PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_308
Name: SP8BFIBSP8AIB
Description: One of SPBF binding site (SP8a); Found at -155 of gSPO-A1 (sporamin) gene, and also at -880 of gB-Amy (beta-amylase) gene in sweet potato; SP8BF recognizes both SP8a and SP8b sequences; See also SP8BFIBSP8BIB; SP8BF activity is also found in tobacco; SP8a found in the 5' upstream region of three differnt genes coding for sporamin and beta-amylase; Binding site of SPF1; SPF1 also binds to the SP8b

#Associated genes: 216
#Associated MapMan terms: 104

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	44 (20.37%)	3	7	2	4	9	8	4	7
27.3	RNA.regulation of transcription	39 (18.06%)	2	6	2	4	9	6	3	7
29	protein	19 (8.80%)	0	2	0	6	6	0	1	4
26	misc	12 (5.56%)	3	1	0	3	2	1	0	2
20	stress	11 (5.09%)	1	1	2	2	2	2	0	1
20.2	stress.abiotic	10 (4.63%)	1	1	1	2	2	2	0	1
29.4	protein.postranslational modification	10 (4.63%)	0	2	0	3	2	0	1	2
20.2.1	stress.abiotic.heat	9 (4.17%)	1	1	1	2	2	1	0	1
34	transport	9 (4.17%)	0	0	1	2	5	1	0	0
30	signalling	8 (3.70%)	0	1	2	0	1	0	3	1
23	nucleotide metabolism	6 (2.78%)	0	0	0	1	1	3	1	0
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	6 (2.78%)	0	0	0	1	1	3	1	0
23.4.10	nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase	6 (2.78%)	0	0	0	1	1	3	1	0
33	development	6 (2.78%)	1	0	0	0	3	1	1	0
33.99	development.unspecified	6 (2.78%)	1	0	0	0	3	1	1	0
1	PS	5 (2.31%)	0	0	0	0	0	2	2	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	5 (2.31%)	1	0	1	1	0	1	1	0
27.3.99	RNA.regulation of transcription.unclassified	5 (2.31%)	0	0	0	0	3	0	0	2
3	minor CHO metabolism	4 (1.85%)	0	1	1	0	0	1	0	1
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	4 (1.85%)	0	2	0	0	1	1	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	4 (1.85%)	0	1	0	0	0	1	1	1
27.4	RNA.RNA binding	4 (1.85%)	1	1	0	0	0	2	0	0
29.2	protein.synthesis	4 (1.85%)	0	0	0	0	2	0	0	2
30.3	signalling.calcium	4 (1.85%)	0	0	1	0	0	0	2	1
31	cell	4 (1.85%)	0	0	0	1	1	1	0	1
34.16	transport.ABC transporters and multidrug resistance systems	4 (1.85%)	0	0	1	0	2	1	0	0
1.1	PS.lightreaction	3 (1.39%)	0	0	0	0	0	0	2	1
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	3 (1.39%)	0	0	0	0	0	0	2	1
26.4.1	misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase	3 (1.39%)	1	0	0	1	1	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	3 (1.39%)	0	0	0	2	0	0	0	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	3 (1.39%)	0	1	0	1	0	1	0	0
3.6	minor CHO metabolism.callose	3 (1.39%)	0	1	0	0	0	1	0	1
26.13	misc.acid and other phosphatases	3 (1.39%)	0	0	0	0	1	1	0	1
26.4	misc.beta 1,3 glucan hydrolases	3 (1.39%)	1	0	0	1	1	0	0	0
29.5	protein.degradation	3 (1.39%)	0	0	0	1	2	0	0	0
10	cell wall	2 (0.93%)	0	0	0	1	0	0	1	0
10.6	cell wall.degradation	2 (0.93%)	0	0	0	1	0	0	1	0
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases	2 (0.93%)	0	0	0	1	0	0	1	0
26.3	misc.gluco-, galacto- and mannosidases	2 (0.93%)	0	1	0	1	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	2 (0.93%)	0	1	0	0	1	0	0	0
27.3.60	RNA.regulation of transcription.NIN-like bZIP-related family	2 (0.93%)	0	0	0	0	1	0	0	1
27.3.67	RNA.regulation of transcription.putative transcription regulator	2 (0.93%)	0	0	0	0	1	0	1	0
27.3.68	RNA.regulation of transcription.PWWP domain protein	2 (0.93%)	0	0	0	0	0	1	0	1
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	2 (0.93%)	0	2	0	0	0	0	0	0
28	DNA	2 (0.93%)	0	0	0	2	0	0	0	0
28.1	DNA.synthesis/chromatin structure	2 (0.93%)	0	0	0	2	0	0	0	0
29.2.3	protein.synthesis.initiation	2 (0.93%)	0	0	0	0	2	0	0	0
29.4.1	protein.postranslational modification.kinase	2 (0.93%)	0	1	0	1	0	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	2 (0.93%)	0	1	0	1	0	0	0	0
