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WorkbenchMapMan terms associated with a binding site
- Binding site
- Motif_312
- Name
- OCTAMERMOTIFTAH3H4
- Description
- Octamer motif found in promoter of wheat histone genes H3 and H4, and corn histone genes H3 and H4; Arabidopsis histone H4; histone-specific octamer; About half of the Oct motifs are present together with another element, HexA, TCA or CCAAT-box, forming OCES (Oct-containing composite elements); Nucleotide sequences of two corn histone H3 genes. Genomic organization of the corn histone H3 and H4 genes
- #Associated genes
- 209
- #Associated MapMan terms
- 49
Click table-header(s) to enable sorting
| MapMan | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28 | DNA | 108 (51.67%) | 11 | 21 | 0 | 15 | 17 | 16 | 9 | 14 | 0 | 5 |
| 28.1 | DNA.synthesis/chromatin structure | 108 (51.67%) | 11 | 21 | 0 | 15 | 17 | 16 | 9 | 14 | 0 | 5 |
| 28.1.3 | DNA.synthesis/chromatin structure.histone | 108 (51.67%) | 11 | 21 | 0 | 15 | 17 | 16 | 9 | 14 | 0 | 5 |
| 28.1.3.2 | DNA.synthesis/chromatin structure.histone.core | 23 (11.00%) | 10 | 0 | 0 | 3 | 2 | 7 | 1 | 0 | 0 | 0 |
| 28.1.3.2.3 | DNA.synthesis/chromatin structure.histone.core.H3 | 16 (7.66%) | 3 | 0 | 0 | 3 | 2 | 7 | 1 | 0 | 0 | 0 |
| 29 | protein | 15 (7.18%) | 0 | 2 | 0 | 3 | 5 | 2 | 2 | 0 | 0 | 1 |
| 27 | RNA | 12 (5.74%) | 0 | 2 | 0 | 3 | 5 | 0 | 1 | 0 | 0 | 1 |
| 27.3 | RNA.regulation of transcription | 11 (5.26%) | 0 | 2 | 0 | 3 | 4 | 0 | 1 | 0 | 0 | 1 |
| 29.4 | protein.postranslational modification | 9 (4.31%) | 0 | 1 | 0 | 1 | 3 | 1 | 2 | 0 | 0 | 1 |
| 17 | hormone metabolism | 6 (2.87%) | 0 | 0 | 0 | 0 | 4 | 0 | 2 | 0 | 0 | 0 |
| 17.2 | hormone metabolism.auxin | 4 (1.91%) | 0 | 0 | 0 | 0 | 3 | 0 | 1 | 0 | 0 | 0 |
| 27.3.99 | RNA.regulation of transcription.unclassified | 4 (1.91%) | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 1 |
| 28.1.3.2.1 | DNA.synthesis/chromatin structure.histone.core.H2A | 4 (1.91%) | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 29.3 | protein.targeting | 3 (1.44%) | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| 34 | transport | 3 (1.44%) | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 |
| 34.20 | transport.porins | 3 (1.44%) | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 |
| 34.2 | transport.sugars | 3 (1.44%) | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 |
| 17.2.2 | hormone metabolism.auxin.signal transduction | 2 (0.96%) | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 |
| 17.2.3 | hormone metabolism.auxin.induced-regulated-responsive-activated | 2 (0.96%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
| 17.4 | hormone metabolism.cytokinin | 2 (0.96%) | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 |
| 27.3.29 | RNA.regulation of transcription.TCP transcription factor family | 2 (0.96%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
| 27.3.62 | RNA.regulation of transcription.Nucleosome/chromatin assembly factor group | 2 (0.96%) | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| 28.1.3.2.4 | DNA.synthesis/chromatin structure.histone.core.H4 | 2 (0.96%) | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 29.2 | protein.synthesis | 2 (0.96%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
| 29.2.3 | protein.synthesis.initiation | 2 (0.96%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
| 29.3.4 | protein.targeting.secretory pathway | 2 (0.96%) | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 29.5.11.4.2 | protein.degradation.ubiquitin.E3.RING | 2 (0.96%) | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| 33 | development | 2 (0.96%) | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| 33.99 | development.unspecified | 2 (0.96%) | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| 10 | cell wall | 1 (0.48%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 10.6 | cell wall.degradation | 1 (0.48%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 10.6.3 | cell wall.degradation.pectate lyases and polygalacturonases | 1 (0.48%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 17.4.1 | hormone metabolism.cytokinin.synthesis-degradation | 1 (0.48%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| 17.4.2 | hormone metabolism.cytokinin.signal transduction | 1 (0.48%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 27.3.17 | RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family | 1 (0.48%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 27.3.18 | RNA.regulation of transcription.E2F/DP transcription factor family | 1 (0.48%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| 27.3.32 | RNA.regulation of transcription.WRKY domain transcription factor family | 1 (0.48%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| 27.4 | RNA.RNA binding | 1 (0.48%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 28.1.3.1 | DNA.synthesis/chromatin structure.histone.H1 | 1 (0.48%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 28.1.3.2.2 | DNA.synthesis/chromatin structure.histone.core.H2B | 1 (0.48%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 29.2.1.2.1.27 | protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27 | 1 (0.48%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| 29.3.1 | protein.targeting.nucleus | 1 (0.48%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| 29.3.4.2 | protein.targeting.secretory pathway.golgi | 1 (0.48%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 29.3.4.3 | protein.targeting.secretory pathway.vacuole | 1 (0.48%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 29.5 | protein.degradation | 1 (0.48%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| 30 | signalling | 1 (0.48%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 30.3 | signalling.calcium | 1 (0.48%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 31 | cell | 1 (0.48%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 31.2 | cell.division | 1 (0.48%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |