PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_368
Name: CBF1 BS in cor15a
Description: Determinants in the sequence specific binding of two plant transcription factors, CBF1 and NtERF2, to the DRE and GCC motifs

#Associated genes: 190
#Associated MapMan terms: 77

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	51 (26.84%)	4	6	6	9	10	8	4	4
27.3	RNA.regulation of transcription	48 (25.26%)	4	6	6	9	9	6	4	4
17	hormone metabolism	15 (7.89%)	0	1	2	2	2	2	1	5
30	signalling	14 (7.37%)	3	1	2	1	4	2	0	1
26	misc	12 (6.32%)	0	0	4	3	1	2	0	2
30.2	signalling.receptor kinases	12 (6.32%)	2	1	2	1	3	2	0	1
30.2.11	signalling.receptor kinases.leucine rich repeat XI	12 (6.32%)	2	1	2	1	3	2	0	1
17.5	hormone metabolism.ethylene	11 (5.79%)	0	1	1	1	2	2	1	3
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	11 (5.79%)	1	0	2	4	2	2	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	10 (5.26%)	0	1	1	1	2	1	1	3
17.5.1.1	hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase	10 (5.26%)	0	1	1	1	2	1	1	3
31	cell	9 (4.74%)	0	0	1	2	2	1	1	2
31.3	cell.cycle	9 (4.74%)	0	0	1	2	2	1	1	2
29	protein	8 (4.21%)	0	0	1	4	2	0	1	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	7 (3.68%)	1	2	3	0	0	0	1	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	7 (3.68%)	1	1	0	1	1	1	2	0
3	minor CHO metabolism	6 (3.16%)	0	0	1	2	0	1	1	1
3.2	minor CHO metabolism.trehalose	6 (3.16%)	0	0	1	2	0	1	1	1
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	6 (3.16%)	0	0	3	2	0	1	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	6 (3.16%)	1	2	0	2	0	1	0	0
33	development	6 (3.16%)	1	1	2	0	1	0	1	0
27.3.99	RNA.regulation of transcription.unclassified	5 (2.63%)	0	0	0	0	2	0	1	2
29.4	protein.postranslational modification	5 (2.63%)	0	0	0	2	2	0	1	0
33.99	development.unspecified	5 (2.63%)	1	1	1	0	1	0	1	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	4 (2.11%)	0	0	0	0	2	1	0	1
3.2.2	minor CHO metabolism.trehalose.TPP	4 (2.11%)	0	0	0	2	0	1	0	1
26.10	misc.cytochrome P450	3 (1.58%)	0	0	1	1	0	0	0	1
29.5	protein.degradation	3 (1.58%)	0	0	1	2	0	0	0	0
17.2	hormone metabolism.auxin	2 (1.05%)	0	0	1	1	0	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	2 (1.05%)	0	0	1	1	0	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	2 (1.05%)	0	0	1	0	0	1	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	2 (1.05%)	0	1	0	0	0	0	0	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	2 (1.05%)	0	0	0	0	2	0	0	0
27.4	RNA.RNA binding	2 (1.05%)	0	0	0	0	0	2	0	0
29.5.11	protein.degradation.ubiquitin	2 (1.05%)	0	0	0	2	0	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	2 (1.05%)	0	0	0	2	0	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	2 (1.05%)	0	0	1	1	0	0	0	0
3.2.3	minor CHO metabolism.trehalose.potential TPS/TPP	2 (1.05%)	0	0	1	0	0	0	1	0
10	cell wall	1 (0.53%)	1	0	0	0	0	0	0	0
10.6	cell wall.degradation	1 (0.53%)	1	0	0	0	0	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.53%)	1	0	0	0	0	0	0	0
13.1.3.4.12	amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase	1 (0.53%)	0	0	1	0	0	0	0	0
14	S-assimilation	1 (0.53%)	1	0	0	0	0	0	0	0
14.2	S-assimilation.APR	1 (0.53%)	1	0	0	0	0	0	0	0
16	secondary metabolism	1 (0.53%)	0	0	1	0	0	0	0	0
16.2	secondary metabolism.phenylpropanoids	1 (0.53%)	0	0	1	0	0	0	0	0
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	1 (0.53%)	0	0	1	0	0	0	0	0
16.2.1.3	secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL	1 (0.53%)	0	0	1	0	0	0	0	0
17.5.2	hormone metabolism.ethylene.signal transduction	1 (0.53%)	0	0	0	0	0	1	0	0
17.6	hormone metabolism.gibberelin	1 (0.53%)	0	0	0	0	0	0	0	1
17.6.2	hormone metabolism.gibberelin.signal transduction	1 (0.53%)	0	0	0	0	0	0	0	1
17.7	hormone metabolism.jasmonate	1 (0.53%)	0	0	0	0	0	0	0	1
17.7.3	hormone metabolism.jasmonate.induced-regulated-responsive-activated	1 (0.53%)	0	0	0	0	0	0	0	1
20	stress	1 (0.53%)	0	0	0	0	0	1	0	0
20.1	stress.biotic	1 (0.53%)	0	0	0	0	0	1	0	0
20.1.7	stress.biotic.PR-proteins	1 (0.53%)	0	0	0	0	0	1	0	0
21	redox	1 (0.53%)	0	0	0	0	0	1	0	0
21.1	redox.thioredoxin	1 (0.53%)	0	0	0	0	0	1	0	0
26.16	misc.myrosinases-lectin-jacalin	1 (0.53%)	0	0	0	0	0	0	0	1
26.21	misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	1 (0.53%)	0	0	0	0	1	0	0	0
26.24	misc.GCN5-related N-acetyltransferase	1 (0.53%)	0	0	0	0	0	1	0	0
27.1	RNA.processing	1 (0.53%)	0	0	0	0	1	0	0	0
27.1.1	RNA.processing.splicing	1 (0.53%)	0	0	0	0	1	0	0	0
27.3.2	RNA.regulation of transcription.Alfin-like	1 (0.53%)	0	0	0	1	0	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.53%)	0	0	0	1	0	0	0	0
29.2.1.2.2.2	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L2	1 (0.53%)	1	0	0	0	0	0	0	0
29.2.1.2.2.34	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34	1 (0.53%)	0	0	0	0	1	0	0	0
29.4.1	protein.postranslational modification.kinase	1 (0.53%)	0	0	0	1	0	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	1 (0.53%)	0	0	0	1	0	0	0	0
29.5.5	protein.degradation.serine protease	1 (0.53%)	0	0	1	0	0	0	0	0
3.2.1	minor CHO metabolism.trehalose.TPS	1 (0.53%)	0	0	0	0	0	0	1	0
30.3	signalling.calcium	1 (0.53%)	0	0	0	0	1	0	0	0
30.5	signalling.G-proteins	1 (0.53%)	1	0	0	0	0	0	0	0
33.1	development.storage proteins	1 (0.53%)	0	0	1	0	0	0	0	0
34	transport	1 (0.53%)	0	0	0	0	0	1	0	0
34.19	transport.Major Intrinsic Proteins	1 (0.53%)	0	0	0	0	0	1	0	0
34.19.1	transport.Major Intrinsic Proteins.PIP	1 (0.53%)	0	0	0	0	0	1	0	0