Gene Ontology terms associated with a binding site

Binding site
Motif_402
Name
AtTINY2
Description
Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana
#Associated genes
22
#Associated GO terms
308
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding21 (95.45%)1114622112
GO:1901363heterocyclic compound binding11 (50.00%)1012222001
GO:0097159organic cyclic compound binding11 (50.00%)1012222001
GO:0043167ion binding10 (45.45%)1110221110
GO:0003676nucleic acid binding10 (45.45%)1002222001
GO:0005515protein binding10 (45.45%)0013400002
GO:0043169cation binding9 (40.91%)1100221110
GO:0046872metal ion binding9 (40.91%)1100221110
GO:0003677DNA binding7 (31.82%)1002201001
GO:0001071nucleic acid binding transcription factor activity6 (27.27%)0002201001
GO:0043565sequence-specific DNA binding6 (27.27%)0002201001
GO:0003700sequence-specific DNA binding transcription factor activity6 (27.27%)0002201001
GO:0046983protein dimerization activity4 (18.18%)0001200001
GO:0046914transition metal ion binding4 (18.18%)0000021100
GO:0008270zinc ion binding4 (18.18%)0000021100
GO:0003824catalytic activity3 (13.64%)0011000001
GO:0016740transferase activity3 (13.64%)0011000001
GO:0042802identical protein binding2 (9.09%)0010000001
GO:0005524ATP binding1 (4.55%)0010000000
GO:0008170N-methyltransferase activity1 (4.55%)0000000001
GO:0008757S-adenosylmethionine-dependent methyltransferase activity1 (4.55%)0000000001
GO:0008194UDP-glycosyltransferase activity1 (4.55%)0001000000
GO:0016277[myelin basic protein]-arginine N-methyltransferase activity1 (4.55%)0000000001
GO:0030554adenyl nucleotide binding1 (4.55%)0010000000
GO:0032559adenyl ribonucleotide binding1 (4.55%)0010000000
GO:0043168anion binding1 (4.55%)0010000000
GO:0016273arginine N-methyltransferase activity1 (4.55%)0000000001
GO:0005516calmodulin binding1 (4.55%)0001000000
GO:0097367carbohydrate derivative binding1 (4.55%)0010000000
GO:0015020glucuronosyltransferase activity1 (4.55%)0001000000
GO:0042054histone methyltransferase activity1 (4.55%)0000000001
GO:0008469histone-arginine N-methyltransferase activity1 (4.55%)0000000001
GO:0016301kinase activity1 (4.55%)0010000000
GO:0008168methyltransferase activity1 (4.55%)0000000001
GO:0060089molecular transducer activity1 (4.55%)0010000000
GO:0001882nucleoside binding1 (4.55%)0010000000
GO:1901265nucleoside phosphate binding1 (4.55%)0010000000
GO:0000166nucleotide binding1 (4.55%)0010000000
GO:0016773phosphotransferase activity, alcohol group as acceptor1 (4.55%)0010000000
GO:0046982protein heterodimerization activity1 (4.55%)0000000001
GO:0042803protein homodimerization activity1 (4.55%)0000000001
GO:0004672protein kinase activity1 (4.55%)0010000000
GO:0008276protein methyltransferase activity1 (4.55%)0000000001
GO:0004674protein serine/threonine kinase activity1 (4.55%)0010000000
GO:0016274protein-arginine N-methyltransferase activity1 (4.55%)0000000001
GO:0035242protein-arginine omega-N asymmetric methyltransferase activity1 (4.55%)0000000001
GO:0035241protein-arginine omega-N monomethyltransferase activity1 (4.55%)0000000001
GO:0001883purine nucleoside binding1 (4.55%)0010000000
GO:0017076purine nucleotide binding1 (4.55%)0010000000
GO:0032550purine ribonucleoside binding1 (4.55%)0010000000
GO:0035639purine ribonucleoside triphosphate binding1 (4.55%)0010000000
GO:0032555purine ribonucleotide binding1 (4.55%)0010000000
GO:0004872receptor activity1 (4.55%)0010000000
GO:0005102receptor binding1 (4.55%)0010000000
GO:0033612receptor serine/threonine kinase binding1 (4.55%)0010000000
GO:0032549ribonucleoside binding1 (4.55%)0010000000
GO:0032553ribonucleotide binding1 (4.55%)0010000000
GO:0004871signal transducer activity1 (4.55%)0010000000
GO:0038023signaling receptor activity1 (4.55%)0010000000
GO:0036094small molecule binding1 (4.55%)0010000000