29.5.11	protein.degradation.ubiquitin	2 (0.93%)	0	0	0	1	1	0	0	0
29.7	protein.glycosylation	2 (0.93%)	0	0	0	2	0	0	0	0
31.3	cell.cycle	2 (0.93%)	0	0	0	1	0	0	0	1
34.3	transport.amino acids	2 (0.93%)	0	0	0	2	0	0	0	0
34.8	transport.metabolite transporters at the envelope membrane	2 (0.93%)	0	0	0	0	2	0	0	0
1.2	PS.photorespiration	1 (0.46%)	0	0	0	0	0	1	0	0
1.2.2	PS.photorespiration.glycolate oxydase	1 (0.46%)	0	0	0	0	0	1	0	0
1.3	PS.calvin cycle	1 (0.46%)	0	0	0	0	0	1	0	0
1.3.12	PS.calvin cycle.PRK	1 (0.46%)	0	0	0	0	0	1	0	0
15	metal handling	1 (0.46%)	0	0	0	1	0	0	0	0
15.2	metal handling.binding, chelation and storage	1 (0.46%)	0	0	0	1	0	0	0	0
16	secondary metabolism	1 (0.46%)	0	0	0	0	0	1	0	0
16.2	secondary metabolism.phenylpropanoids	1 (0.46%)	0	0	0	0	0	1	0	0
17	hormone metabolism	1 (0.46%)	1	0	0	0	0	0	0	0
17.3	hormone metabolism.brassinosteroid	1 (0.46%)	1	0	0	0	0	0	0	0
17.3.2	hormone metabolism.brassinosteroid.signal transduction	1 (0.46%)	1	0	0	0	0	0	0	0
17.3.2.99	hormone metabolism.brassinosteroid.signal transduction.other	1 (0.46%)	1	0	0	0	0	0	0	0
20.1	stress.biotic	1 (0.46%)	0	0	1	0	0	0	0	0
20.2.99	stress.abiotic.unspecified	1 (0.46%)	0	0	0	0	0	1	0	0
21	redox	1 (0.46%)	1	0	0	0	0	0	0	0
21.1	redox.thioredoxin	1 (0.46%)	1	0	0	0	0	0	0	0
26.10	misc.cytochrome P450	1 (0.46%)	0	0	0	0	0	0	0	1
26.16	misc.myrosinases-lectin-jacalin	1 (0.46%)	1	0	0	0	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (0.46%)	1	0	0	0	0	0	0	0
26.24	misc.GCN5-related N-acetyltransferase	1 (0.46%)	0	0	0	1	0	0	0	0
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	1 (0.46%)	0	0	0	1	0	0	0	0
27.1	RNA.processing	1 (0.46%)	0	0	0	0	0	0	1	0
27.1.1	RNA.processing.splicing	1 (0.46%)	0	0	0	0	0	0	1	0
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	1 (0.46%)	0	0	0	0	1	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.46%)	0	0	1	0	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.46%)	0	0	0	1	0	0	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.46%)	0	0	0	0	0	0	0	1
27.3.52	RNA.regulation of transcription.Global transcription factor group	1 (0.46%)	1	0	0	0	0	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.46%)	0	0	0	0	1	0	0	0
27.3.80	RNA.regulation of transcription.zf-HD	1 (0.46%)	0	0	0	0	0	1	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (0.46%)	0	0	0	0	0	1	0	0
29.2.1.2.2.34	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34	1 (0.46%)	0	0	0	0	1	0	0	0
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.46%)	0	0	0	0	0	0	0	1
29.2.2.50	protein.synthesis.ribosome biogenesis.BRIX	1 (0.46%)	0	0	0	0	0	0	0	1
29.2.4	protein.synthesis.elongation	1 (0.46%)	0	0	0	0	0	0	0	1
29.5.11.1	protein.degradation.ubiquitin.ubiquitin	1 (0.46%)	0	0	0	1	0	0	0	0
29.5.11.20	protein.degradation.ubiquitin.proteasom	1 (0.46%)	0	0	0	0	1	0	0	0
29.5.11.4.1	protein.degradation.ubiquitin.E3.HECT	1 (0.46%)	0	0	0	0	0	1	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (0.46%)	0	0	0	0	0	0	0	1
29.5.5	protein.degradation.serine protease	1 (0.46%)	0	0	0	0	1	0	0	0
3.5	minor CHO metabolism.others	1 (0.46%)	0	0	1	0	0	0	0	0
30.1	signalling.in sugar and nutrient physiology	1 (0.46%)	0	0	0	0	0	0	1	0
30.1.1	signalling.in sugar and nutrient physiology	1 (0.46%)	0	0	0	0	0	0	1	0
30.4	signalling.phosphinositides	1 (0.46%)	0	0	1	0	0	0	0	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	1 (0.46%)	0	0	1	0	0	0	0	0
30.5	signalling.G-proteins	1 (0.46%)	0	0	0	0	1	0	0	0
30.6	signalling.MAP kinases	1 (0.46%)	0	1	0	0	0	0	0	0
31.1	cell.organisation	1 (0.46%)	0	0	0	0	1	0	0	0
31.2	cell.division	1 (0.46%)	0	0	0	0	0	1	0	0
34.15	transport.potassium	1 (0.46%)	0	0	0	0	1	0	0	0