PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_341
Name: NAM
Description: Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily

#Associated genes: 144
#Associated MapMan terms: 94

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	34 (23.61%)	0	3	2	11	4	8	3	3
27.3	RNA.regulation of transcription	31 (21.53%)	0	3	1	11	4	6	3	3
29	protein	11 (7.64%)	1	1	1	4	1	1	1	1
30	signalling	9 (6.25%)	0	0	1	3	2	1	2	0
17	hormone metabolism	8 (5.56%)	0	0	0	4	0	3	0	1
26	misc	8 (5.56%)	0	3	1	3	1	0	0	0
30.2	signalling.receptor kinases	5 (3.47%)	0	0	1	1	1	0	2	0
10	cell wall	4 (2.78%)	0	0	1	2	0	0	0	1
17.1	hormone metabolism.abscisic acid	4 (2.78%)	0	0	0	3	0	1	0	0
17.1.3	hormone metabolism.abscisic acid.induced-regulated-responsive-activated	4 (2.78%)	0	0	0	3	0	1	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	4 (2.78%)	0	1	0	0	1	1	1	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	4 (2.78%)	0	0	0	3	0	1	0	0
27.3.99	RNA.regulation of transcription.unclassified	4 (2.78%)	0	1	0	2	0	0	0	1
29.5	protein.degradation	4 (2.78%)	0	0	1	2	0	0	0	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	4 (2.78%)	0	0	1	0	0	1	0	2
29.2	protein.synthesis	3 (2.08%)	0	1	0	2	0	0	0	0
29.5.3	protein.degradation.cysteine protease	3 (2.08%)	0	0	1	2	0	0	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	3 (2.08%)	0	0	1	1	0	0	1	0
17.5	hormone metabolism.ethylene	2 (1.39%)	0	0	0	0	0	1	0	1
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	2 (1.39%)	0	0	0	0	0	1	0	1
26.7	misc.oxidases - copper, flavone etc	2 (1.39%)	0	0	0	2	0	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	2 (1.39%)	0	0	0	2	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	2 (1.39%)	0	0	0	1	0	0	0	1
27.3.40	RNA.regulation of transcription.Aux/IAA family	2 (1.39%)	0	0	0	0	2	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	2 (1.39%)	0	0	0	0	0	2	0	0
27.4	RNA.RNA binding	2 (1.39%)	0	0	1	0	0	1	0	0
28	DNA	2 (1.39%)	0	0	0	0	0	0	0	2
29.2.1.2.1.2	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2	2 (1.39%)	0	0	0	0	0	2	0	0
29.4	protein.postranslational modification	2 (1.39%)	1	0	0	0	0	1	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	2 (1.39%)	0	0	0	1	1	0	0	0
30.11	signalling.light	2 (1.39%)	0	0	0	0	1	1	0	0
30.2.17	signalling.receptor kinases.DUF 26	2 (1.39%)	0	0	0	0	1	0	1	0
30.3	signalling.calcium	2 (1.39%)	0	0	0	2	0	0	0	0
31	cell	2 (1.39%)	0	0	0	2	0	0	0	0
34	transport	2 (1.39%)	0	0	0	0	0	0	0	2
3	minor CHO metabolism	1 (0.69%)	0	0	1	0	0	0	0	0
3.1	minor CHO metabolism.raffinose family	1 (0.69%)	0	0	1	0	0	0	0	0
10.2	cell wall.cellulose synthesis	1 (0.69%)	0	0	1	0	0	0	0	0
10.5	cell wall.cell wall proteins	1 (0.69%)	0	0	0	0	0	0	0	1
10.5.2	cell wall.cell wall proteins.proline rich proteins	1 (0.69%)	0	0	0	0	0	0	0	1
10.7	cell wall.modification	1 (0.69%)	0	0	0	1	0	0	0	0
10.8	cell wall.pectin*esterases	1 (0.69%)	0	0	0	1	0	0	0	0
10.8.1	cell wall.pectin*esterases.PME	1 (0.69%)	0	0	0	1	0	0	0	0
11	lipid metabolism	1 (0.69%)	0	1	0	0	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.69%)	0	1	0	0	0	0	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.69%)	0	1	0	0	0	0	0	0
11.9.3.2	lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase	1 (0.69%)	0	1	0	0	0	0	0	0