GO:0016757transferase activity, transferring glycosyl groups1 (4.55%)0001000000
GO:0016758transferase activity, transferring hexosyl groups1 (4.55%)0001000000
GO:0016741transferase activity, transferring one-carbon groups1 (4.55%)0000000001
GO:0016772transferase activity, transferring phosphorus-containing groups1 (4.55%)0010000000
GO:0019199transmembrane receptor protein kinase activity1 (4.55%)0010000000
GO:0004675transmembrane receptor protein serine/threonine kinase activity1 (4.55%)0010000000
GO:0004888transmembrane signaling receptor activity1 (4.55%)0010000000

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell7 (31.82%)1014000001
GO:0044464cell part7 (31.82%)1014000001
GO:0005622intracellular5 (22.73%)1003000001
GO:0043231intracellular membrane-bounded organelle5 (22.73%)1003000001
GO:0043229intracellular organelle5 (22.73%)1003000001
GO:0044424intracellular part5 (22.73%)1003000001
GO:0043227membrane-bounded organelle5 (22.73%)1003000001
GO:0043226organelle5 (22.73%)1003000001
GO:0005634nucleus4 (18.18%)1002000001
GO:0071944cell periphery2 (9.09%)0011000000
GO:0005737cytoplasm2 (9.09%)0001000001
GO:0016020membrane2 (9.09%)0011000000
GO:0005886plasma membrane2 (9.09%)0011000000
GO:0005794Golgi apparatus1 (4.55%)0001000000
GO:0044444cytoplasmic part1 (4.55%)0001000000
GO:0005768endosome1 (4.55%)0001000000
GO:0032991macromolecular complex1 (4.55%)0010000000
GO:0043234protein complex1 (4.55%)0010000000
GO:0005802trans-Golgi network1 (4.55%)0001000000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0044260cellular macromolecule metabolic process11 (50.00%)1014201002
GO:0044237cellular metabolic process11 (50.00%)1014201002
GO:0009987cellular process11 (50.00%)1014201002
GO:0043170macromolecule metabolic process11 (50.00%)1014201002
GO:0008152metabolic process11 (50.00%)1014201002
GO:0071704organic substance metabolic process11 (50.00%)1014201002
GO:0044238primary metabolic process11 (50.00%)1014201002
GO:0065007biological regulation10 (45.45%)1013201002
GO:0050789regulation of biological process10 (45.45%)1013201002
GO:0009058biosynthetic process9 (40.91%)1004201001
GO:0044249cellular biosynthetic process9 (40.91%)1004201001
GO:0034645cellular macromolecule biosynthetic process9 (40.91%)1004201001
GO:0009059macromolecule biosynthetic process9 (40.91%)1004201001
GO:1901576organic substance biosynthetic process9 (40.91%)1004201001
GO:0050794regulation of cellular process9 (40.91%)1013201001
GO:0032774RNA biosynthetic process8 (36.36%)1003201001
GO:0016070RNA metabolic process8 (36.36%)1003201001
GO:0019438aromatic compound biosynthetic process8 (36.36%)1003201001
GO:0006725cellular aromatic compound metabolic process8 (36.36%)1003201001
GO:0044271cellular nitrogen compound biosynthetic process8 (36.36%)1003201001
GO:0034641cellular nitrogen compound metabolic process8 (36.36%)1003201001
GO:0010467gene expression8 (36.36%)1003201001
GO:0018130heterocycle biosynthetic process8 (36.36%)1003201001
GO:0046483heterocycle metabolic process8 (36.36%)1003201001
GO:0006807nitrogen compound metabolic process8 (36.36%)1003201001
GO:0090304nucleic acid metabolic process8 (36.36%)1003201001
GO:0034654nucleobase-containing compound biosynthetic process8 (36.36%)1003201001
GO:0006139nucleobase-containing compound metabolic process8 (36.36%)1003201001
GO:1901362organic cyclic compound biosynthetic process8 (36.36%)1003201001
GO:1901360organic cyclic compound metabolic process8 (36.36%)1003201001
GO:2001141regulation of RNA biosynthetic process8 (36.36%)1003201001
GO:0051252regulation of RNA metabolic process8 (36.36%)1003201001
GO:0009889regulation of biosynthetic process8 (36.36%)1003201001
GO:0031326regulation of cellular biosynthetic process8 (36.36%)1003201001
GO:2000112regulation of cellular macromolecule biosynthetic process8 (36.36%)1003201001
