Gene Ontology terms associated with a binding site

Binding site
Motif_374
Name
HY5
Description
Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression
#Associated genes
17
#Associated GO terms
292
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

Click table-header(s) to enable sorting
GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding16 (94.12%)0002234005
GO:0097159organic cyclic compound binding11 (64.71%)0001223003
GO:1901363heterocyclic compound binding10 (58.82%)0001213003
GO:0003677DNA binding9 (52.94%)0001212003
GO:0003676nucleic acid binding9 (52.94%)0001212003
GO:0005515protein binding7 (41.18%)0001121002
GO:0001071nucleic acid binding transcription factor activity5 (29.41%)0000112001
GO:0003700sequence-specific DNA binding transcription factor activity5 (29.41%)0000112001
GO:0043167ion binding4 (23.53%)0001011001
GO:0043565sequence-specific DNA binding4 (23.53%)0000102001
GO:0003824catalytic activity3 (17.65%)0001001001
GO:0043168anion binding2 (11.76%)0000011000
GO:0043169cation binding2 (11.76%)0001000001
GO:0046872metal ion binding2 (11.76%)0001000001
GO:0036094small molecule binding2 (11.76%)0000011000
GO:0005524ATP binding1 (5.88%)0000001000
GO:0016881acid-amino acid ligase activity1 (5.88%)0000000001
GO:0030554adenyl nucleotide binding1 (5.88%)0000001000
GO:0032559adenyl ribonucleotide binding1 (5.88%)0000001000
GO:0005509calcium ion binding1 (5.88%)0001000000
GO:0005516calmodulin binding1 (5.88%)0000000001
GO:0097367carbohydrate derivative binding1 (5.88%)0000001000
GO:0031406carboxylic acid binding1 (5.88%)0000010000
GO:0003682chromatin binding1 (5.88%)0000000001
GO:0015036disulfide oxidoreductase activity1 (5.88%)0001000000
GO:0009055electron carrier activity1 (5.88%)0001000000
GO:0016301kinase activity1 (5.88%)0000001000
GO:0016874ligase activity1 (5.88%)0000000001
GO:0016879ligase activity, forming carbon-nitrogen bonds1 (5.88%)0000000001
GO:0033293monocarboxylic acid binding1 (5.88%)0000010000
GO:0001882nucleoside binding1 (5.88%)0000001000
GO:1901265nucleoside phosphate binding1 (5.88%)0000001000
GO:0000166nucleotide binding1 (5.88%)0000001000
GO:0043177organic acid binding1 (5.88%)0000010000
GO:0016491oxidoreductase activity1 (5.88%)0001000000
GO:0016667oxidoreductase activity, acting on a sulfur group of donors1 (5.88%)0001000000
GO:0016773phosphotransferase activity, alcohol group as acceptor1 (5.88%)0000001000
GO:0015035protein disulfide oxidoreductase activity1 (5.88%)0001000000
GO:0004672protein kinase activity1 (5.88%)0000001000
GO:0004674protein serine/threonine kinase activity1 (5.88%)0000001000
GO:0001883purine nucleoside binding1 (5.88%)0000001000
GO:0017076purine nucleotide binding1 (5.88%)0000001000
GO:0032550purine ribonucleoside binding1 (5.88%)0000001000
GO:0035639purine ribonucleoside triphosphate binding1 (5.88%)0000001000
GO:0032555purine ribonucleotide binding1 (5.88%)0000001000
GO:0032549ribonucleoside binding1 (5.88%)0000001000
GO:0032553ribonucleotide binding1 (5.88%)0000001000
GO:1901149salicylic acid binding1 (5.88%)0000010000
GO:0019787small conjugating protein ligase activity1 (5.88%)0000000001
GO:0016740transferase activity1 (5.88%)0000001000
GO:0016772transferase activity, transferring phosphorus-containing groups1 (5.88%)0000001000
GO:0046914transition metal ion binding1 (5.88%)0000000001
GO:0004842ubiquitin-protein ligase activity1 (5.88%)0000000001
GO:0008270zinc ion binding1 (5.88%)0000000001

Biological Process (back to top)

Click table-header(s) to enable sorting
GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process12 (70.59%)0002123004
GO:0065007biological regulation11 (64.71%)0002123003
GO:0050789regulation of biological process11 (64.71%)0002123003
GO:0050794regulation of cellular process11 (64.71%)0002123003
GO:0044260cellular macromolecule metabolic process10 (58.82%)0001113004
