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WorkbenchMapMan terms associated with a binding site
- Binding site
- Motif_407
- Name
- CE3OSOSEM
- Description
- CE3 (Coupling Element 3) found in the promoter of the rice Osem gene; Required for ABA-responsiveness and VP1 activation; Binding site of TRAB1; Motif A and CE3 are functionally equivalent; TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption
- #Associated genes
- 11
- #Associated MapMan terms
- 23
Click table-header(s) to enable sorting
| MapMan | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27 | RNA | 4 (36.36%) | 0 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 |
| 27.3 | RNA.regulation of transcription | 4 (36.36%) | 0 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 |
| 1 | PS | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 1.3 | PS.calvin cycle | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 1.3.6 | PS.calvin cycle.aldolase | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 10 | cell wall | 1 (9.09%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 10.6 | cell wall.degradation | 1 (9.09%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 10.6.3 | cell wall.degradation.pectate lyases and polygalacturonases | 1 (9.09%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 20 | stress | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 20.1 | stress.biotic | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 20.1.3 | stress.biotic.signalling | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 20.1.3.1 | stress.biotic.signalling.MLO-like | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 23 | nucleotide metabolism | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 23.3 | nucleotide metabolism.salvage | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 23.3.1 | nucleotide metabolism.salvage.phosphoribosyltransferases | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 23.3.1.3 | nucleotide metabolism.salvage.phosphoribosyltransferases.upp | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 27.3.11 | RNA.regulation of transcription.C2H2 zinc finger family | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 27.3.25 | RNA.regulation of transcription.MYB domain transcription factor family | 1 (9.09%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 27.3.35 | RNA.regulation of transcription.bZIP transcription factor family | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| 27.3.52 | RNA.regulation of transcription.Global transcription factor group | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 27.3.99 | RNA.regulation of transcription.unclassified | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 30 | signalling | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 30.8 | signalling.misc | 1 (9.09%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |