Gene Ontology terms associated with a binding site

Binding site
Motif_289
Name
LFY
Description
Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins
#Associated genes
213
#Associated GO terms
1043
 
Biological Process
Molecular Function
Cellular Component






Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0008152metabolic process116 (54.46%)759817181691314
GO:0009987cellular process113 (53.05%)8499171515111213
GO:0071704organic substance metabolic process103 (48.36%)648716161591111
GO:0044238primary metabolic process100 (46.95%)548716161491011
GO:0044237cellular metabolic process98 (46.01%)548715141491111
GO:0044260cellular macromolecule metabolic process85 (39.91%)345714131081011
GO:0043170macromolecule metabolic process85 (39.91%)345714131081011
GO:0044699single-organism process70 (32.86%)1045410911476
GO:0010467gene expression63 (29.58%)2455778799
GO:0006807nitrogen compound metabolic process54 (25.35%)3335569857
GO:0006725cellular aromatic compound metabolic process53 (24.88%)2335569857
GO:0034641cellular nitrogen compound metabolic process53 (24.88%)3335568857
GO:0046483heterocycle metabolic process53 (24.88%)2335569857
GO:0006139nucleobase-containing compound metabolic process52 (24.41%)2335568857
GO:1901360organic cyclic compound metabolic process52 (24.41%)2335568857
GO:0009058biosynthetic process51 (23.94%)4363657458
GO:1901576organic substance biosynthetic process51 (23.94%)4363657458
GO:0090304nucleic acid metabolic process49 (23.00%)2335557757
GO:0044249cellular biosynthetic process48 (22.54%)3353557458
GO:0016070RNA metabolic process47 (22.07%)2334557657
GO:0044763single-organism cellular process47 (22.07%)7242837455
GO:0065007biological regulation44 (20.66%)3232876445
GO:0034645cellular macromolecule biosynthetic process43 (20.19%)2343556348
GO:0009059macromolecule biosynthetic process43 (20.19%)2343556348
GO:0050789regulation of biological process43 (20.19%)3232875445
GO:0050794regulation of cellular process40 (18.78%)2232875335
GO:0044267cellular protein metabolic process38 (17.84%)0222984155
GO:0019538protein metabolic process38 (17.84%)0222984155
GO:0050896response to stimulus37 (17.37%)4203944452
GO:0044710single-organism metabolic process36 (16.90%)6241456143
GO:0031323regulation of cellular metabolic process33 (15.49%)1232574225
GO:0019222regulation of metabolic process33 (15.49%)1232574225
GO:0080090regulation of primary metabolic process33 (15.49%)1232574225
GO:0010468regulation of gene expression31 (14.55%)1222564225
GO:0060255regulation of macromolecule metabolic process31 (14.55%)1222564225
GO:0044271cellular nitrogen compound biosynthetic process30 (14.08%)2222445315
GO:0019438aromatic compound biosynthetic process29 (13.62%)1222445315
GO:0018130heterocycle biosynthetic process29 (13.62%)1222445315
GO:0034654nucleobase-containing compound biosynthetic process29 (13.62%)1222445315
GO:1901362organic cyclic compound biosynthetic process29 (13.62%)1222445315
GO:0009889regulation of biosynthetic process29 (13.62%)1232454215
GO:0031326regulation of cellular biosynthetic process29 (13.62%)1232454215
GO:2000112regulation of cellular macromolecule biosynthetic process28 (13.15%)1222454215
GO:0010556regulation of macromolecule biosynthetic process28 (13.15%)1222454215
GO:0051171regulation of nitrogen compound metabolic process28 (13.15%)1222454215
GO:0019219regulation of nucleobase-containing compound metabolic process28 (13.15%)1222454215
GO:0032774RNA biosynthetic process27 (12.68%)1222444215
GO:2001141regulation of RNA biosynthetic process27 (12.68%)1222444215
GO:0051252regulation of RNA metabolic process27 (12.68%)1222444215
GO:0006355regulation of transcription, DNA-dependent27 (12.68%)1222444215
GO:0006351transcription, DNA-templated27 (12.68%)1222444215
GO:0032502developmental process25 (11.74%)2200337134
GO:0032501multicellular organismal process24 (11.27%)2201137134
GO:0044767single-organism developmental process24 (11.27%)2200336134
GO:0044707single-multicellular organism process23 (10.80%)2201136134
GO:0048856anatomical structure development22 (10.33%)2200137133
GO:0007275multicellular organismal development22 (10.33%)2200136134
GO:0006796phosphate-containing compound metabolic process21 (9.86%)0021844101
GO:0006793phosphorus metabolic process21 (9.86%)0021844101
GO:0006464cellular protein modification process20 (9.39%)0101862011
GO:0043412macromolecule modification20 (9.39%)0101862011
GO:0036211protein modification process20 (9.39%)0101862011
GO:0048731system development20 (9.39%)2200135133
GO:0006396RNA processing18 (8.45%)1112112441
GO:0006950response to stress18 (8.45%)2002322340
GO:0016310phosphorylation16 (7.51%)0011832001
GO:0051704multi-organism process15 (7.04%)0001413330
GO:0055114oxidation-reduction process15 (7.04%)2121123021
GO:0006412translation15 (7.04%)0121112133
GO:0007154cell communication14 (6.57%)2100511112
GO:0048513organ development14 (6.57%)2200004123