GO:0044237cellular metabolic process10 (58.82%)0001113004
GO:0043170macromolecule metabolic process10 (58.82%)0001113004
GO:0008152metabolic process10 (58.82%)0001113004
GO:0071704organic substance metabolic process10 (58.82%)0001113004
GO:0044238primary metabolic process10 (58.82%)0001113004
GO:0032774RNA biosynthetic process9 (52.94%)0001113003
GO:0016070RNA metabolic process9 (52.94%)0001113003
GO:0019438aromatic compound biosynthetic process9 (52.94%)0001113003
GO:0009058biosynthetic process9 (52.94%)0001113003
GO:0006725cellular aromatic compound metabolic process9 (52.94%)0001113003
GO:0044249cellular biosynthetic process9 (52.94%)0001113003
GO:0034645cellular macromolecule biosynthetic process9 (52.94%)0001113003
GO:0044271cellular nitrogen compound biosynthetic process9 (52.94%)0001113003
GO:0034641cellular nitrogen compound metabolic process9 (52.94%)0001113003
GO:0010467gene expression9 (52.94%)0001113003
GO:0018130heterocycle biosynthetic process9 (52.94%)0001113003
GO:0046483heterocycle metabolic process9 (52.94%)0001113003
GO:0009059macromolecule biosynthetic process9 (52.94%)0001113003
GO:0006807nitrogen compound metabolic process9 (52.94%)0001113003
GO:0090304nucleic acid metabolic process9 (52.94%)0001113003
GO:0034654nucleobase-containing compound biosynthetic process9 (52.94%)0001113003
GO:0006139nucleobase-containing compound metabolic process9 (52.94%)0001113003
GO:1901362organic cyclic compound biosynthetic process9 (52.94%)0001113003
GO:1901360organic cyclic compound metabolic process9 (52.94%)0001113003
GO:1901576organic substance biosynthetic process9 (52.94%)0001113003
GO:2001141regulation of RNA biosynthetic process9 (52.94%)0001113003
GO:0051252regulation of RNA metabolic process9 (52.94%)0001113003
GO:0009889regulation of biosynthetic process9 (52.94%)0001113003
GO:0031326regulation of cellular biosynthetic process9 (52.94%)0001113003
GO:2000112regulation of cellular macromolecule biosynthetic process9 (52.94%)0001113003
GO:0031323regulation of cellular metabolic process9 (52.94%)0001113003
GO:0010468regulation of gene expression9 (52.94%)0001113003
GO:0010556regulation of macromolecule biosynthetic process9 (52.94%)0001113003
GO:0060255regulation of macromolecule metabolic process9 (52.94%)0001113003
GO:0019222regulation of metabolic process9 (52.94%)0001113003
GO:0051171regulation of nitrogen compound metabolic process9 (52.94%)0001113003
GO:0019219regulation of nucleobase-containing compound metabolic process9 (52.94%)0001113003
GO:0080090regulation of primary metabolic process9 (52.94%)0001113003
GO:0006355regulation of transcription, DNA-dependent9 (52.94%)0001113003
GO:0006351transcription, DNA-templated9 (52.94%)0001113003
GO:0050896response to stimulus8 (47.06%)0002111003
GO:0044699single-organism process8 (47.06%)0002212001
GO:0042221response to chemical7 (41.18%)0001111003
GO:0009719response to endogenous stimulus7 (41.18%)0001111003
GO:0010033response to organic substance7 (41.18%)0001111003
GO:1901700response to oxygen-containing compound7 (41.18%)0001111003
GO:0006950response to stress7 (41.18%)0002111002
GO:0044763single-organism cellular process6 (35.29%)0001112001
GO:0009725response to hormone5 (29.41%)0001111001
GO:0007154cell communication4 (23.53%)0000111001
GO:0051716cellular response to stimulus4 (23.53%)0000111001
GO:0006952defense response4 (23.53%)0000111001
GO:0042742defense response to bacterium4 (23.53%)0000111001
GO:0098542defense response to other organism4 (23.53%)0000111001
GO:0051704multi-organism process4 (23.53%)0000111001
GO:0009617response to bacterium4 (23.53%)0000111001
GO:0009607response to biotic stimulus4 (23.53%)0000111001
GO:0051707response to other organism4 (23.53%)0000111001
GO:0048856anatomical structure development3 (17.65%)0001100001
GO:0070887cellular response to chemical stimulus3 (17.65%)0000111000
GO:0071495cellular response to endogenous stimulus3 (17.65%)0000111000
GO:0032870cellular response to hormone stimulus3 (17.65%)0000111000
GO:0071395cellular response to jasmonic acid stimulus3 (17.65%)0000111000
GO:0071310cellular response to organic substance3 (17.65%)0000111000
GO:1901701cellular response to oxygen-containing compound3 (17.65%)0000111000
GO:0050832defense response to fungus3 (17.65%)0000111000
GO:0032502developmental process3 (17.65%)0001100001
GO:0009755hormone-mediated signaling pathway3 (17.65%)0000111000
GO:0009867jasmonic acid mediated signaling pathway3 (17.65%)0000111000
GO:0007275multicellular organismal development3 (17.65%)0001100001
GO:0032501multicellular organismal process3 (17.65%)0001100001
GO:0009620response to fungus3 (17.65%)0000111000
GO:0009753response to jasmonic acid3 (17.65%)0000111000
GO:0007165signal transduction3 (17.65%)0000111000
GO:0023052signaling3 (17.65%)0000111000
GO:0044700single organism signaling3 (17.65%)0000111000
GO:0044707single-multicellular organism process3 (17.65%)0001100001
GO:0044767single-organism developmental process3 (17.65%)0001100001
GO:0048731system development3 (17.65%)0001100001
GO:0044267cellular protein metabolic process2 (11.76%)0000001001
GO:0006464cellular protein modification process2 (11.76%)0000001001
GO:0009816defense response to bacterium, incompatible interaction2 (11.76%)0000010001
GO:0009814defense response, incompatible interaction2 (11.76%)0000010001
GO:0006955immune response2 (11.76%)0000010001
GO:0002376immune system process2 (11.76%)0000010001
GO:0045087innate immune response2 (11.76%)0000010001
GO:0043412macromolecule modification2 (11.76%)0000001001
GO:0048513organ development2 (11.76%)0001000001
GO:0048518positive regulation of biological process2 (11.76%)0000011000
GO:0019538protein metabolic process2 (11.76%)0000001001
GO:0036211protein modification process2 (11.76%)0000001001
GO:0065008regulation of biological quality2 (11.76%)0001010000
GO:0009628response to abiotic stimulus2 (11.76%)0002000000
GO:0009737response to abscisic acid2 (11.76%)0001000001
GO:0097305response to alcohol2 (11.76%)0001000001
GO:0010200response to chitin2 (11.76%)0000000002
GO:0033993response to lipid2 (11.76%)0001000001
GO:1901698response to nitrogen compound2 (11.76%)0000000002
GO:0010243response to organonitrogen compound2 (11.76%)0000000002
GO:0006970response to osmotic stress2 (11.76%)0002000000
GO:0009651response to salt stress2 (11.76%)0002000000
GO:0007568aging1 (5.88%)0001000000
GO:0045454cell redox homeostasis1 (5.88%)0001000000
GO:0016043cellular component organization1 (5.88%)0000001000
GO:0071840cellular component organization or biogenesis1 (5.88%)0000001000
GO:0019725cellular homeostasis1 (5.88%)0001000000
GO:0071496cellular response to external stimulus1 (5.88%)0000000001
GO:0031668cellular response to extracellular stimulus1 (5.88%)0000000001
GO:0031669cellular response to nutrient levels1 (5.88%)0000000001
GO:0071407cellular response to organic cyclic compound1 (5.88%)0000010000
GO:0016036cellular response to phosphate starvation1 (5.88%)0000000001
GO:0071446cellular response to salicylic acid stimulus1 (5.88%)0000010000
GO:0009267cellular response to starvation1 (5.88%)0000000001
GO:0033554cellular response to stress1 (5.88%)0000000001
GO:0009658chloroplast organization1 (5.88%)0000001000
GO:0009817defense response to fungus, incompatible interaction1 (5.88%)0000010000
GO:0003006developmental process involved in reproduction1 (5.88%)0000100000
GO:0080185effector dependent induction by symbiont of host immune response1 (5.88%)0000010000
GO:0009790embryo development1 (5.88%)0000100000
GO:0009793embryo development ending in seed dormancy1 (5.88%)0000100000
GO:0010154fruit development1 (5.88%)0000100000
