InterPro domains associated with a binding site

Binding site
Motif_356
Name
S2FSORPL21
Description
S2F binding site (S2 site) in spinach RPL21 gene encoding the plastid ribosomal protein L21; S2 site (CATACAWW) is conserved in promoter region of many nuclear genes encoding plastid proteins; Leaf-specific, light-independent regulatory element; S2 site is related to but different from the light-responsive GT-1 binding site
#Associated genes
103
#Associated InterPro terms
146

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InterPro Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
IPR000719Protein kinase domain8 (7.77%)2100302000
IPR011009Protein kinase-like domain8 (7.77%)2100302000
IPR016040NAD(P)-binding domain7 (6.80%)0001031002
IPR017441Protein kinase, ATP binding site7 (6.80%)2100202000
IPR008271Serine/threonine-protein kinase, active site7 (6.80%)2100202000
IPR027417P-loop containing nucleoside triphosphate hydrolase6 (5.83%)0000212001
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain6 (5.83%)2100201000
IPR020828Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain5 (4.85%)0001030001
IPR020829Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain5 (4.85%)0001030001
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase family5 (4.85%)0001030001
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal4 (3.88%)0000201001
IPR012562GUCT4 (3.88%)0000201001
IPR020830Glyceraldehyde 3-phosphate dehydrogenase, active site4 (3.88%)0001020001
IPR001650Helicase, C-terminal4 (3.88%)0000201001
IPR014001Helicase, superfamily 1/2, ATP-binding domain4 (3.88%)0000201001
IPR012677Nucleotide-binding, alpha-beta plait4 (3.88%)0010201000
IPR014014RNA helicase, DEAD-box type, Q motif4 (3.88%)0000201001
IPR000504RNA recognition motif domain4 (3.88%)0010201000
IPR021036Ribosomal protein S35, mitochondrial4 (3.88%)0000021001
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain4 (3.88%)1000201000
IPR011990Tetratricopeptide-like helical4 (3.88%)1010101000
IPR001878Zinc finger, CCHC-type4 (3.88%)0000201001
IPR016024Armadillo-type fold3 (2.91%)0000020001
IPR002885Pentatricopeptide repeat3 (2.91%)0010101000
IPR012336Thioredoxin-like fold3 (2.91%)0000011001
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant2 (1.94%)0000011000
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain2 (1.94%)0000200000
IPR013320Concanavalin A-like lectin/glucanase, subgroup2 (1.94%)1000001000
IPR022340G protein-coupled receptor GCR1 putative2 (1.94%)0011000000
IPR022343GCR1-cAMP receptor2 (1.94%)0011000000
IPR017981GPCR, family 2-like2 (1.94%)0011000000
IPR006424Glyceraldehyde-3-phosphate dehydrogenase, type I2 (1.94%)0001010000
IPR007125Histone core2 (1.94%)0000000110
IPR009072Histone-fold2 (1.94%)0000000110
IPR009036Molybdenum cofactor biosynthesis, MoeB2 (1.94%)0000001001
IPR003441NAC domain2 (1.94%)0000010001
IPR001258NHL repeat2 (1.94%)0000001001
IPR002483PWI domain2 (1.94%)0000200000
IPR019479Peroxiredoxin, C-terminal2 (1.94%)0000011000
IPR000528Plant lipid transfer protein/Par allergen2 (1.94%)0000200000
IPR002554Protein phosphatase 2A, regulatory B subunit, B562 (1.94%)0000020000
IPR011042Six-bladed beta-propeller, TolB-like2 (1.94%)0000001001
IPR000594UBA/THIF-type NAD/FAD binding fold2 (1.94%)0000001001
IPR0060582Fe-2S ferredoxin, iron-sulphur binding site1 (0.97%)0100000000
IPR0010412Fe-2S ferredoxin-type domain1 (0.97%)0100000000
IPR0011043-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal1 (0.97%)0100000000
IPR003593AAA+ ATPase domain1 (0.97%)0000001000
IPR001471AP2/ERF domain1 (0.97%)0000001000
IPR000850Adenylate kinase/UMP-CMP kinase1 (0.97%)0000010000
IPR013785Aldolase-type TIM barrel1 (0.97%)0000100000
IPR018244Allergen V5/Tpx-1-related, conserved site1 (0.97%)1000000000
IPR011989Armadillo-like helical1 (0.97%)0000000001
IPR012675Beta-grasp domain1 (0.97%)0100000000
IPR000923Blue (type 1) copper domain1 (0.97%)0000010000
IPR001235Blue (type 1) copper protein1 (0.97%)0000010000
IPR001487Bromodomain1 (0.97%)0000000010
IPR014044CAP domain1 (0.97%)1000000000
IPR006595CTLH, C-terminal LisH motif1 (0.97%)0001000000
IPR012416Calmodulin binding protein-like1 (0.97%)0000000001
IPR012725Chaperone DnaK1 (0.97%)0100000000
IPR014743Chloride channel, core1 (0.97%)0000000010
IPR001807Chloride channel, voltage gated1 (0.97%)0000000010
IPR028275Clustered mitochondria protein, N-terminal1 (0.97%)1000000000
IPR008011Complex 1 LYR protein1 (0.97%)0000000100
IPR008972Cupredoxin1 (0.97%)0000010000
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-related1 (0.97%)1000000000
IPR004022DDT domain1 (0.97%)0100000000