GO:0031323regulation of cellular metabolic process8 (36.36%)1003201001
GO:0010468regulation of gene expression8 (36.36%)1003201001
GO:0010556regulation of macromolecule biosynthetic process8 (36.36%)1003201001
GO:0060255regulation of macromolecule metabolic process8 (36.36%)1003201001
GO:0019222regulation of metabolic process8 (36.36%)1003201001
GO:0051171regulation of nitrogen compound metabolic process8 (36.36%)1003201001
GO:0019219regulation of nucleobase-containing compound metabolic process8 (36.36%)1003201001
GO:0080090regulation of primary metabolic process8 (36.36%)1003201001
GO:0006355regulation of transcription, DNA-dependent8 (36.36%)1003201001
GO:0006351transcription, DNA-templated8 (36.36%)1003201001
GO:0050896response to stimulus5 (22.73%)1012000001
GO:0044699single-organism process5 (22.73%)1012000001
GO:0071840cellular component organization or biogenesis4 (18.18%)1011000001
GO:0032502developmental process4 (18.18%)1011000001
GO:0007275multicellular organismal development4 (18.18%)1011000001
GO:0032501multicellular organismal process4 (18.18%)1011000001
GO:0009791post-embryonic development4 (18.18%)1011000001
GO:0009628response to abiotic stimulus4 (18.18%)1002000001
GO:0009416response to light stimulus4 (18.18%)1002000001
GO:0009314response to radiation4 (18.18%)1002000001
GO:0044707single-multicellular organism process4 (18.18%)1011000001
GO:0044763single-organism cellular process4 (18.18%)1011000001
GO:0044767single-organism developmental process4 (18.18%)1011000001
GO:0048856anatomical structure development3 (13.64%)0011000001
GO:0016043cellular component organization3 (13.64%)1010000001
GO:0044267cellular protein metabolic process3 (13.64%)1010000001
GO:0006464cellular protein modification process3 (13.64%)1010000001
GO:0003006developmental process involved in reproduction3 (13.64%)0011000001
GO:0043412macromolecule modification3 (13.64%)1010000001
GO:0006996organelle organization3 (13.64%)1010000001
GO:0019538protein metabolic process3 (13.64%)1010000001
GO:0036211protein modification process3 (13.64%)1010000001
GO:0000003reproduction3 (13.64%)0011000001
GO:0022414reproductive process3 (13.64%)0011000001
GO:0048608reproductive structure development3 (13.64%)0011000001
GO:0061458reproductive system development3 (13.64%)0011000001
GO:0044702single organism reproductive process3 (13.64%)0011000001
GO:0044710single-organism metabolic process3 (13.64%)1001000001
GO:0048731system development3 (13.64%)0011000001
GO:0016568chromatin modification2 (9.09%)1000000001
GO:0006325chromatin organization2 (9.09%)1000000001
GO:0051276chromosome organization2 (9.09%)1000000001
GO:0016569covalent chromatin modification2 (9.09%)1000000001
GO:0009790embryo development2 (9.09%)0011000000
GO:0009793embryo development ending in seed dormancy2 (9.09%)0011000000
GO:0009908flower development2 (9.09%)0010000001
GO:0010154fruit development2 (9.09%)0011000000
GO:0016571histone methylation2 (9.09%)1000000001
GO:0016570histone modification2 (9.09%)1000000001
GO:0043414macromolecule methylation2 (9.09%)1000000001
GO:0032259methylation2 (9.09%)1000000001
GO:0048513organ development2 (9.09%)0011000000
GO:0008213protein alkylation2 (9.09%)1000000001
GO:0006479protein methylation2 (9.09%)1000000001
GO:0009411response to UV2 (9.09%)0001000001
GO:0010224response to UV-B2 (9.09%)0001000001
GO:0042221response to chemical2 (9.09%)0011000000
GO:0009719response to endogenous stimulus2 (9.09%)0011000000
GO:0009725response to hormone2 (9.09%)0011000000
GO:0080167response to karrikin2 (9.09%)0001000001
GO:0010033response to organic substance2 (9.09%)0011000000
GO:0048316seed development2 (9.09%)0011000000
GO:0048367shoot system development2 (9.09%)0010000001
GO:0007030Golgi organization1 (4.55%)0010000000
GO:0009838abscission1 (4.55%)0010000000
GO:0009742brassinosteroid mediated signaling pathway1 (4.55%)0010000000
GO:0016051carbohydrate biosynthetic process1 (4.55%)0001000000
GO:0005975carbohydrate metabolic process1 (4.55%)0001000000
GO:0007154cell communication1 (4.55%)0010000000
GO:0007049cell cycle1 (4.55%)0010000000
GO:0042546cell wall biogenesis1 (4.55%)0001000000
GO:0044038cell wall macromolecule biosynthetic process1 (4.55%)0001000000
GO:0044036cell wall macromolecule metabolic process1 (4.55%)0001000000
GO:0071554cell wall organization or biogenesis1 (4.55%)0001000000
GO:0070592cell wall polysaccharide biosynthetic process1 (4.55%)0001000000
GO:0010383cell wall polysaccharide metabolic process1 (4.55%)0001000000
GO:0034637cellular carbohydrate biosynthetic process1 (4.55%)0001000000
GO:0044262cellular carbohydrate metabolic process1 (4.55%)0001000000
GO:0044085cellular component biogenesis1 (4.55%)0001000000
GO:0070589cellular component macromolecule biosynthetic process1 (4.55%)0001000000
GO:0048869cellular developmental process1 (4.55%)0010000000
GO:0033692cellular polysaccharide biosynthetic process1 (4.55%)0001000000
GO:0044264cellular polysaccharide metabolic process1 (4.55%)0001000000
GO:0048610cellular process involved in reproduction1 (4.55%)0010000000
GO:0097306cellular response to alcohol1 (4.55%)0010000000
GO:0071367cellular response to brassinosteroid stimulus1 (4.55%)0010000000
GO:0070887cellular response to chemical stimulus1 (4.55%)0010000000
GO:0071495cellular response to endogenous stimulus1 (4.55%)0010000000
GO:0032870cellular response to hormone stimulus1 (4.55%)0010000000
GO:0071396cellular response to lipid1 (4.55%)0010000000
GO:0071407cellular response to organic cyclic compound1 (4.55%)0010000000
GO:0071310cellular response to organic substance1 (4.55%)0010000000
GO:1901701cellular response to oxygen-containing compound1 (4.55%)0010000000
GO:0071383cellular response to steroid hormone stimulus1 (4.55%)0010000000
GO:0051716cellular response to stimulus1 (4.55%)0010000000
GO:0010588cotyledon vascular tissue pattern formation1 (4.55%)0001000000
GO:0010388cullin deneddylation1 (4.55%)1000000000
GO:0021700developmental maturation1 (4.55%)0010000000
GO:0010227floral organ abscission1 (4.55%)0010000000
GO:0048437floral organ development1 (4.55%)0010000000
GO:0048229gametophyte development1 (4.55%)0010000000
GO:0009630gravitropism1 (4.55%)0001000000
GO:0010410hemicellulose metabolic process1 (4.55%)0001000000
GO:0034971histone H3-R17 methylation1 (4.55%)0000000001
GO:0034970histone H3-R2 methylation1 (4.55%)0000000001
GO:0034972histone H3-R26 methylation1 (4.55%)0000000001
GO:0034969histone arginine methylation1 (4.55%)0000000001
GO:0009755hormone-mediated signaling pathway1 (4.55%)0010000000
GO:0051321meiotic cell cycle1 (4.55%)0010000000
GO:0009556microsporogenesis1 (4.55%)0010000000
GO:0007389pattern specification process1 (4.55%)0001000000
GO:0018193peptidyl-amino acid modification1 (4.55%)0000000001
GO:0035246peptidyl-arginine N-methylation1 (4.55%)0000000001
GO:0018216peptidyl-arginine methylation1 (4.55%)0000000001
GO:0019919peptidyl-arginine methylation, to asymmetrical-dimethyl arginine1 (4.55%)0000000001
GO:0018195peptidyl-arginine modification1 (4.55%)0000000001
GO:0035247peptidyl-arginine omega-N-methylation1 (4.55%)0000000001
GO:0006796phosphate-containing compound metabolic process1 (4.55%)0010000000
GO:0006793phosphorus metabolic process1 (4.55%)0010000000
GO:0016310phosphorylation1 (4.55%)0010000000
GO:0009640photomorphogenesis1 (4.55%)1000000000
GO:0009832plant-type cell wall biogenesis1 (4.55%)0001000000
GO:0071669plant-type cell wall organization or biogenesis1 (4.55%)0001000000
GO:0048236plant-type spore development1 (4.55%)0010000000
GO:0009555pollen development1 (4.55%)0010000000
GO:0010152pollen maturation1 (4.55%)0010000000
GO:0000271polysaccharide biosynthetic process1 (4.55%)0001000000
