	0	0	0
23.3.3	nucleotide metabolism.salvage.NUDIX hydrolases	1 (1.04%)	1	0	0	0	0	0	0	0
26.10	misc.cytochrome P450	1 (1.04%)	1	0	0	0	0	0	0	0
26.13	misc.acid and other phosphatases	1 (1.04%)	0	0	0	1	0	0	0	0
26.18	misc.invertase/pectin methylesterase inhibitor family protein	1 (1.04%)	1	0	0	0	0	0	0	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	1 (1.04%)	0	0	0	0	0	0	1	0
26.27	misc.calcineurin-like phosphoesterase family protein	1 (1.04%)	0	0	0	0	0	0	0	1
26.7	misc.oxidases - copper, flavone etc	1 (1.04%)	0	0	0	0	1	0	0	0
27.3.16	RNA.regulation of transcription.CCAAT box binding factor family, HAP5	1 (1.04%)	0	0	1	0	0	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (1.04%)	0	0	0	0	0	0	1	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (1.04%)	0	0	0	0	1	0	0	0
27.3.5	RNA.regulation of transcription.ARR	1 (1.04%)	0	0	0	0	1	0	0	0
27.3.57	RNA.regulation of transcription.JUMONJI family	1 (1.04%)	0	0	0	0	0	0	0	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (1.04%)	0	0	0	1	0	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (1.04%)	0	0	0	1	0	0	0	0
29.4	protein.postranslational modification	1 (1.04%)	0	0	0	0	1	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	1 (1.04%)	1	0	0	0	0	0	0	0
29.8	protein.assembly and cofactor ligation	1 (1.04%)	0	0	0	0	0	0	0	1
30.2	signalling.receptor kinases	1 (1.04%)	0	0	0	0	0	1	0	0
30.2.3	signalling.receptor kinases.leucine rich repeat III	1 (1.04%)	0	0	0	0	0	1	0	0
30.4	signalling.phosphinositides	1 (1.04%)	0	0	0	0	1	0	0	0
31.3	cell.cycle	1 (1.04%)	0	0	0	1	0	0	0	0
34.1	transport.p- and v-ATPases	1 (1.04%)	0	1	0	0	0	0	0	0
34.13	transport.peptides and oligopeptides	1 (1.04%)	0	0	0	0	1	0	0	0