17.2	hormone metabolism.auxin	1 (0.69%)	0	0	0	1	0	0	0	0
17.2.1	hormone metabolism.auxin.synthesis-degradation	1 (0.69%)	0	0	0	1	0	0	0	0
17.4	hormone metabolism.cytokinin	1 (0.69%)	0	0	0	0	0	1	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.69%)	0	0	0	0	0	1	0	0
20	stress	1 (0.69%)	0	0	0	1	0	0	0	0
20.2	stress.abiotic	1 (0.69%)	0	0	0	1	0	0	0	0
20.2.99	stress.abiotic.unspecified	1 (0.69%)	0	0	0	1	0	0	0	0
23	nucleotide metabolism	1 (0.69%)	0	1	0	0	0	0	0	0
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	1 (0.69%)	0	1	0	0	0	0	0	0
23.4.99	nucleotide metabolism.phosphotransfer and pyrophosphatases.misc	1 (0.69%)	0	1	0	0	0	0	0	0
26.1	misc.misc2	1 (0.69%)	0	1	0	0	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (0.69%)	0	0	1	0	0	0	0	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	1 (0.69%)	0	1	0	0	0	0	0	0
26.24	misc.GCN5-related N-acetyltransferase	1 (0.69%)	0	0	0	1	0	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.69%)	0	0	0	0	1	0	0	0
26.9	misc.glutathione S transferases	1 (0.69%)	0	1	0	0	0	0	0	0
27.1	RNA.processing	1 (0.69%)	0	0	0	0	0	1	0	0
27.1.1	RNA.processing.splicing	1 (0.69%)	0	0	0	0	0	1	0	0
27.3.10	RNA.regulation of transcription.C2C2(Zn) YABBY family	1 (0.69%)	0	0	0	0	0	1	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (0.69%)	0	1	0	0	0	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	1 (0.69%)	0	0	0	0	0	1	0	0
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	1 (0.69%)	0	0	0	1	0	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.69%)	0	0	0	0	1	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	1 (0.69%)	0	0	0	0	0	0	1	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.69%)	0	0	0	0	0	0	1	0
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	1 (0.69%)	0	0	1	0	0	0	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.69%)	0	0	0	0	0	0	0	1
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	1 (0.69%)	0	0	0	1	0	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.69%)	0	0	0	1	0	0	0	0
28.1	DNA.synthesis/chromatin structure	1 (0.69%)	0	0	0	0	0	0	0	1
28.99	DNA.unspecified	1 (0.69%)	0	0	0	0	0	0	0	1
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.69%)	0	0	0	1	0	0	0	0
29.2.3	protein.synthesis.initiation	1 (0.69%)	0	0	0	1	0	0	0	0
29.2.4	protein.synthesis.elongation	1 (0.69%)	0	1	0	0	0	0	0	0
29.3	protein.targeting	1 (0.69%)	0	0	0	0	1	0	0	0
29.3.1	protein.targeting.nucleus	1 (0.69%)	0	0	0	0	1	0	0	0
29.5.5	protein.degradation.serine protease	1 (0.69%)	0	0	0	0	0	0	0	1
29.8	protein.assembly and cofactor ligation	1 (0.69%)	0	0	0	0	0	0	1	0
3.1.1	minor CHO metabolism.raffinose family.galactinol synthases	1 (0.69%)	0	0	1	0	0	0	0	0
3.1.1.2	minor CHO metabolism.raffinose family.galactinol synthases.putative	1 (0.69%)	0	0	1	0	0	0	0	0
31.1	cell.organisation	1 (0.69%)	0	0	0	1	0	0	0	0
31.2	cell.division	1 (0.69%)	0	0	0	1	0	0	0	0
33	development	1 (0.69%)	0	0	0	0	0	0	0	1
33.99	development.unspecified	1 (0.69%)	0	0	0	0	0	0	0	1
34.30	transport.H+ transporting pyrophosphatase	1 (0.69%)	0	0	0	0	0	0	0	1
34.3	transport.amino acids	1 (0.69%)	0	0	0	0	0	0	0	1
34.7	transport.phosphate	1 (0.69%)	0	0	0	0	0	0	0	1