GO:0042592homeostatic process1 (5.88%)0001000000
GO:0006972hyperosmotic response1 (5.88%)0001000000
GO:0042538hyperosmotic salinity response1 (5.88%)0001000000
GO:0052558induction by organism of immune response of other organism involved in symbiotic interaction1 (5.88%)0000010000
GO:0052559induction by symbiont of host immune response1 (5.88%)0000010000
GO:0051701interaction with host1 (5.88%)0000010000
GO:0044419interspecies interaction between organisms1 (5.88%)0000010000
GO:0048366leaf development1 (5.88%)0001000000
GO:0010150leaf senescence1 (5.88%)0001000000
GO:0044003modification by symbiont of host morphology or physiology1 (5.88%)0000010000
GO:0035821modification of morphology or physiology of other organism1 (5.88%)0000010000
GO:0051817modification of morphology or physiology of other organism involved in symbiotic interaction1 (5.88%)0000010000
GO:0052255modulation by organism of defense response of other organism involved in symbiotic interaction1 (5.88%)0000010000
GO:0052552modulation by organism of immune response of other organism involved in symbiotic interaction1 (5.88%)0000010000
GO:0052031modulation by symbiont of host defense response1 (5.88%)0000010000
GO:0052553modulation by symbiont of host immune response1 (5.88%)0000010000
GO:0051253negative regulation of RNA metabolic process1 (5.88%)0001000000
GO:0048519negative regulation of biological process1 (5.88%)0001000000
GO:0009890negative regulation of biosynthetic process1 (5.88%)0001000000
GO:0031327negative regulation of cellular biosynthetic process1 (5.88%)0001000000
GO:2000113negative regulation of cellular macromolecule biosynthetic process1 (5.88%)0001000000
GO:0031324negative regulation of cellular metabolic process1 (5.88%)0001000000
GO:0048523negative regulation of cellular process1 (5.88%)0001000000
GO:0010629negative regulation of gene expression1 (5.88%)0001000000
GO:0010558negative regulation of macromolecule biosynthetic process1 (5.88%)0001000000
GO:0010605negative regulation of macromolecule metabolic process1 (5.88%)0001000000
GO:0009892negative regulation of metabolic process1 (5.88%)0001000000
GO:0051172negative regulation of nitrogen compound metabolic process1 (5.88%)0001000000
GO:0045934negative regulation of nucleobase-containing compound metabolic process1 (5.88%)0001000000
GO:0045892negative regulation of transcription, DNA-dependent1 (5.88%)0001000000
GO:0010260organ senescence1 (5.88%)0001000000
GO:0006996organelle organization1 (5.88%)0000001000
GO:0010087phloem or xylem histogenesis1 (5.88%)0001000000
GO:0006796phosphate-containing compound metabolic process1 (5.88%)0000001000
GO:0006793phosphorus metabolic process1 (5.88%)0000001000
GO:0016310phosphorylation1 (5.88%)0000001000
GO:0048827phyllome development1 (5.88%)0001000000
GO:0009657plastid organization1 (5.88%)0000001000
GO:0052555positive regulation by organism of immune response of other organism involved in symbiotic interaction1 (5.88%)0000010000
GO:0052556positive regulation by symbiont of host immune response1 (5.88%)0000010000
GO:0051254positive regulation of RNA metabolic process1 (5.88%)0000001000
GO:0009891positive regulation of biosynthetic process1 (5.88%)0000001000
GO:0031328positive regulation of cellular biosynthetic process1 (5.88%)0000001000
GO:0031325positive regulation of cellular metabolic process1 (5.88%)0000001000
GO:0048522positive regulation of cellular process1 (5.88%)0000001000
GO:0010628positive regulation of gene expression1 (5.88%)0000001000
GO:0050778positive regulation of immune response1 (5.88%)0000010000
GO:0002684positive regulation of immune system process1 (5.88%)0000010000
GO:0010557positive regulation of macromolecule biosynthetic process1 (5.88%)0000001000
GO:0010604positive regulation of macromolecule metabolic process1 (5.88%)0000001000