GO:0005976polysaccharide metabolic process1 (4.55%)0001000000
GO:0051254positive regulation of RNA metabolic process1 (4.55%)1000000000
GO:0048518positive regulation of biological process1 (4.55%)1000000000
GO:0009891positive regulation of biosynthetic process1 (4.55%)1000000000
GO:0031328positive regulation of cellular biosynthetic process1 (4.55%)1000000000
GO:0031325positive regulation of cellular metabolic process1 (4.55%)1000000000
GO:0048522positive regulation of cellular process1 (4.55%)1000000000
GO:0010628positive regulation of gene expression1 (4.55%)1000000000
GO:0010557positive regulation of macromolecule biosynthetic process1 (4.55%)1000000000
GO:0010604positive regulation of macromolecule metabolic process1 (4.55%)1000000000
GO:0009893positive regulation of metabolic process1 (4.55%)1000000000
GO:0051173positive regulation of nitrogen compound metabolic process1 (4.55%)1000000000
GO:0045935positive regulation of nucleobase-containing compound metabolic process1 (4.55%)1000000000
GO:0045893positive regulation of transcription, DNA-dependent1 (4.55%)1000000000
GO:0048569post-embryonic organ development1 (4.55%)0010000000
GO:0043687post-translational protein modification1 (4.55%)1000000000
GO:0046777protein autophosphorylation1 (4.55%)0010000000
GO:0000338protein deneddylation1 (4.55%)1000000000
GO:0016579protein deubiquitination1 (4.55%)1000000000
GO:0032446protein modification by small protein conjugation1 (4.55%)1000000000
GO:0070647protein modification by small protein conjugation or removal1 (4.55%)1000000000
GO:0070646protein modification by small protein removal1 (4.55%)1000000000
GO:0006468protein phosphorylation1 (4.55%)0010000000
GO:0016567protein ubiquitination1 (4.55%)1000000000
GO:0003002regionalization1 (4.55%)0001000000
GO:0050793regulation of developmental process1 (4.55%)0000000001
GO:0009909regulation of flower development1 (4.55%)0000000001
GO:2000026regulation of multicellular organismal development1 (4.55%)0000000001
GO:0051239regulation of multicellular organismal process1 (4.55%)0000000001
GO:0048580regulation of post-embryonic development1 (4.55%)0000000001
GO:2000241regulation of reproductive process1 (4.55%)0000000001
GO:0048831regulation of shoot system development1 (4.55%)0000000001
GO:0009646response to absence of light1 (4.55%)0001000000
GO:0097305response to alcohol1 (4.55%)0010000000
GO:0009733response to auxin1 (4.55%)0001000000
GO:0009741response to brassinosteroid1 (4.55%)0010000000
GO:0009605response to external stimulus1 (4.55%)0001000000
GO:0009629response to gravity1 (4.55%)0001000000
GO:0009642response to light intensity1 (4.55%)0001000000
GO:0033993response to lipid1 (4.55%)0010000000
GO:0014070response to organic cyclic compound1 (4.55%)0010000000
GO:1901700response to oxygen-containing compound1 (4.55%)0010000000
GO:0009639response to red or far red light1 (4.55%)1000000000
GO:0048545response to steroid hormone1 (4.55%)0010000000
GO:0048364root development1 (4.55%)0001000000
GO:0022622root system development1 (4.55%)0001000000
GO:0009834secondary cell wall biogenesis1 (4.55%)0001000000
GO:0007165signal transduction1 (4.55%)0010000000
GO:0023052signaling1 (4.55%)0010000000
GO:0044700single organism signaling1 (4.55%)0010000000
GO:0044711single-organism biosynthetic process1 (4.55%)0001000000
GO:0044723single-organism carbohydrate metabolic process1 (4.55%)0001000000
GO:0009647skotomorphogenesis1 (4.55%)0001000000
GO:0010262somatic embryogenesis1 (4.55%)0001000000
GO:0043401steroid hormone mediated signaling pathway1 (4.55%)0010000000
GO:0009606tropism1 (4.55%)0001000000
GO:0010228vegetative to reproductive phase transition of meristem1 (4.55%)0000000001
GO:0045492xylan biosynthetic process1 (4.55%)0001000000
GO:0045491xylan metabolic process1 (4.55%)0001000000
GO:0010051xylem and phloem pattern formation1 (4.55%)0001000000