IPR018501DDT domain superfamily1 (0.97%)0100000000
IPR018500DDT domain, subgroup1 (0.97%)0100000000
IPR016177DNA-binding domain1 (0.97%)0000001000
IPR002775DNA/RNA-binding protein Alba-like1 (0.97%)0100000000
IPR005175Domain of unknown function DUF2961 (0.97%)0000001000
IPR005135Endonuclease/exonuclease/phosphatase1 (0.97%)0000010000
IPR005874Eukaryotic translation initiation factor SUI11 (0.97%)0000000010
IPR001810F-box domain1 (0.97%)0010000000
IPR010241Ferredoxin [2Fe-2S], plant1 (0.97%)0100000000
IPR017927Ferredoxin reductase-type FAD-binding domain1 (0.97%)0000100000
IPR015701Ferredoxin--NADP reductase1 (0.97%)0000100000
IPR001709Flavoprotein pyridine nucleotide cytochrome reductase1 (0.97%)0000100000
IPR023231GSKIP domain1 (0.97%)1000000000
IPR010987Glutathione S-transferase, C-terminal-like1 (0.97%)0000000001
IPR004045Glutathione S-transferase, N-terminal1 (0.97%)0000000001
IPR013126Heat shock protein 70 family1 (0.97%)0100000000
IPR018181Heat shock protein 70, conserved site1 (0.97%)0100000000
IPR009071High mobility group box domain1 (0.97%)0000001000
IPR013078Histidine phosphatase superfamily, clade-11 (0.97%)0000000001
IPR002119Histone H2A1 (0.97%)0000000100
IPR000558Histone H2B1 (0.97%)0000000010
IPR001356Homeobox domain1 (0.97%)0000100000
IPR017970Homeobox, conserved site1 (0.97%)0000100000
IPR009057Homeodomain-like1 (0.97%)0000100000
IPR000300Inositol polyphosphate-related phosphatase1 (0.97%)0000010000
IPR026868LYR motif-containing protein 21 (0.97%)0000000100
IPR003106Leucine zipper, homeobox-associated1 (0.97%)0000100000
IPR006553Leucine-rich repeat, cysteine-containing subtype1 (0.97%)0010000000
IPR006594LisH dimerisation motif1 (0.97%)0001000000
IPR001465Malate synthase1 (0.97%)0000010000
IPR006252Malate synthase A1 (0.97%)0000010000
IPR019830Malate synthase, conserved site1 (0.97%)0000010000
IPR011076Malate synthase-like1 (0.97%)0000010000
IPR003690Mitochodrial transcription termination factor-related1 (0.97%)0000100000
IPR016123Mog1/PsbP, alpha/beta/alpha sandwich1 (0.97%)0100000000
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain1 (0.97%)0000000001
IPR002182NB-ARC1 (0.97%)0000001000
IPR027353NET domain1 (0.97%)0000000010
IPR004393Nicotinate-nucleotide pyrophosphorylase1 (0.97%)0000100000
IPR012940Nucleic acid binding NABP1 (0.97%)0000000001
IPR003323Ovarian tumour, otubain1 (0.97%)0000001000
IPR001433Oxidoreductase FAD/NAD(P)-binding1 (0.97%)0000100000
IPR008333Oxidoreductase, FAD-binding domain1 (0.97%)0000100000
IPR008580PPPDE putative peptidase domain1 (0.97%)0000010000
IPR002343Paraneoplastic encephalomyelitis antigen1 (0.97%)0000001000
IPR012334Pectin lyase fold1 (0.97%)0000010000
IPR011050Pectin lyase fold/virulence factor1 (0.97%)0000010000
IPR018040Pectinesterase, active site1 (0.97%)0000010000
IPR000070Pectinesterase, catalytic1 (0.97%)0000010000
IPR002683Photosystem II PsbP, oxygen evolving complex1 (0.97%)0100000000
IPR002387Plastocyanin1 (0.97%)0000010000
IPR010721Protein of unknown function DUF12951 (0.97%)0100000000
IPR006734Protein of unknown function DUF5971 (0.97%)0000100000
IPR001313Pumilio RNA-binding repeat1 (0.97%)0000000001
IPR002638Quinolinate phosphoribosyl transferase, C-terminal1 (0.97%)0000100000
IPR022412Quinolinate phosphoribosyl transferase, N-terminal1 (0.97%)0000100000
IPR010742Rab5-interacting1 (0.97%)0000001000
IPR017938Riboflavin synthase-like beta-barrel1 (0.97%)0000100000
IPR010994RuvA domain 2-like1 (0.97%)0010000000
IPR019734Tetratricopeptide repeat1 (0.97%)1000000000
IPR013026Tetratricopeptide repeat-containing domain1 (0.97%)1000000000
IPR000157Toll/interleukin-1 receptor homology (TIR) domain1 (0.97%)0000001000
IPR027728Topless family1 (0.97%)0001000000
IPR005202Transcription factor GRAS1 (0.97%)0000010000
IPR001950Translation initiation factor SUI11 (0.97%)0000000010
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily1 (0.97%)0001000000
IPR015940Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote1 (0.97%)0000001000
IPR000608Ubiquitin-conjugating enzyme, E21 (0.97%)0000001000
IPR023313Ubiquitin-conjugating enzyme, active site1 (0.97%)0000001000
IPR016135Ubiquitin-conjugating enzyme/RWD-like1 (0.97%)0000001000
IPR008004Uncharacterised protein family UPF05031 (0.97%)0000010000
IPR008889VQ1 (0.97%)0001000000
IPR001680WD40 repeat1 (0.97%)0001000000
IPR019775WD40 repeat, conserved site1 (0.97%)0001000000
IPR017986WD40-repeat-containing domain1 (0.97%)0001000000
IPR015943WD40/YVTN repeat-like-containing domain1 (0.97%)0001000000
IPR013136WSTF/Acf1/Cbp1461 (0.97%)0100000000
IPR006780YABBY protein1 (0.97%)0000001000
IPR001876Zinc finger, RanBP2-type1 (0.97%)0000000001