GO:0009893positive regulation of metabolic process1 (5.88%)0000001000
GO:0051173positive regulation of nitrogen compound metabolic process1 (5.88%)0000001000
GO:0045935positive regulation of nucleobase-containing compound metabolic process1 (5.88%)0000001000
GO:0048584positive regulation of response to stimulus1 (5.88%)0000010000
GO:0045893positive regulation of transcription, DNA-dependent1 (5.88%)0000001000
GO:0009791post-embryonic development1 (5.88%)0000100000
GO:0080022primary root development1 (5.88%)0000000001
GO:0046777protein autophosphorylation1 (5.88%)0000001000
GO:0032446protein modification by small protein conjugation1 (5.88%)0000000001
GO:0070647protein modification by small protein conjugation or removal1 (5.88%)0000000001
GO:0006468protein phosphorylation1 (5.88%)0000001000
GO:0016567protein ubiquitination1 (5.88%)0000000001
GO:0010646regulation of cell communication1 (5.88%)0000010000
GO:0031347regulation of defense response1 (5.88%)0000010000
GO:0050776regulation of immune response1 (5.88%)0000010000
GO:0002682regulation of immune system process1 (5.88%)0000010000
GO:2000022regulation of jasmonic acid mediated signaling pathway1 (5.88%)0000010000
GO:0048583regulation of response to stimulus1 (5.88%)0000010000
GO:0080134regulation of response to stress1 (5.88%)0000010000
GO:2000031regulation of salicylic acid mediated signaling pathway1 (5.88%)0000010000
GO:0009966regulation of signal transduction1 (5.88%)0000010000
GO:0023051regulation of signaling1 (5.88%)0000010000
GO:0000003reproduction1 (5.88%)0000100000
GO:0022414reproductive process1 (5.88%)0000100000
GO:0048608reproductive structure development1 (5.88%)0000100000
GO:0061458reproductive system development1 (5.88%)0000100000
GO:0052173response to defenses of other organism involved in symbiotic interaction1 (5.88%)0000010000
GO:0009605response to external stimulus1 (5.88%)0000000001
GO:0009991response to extracellular stimulus1 (5.88%)0000000001
GO:0075136response to host1 (5.88%)0000010000
GO:0052200response to host defenses1 (5.88%)0000010000
GO:0052572response to host immune response1 (5.88%)0000010000
GO:0052564response to immune response of other organism involved in symbiotic interaction1 (5.88%)0000010000
GO:0031667response to nutrient levels1 (5.88%)0000000001
GO:0014070response to organic cyclic compound1 (5.88%)0000010000
GO:0009751response to salicylic acid1 (5.88%)0000010000
GO:0042594response to starvation1 (5.88%)0000000001
GO:0048364root development1 (5.88%)0000000001
GO:0022622root system development1 (5.88%)0000000001
GO:0009863salicylic acid mediated signaling pathway1 (5.88%)0000010000
GO:0048316seed development1 (5.88%)0000100000
GO:0048367shoot system development1 (5.88%)0001000000
GO:0044702single organism reproductive process1 (5.88%)0000100000
GO:0044403symbiosis, encompassing mutualism through parasitism1 (5.88%)0000010000
GO:0009627systemic acquired resistance1 (5.88%)0000010000
GO:0009888tissue development1 (5.88%)0001000000
GO:0010089xylem development1 (5.88%)0001000000

Cellular Component (back to top)

Click table-header(s) to enable sorting
GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell4 (23.53%)0001010002
GO:0044464cell part4 (23.53%)0001010002
GO:0005622intracellular3 (17.65%)0001010001
GO:0044424intracellular part3 (17.65%)0001010001
GO:0043231intracellular membrane-bounded organelle2 (11.76%)0000010001
GO:0043229intracellular organelle2 (11.76%)0000010001
GO:0043227membrane-bounded organelle2 (11.76%)0000010001
GO:0005634nucleus2 (11.76%)0000010001
GO:0043226organelle2 (11.76%)0000010001
GO:0071944cell periphery1 (5.88%)0000000001
GO:0005737cytoplasm1 (5.88%)0001000000
GO:0044444cytoplasmic part1 (5.88%)0001000000
GO:0005829cytosol1 (5.88%)0001000000
GO:0016020membrane1 (5.88%)0000000001
GO:0005886plasma membrane1 (5.88%)0000000001