GO:0009791post-embryonic development14 (6.57%)1100134022
GO:0006468protein phosphorylation14 (6.57%)0001732001
GO:0023052signaling14 (6.57%)2100511112
GO:0044700single organism signaling14 (6.57%)2100511112
GO:0003006developmental process involved in reproduction13 (6.10%)1100133121
GO:0000003reproduction13 (6.10%)1100133121
GO:0022414reproductive process13 (6.10%)1100133121
GO:0051716cellular response to stimulus12 (5.63%)2100311112
GO:0006952defense response12 (5.63%)1002211320
GO:0051234establishment of localization12 (5.63%)3012021111
GO:0051179localization12 (5.63%)3012021111
GO:0016071mRNA metabolic process12 (5.63%)1101111330
GO:0006397mRNA processing12 (5.63%)1101111330
GO:0050793regulation of developmental process12 (5.63%)1000113132
GO:0009607response to biotic stimulus12 (5.63%)0001412220
GO:0042221response to chemical12 (5.63%)3200202012
GO:0051707response to other organism12 (5.63%)0001412220
GO:0007165signal transduction12 (5.63%)2100311112
GO:0044702single organism reproductive process12 (5.63%)1100132121
GO:0006810transport12 (5.63%)3012021111
GO:0016043cellular component organization11 (5.16%)2100111122
GO:0071840cellular component organization or biogenesis11 (5.16%)2100111122
GO:0048367shoot system development11 (5.16%)1200123011
GO:0044281small molecule metabolic process11 (5.16%)2010113111
GO:0030154cell differentiation10 (4.69%)0000213112
GO:0048869cellular developmental process10 (4.69%)0000213112
GO:0051239regulation of multicellular organismal process10 (4.69%)1000112131
GO:0048608reproductive structure development10 (4.69%)1100132011
GO:0061458reproductive system development10 (4.69%)1100132011
GO:0010033response to organic substance10 (4.69%)3200201002
GO:0005975carbohydrate metabolic process9 (4.23%)2021112000
GO:0042742defense response to bacterium9 (4.23%)0001211220
GO:0098542defense response to other organism9 (4.23%)0001211220
GO:0071702organic substance transport9 (4.23%)2002021011
GO:0009628response to abiotic stimulus9 (4.23%)1001121021
GO:0009617response to bacterium9 (4.23%)0001211220
GO:0009719response to endogenous stimulus9 (4.23%)2200201002
GO:0044711single-organism biosynthetic process9 (4.23%)3020101110
GO:0009908flower development8 (3.76%)1100121011
GO:0048519negative regulation of biological process8 (3.76%)1100121011
GO:2000026regulation of multicellular organismal development8 (3.76%)1000112021
GO:0009725response to hormone8 (3.76%)2100201002
GO:0009888tissue development8 (3.76%)1000002122
GO:0009653anatomical structure morphogenesis7 (3.29%)1100001121
GO:0051641cellular localization7 (3.29%)2002001011
GO:0070727cellular macromolecule localization7 (3.29%)2002001011
GO:0034613cellular protein localization7 (3.29%)2002001011
GO:0051649establishment of localization in cell7 (3.29%)2002001011
GO:0045184establishment of protein localization7 (3.29%)2002001011
GO:0006886intracellular protein transport7 (3.29%)2002001011
GO:0046907intracellular transport7 (3.29%)2002001011
GO:0033036macromolecule localization7 (3.29%)2002001011
GO:0006996organelle organization7 (3.29%)2100111010
GO:0019637organophosphate metabolic process7 (3.29%)0020112100
GO:0008104protein localization7 (3.29%)2002001011
GO:0015031protein transport7 (3.29%)2002001011
GO:0044765single-organism transport7 (3.29%)2010020110
GO:0070887cellular response to chemical stimulus6 (2.82%)2100001002
GO:0071495cellular response to endogenous stimulus6 (2.82%)2100001002
GO:0032870cellular response to hormone stimulus6 (2.82%)2100001002
GO:0071310cellular response to organic substance6 (2.82%)2100001002
GO:0008544epidermis development6 (2.82%)0000002112
GO:0009755hormone-mediated signaling pathway6 (2.82%)2100001002
GO:0006629lipid metabolic process6 (2.82%)2010111000
GO:0051128regulation of cellular component organization6 (2.82%)1000110120
GO:1901700response to oxygen-containing compound6 (2.82%)0100101012
GO:0009314response to radiation6 (2.82%)1000110021
GO:0043588skin development6 (2.82%)0000002112
GO:0016192vesicle-mediated transport6 (2.82%)2002001001
GO:0009056catabolic process5 (2.35%)2000030000
GO:0044262cellular carbohydrate metabolic process5 (2.35%)1021100000
GO:0071368cellular response to cytokinin stimulus5 (2.35%)2100001001
GO:0051276chromosome organization5 (2.35%)1100110010
GO:0009736cytokinin-activated signaling pathway5 (2.35%)2100001001
GO:0048589developmental growth5 (2.35%)1000000121
GO:0009913epidermal cell differentiation5 (2.35%)0000001112
GO:0030855epithelial cell differentiation5 (2.35%)0000001112
GO:0060429epithelium development5 (2.35%)0000001112
GO:0040007growth5 (2.35%)1000000121
GO:0048507meristem development5 (2.35%)1000001012
GO:0010605negative regulation of macromolecule metabolic process5 (2.35%)0100120010
GO:0009892negative regulation of metabolic process5 (2.35%)0100120010
GO:1901564organonitrogen compound metabolic process5 (2.35%)0000012101
GO:0048827phyllome development5 (2.35%)1100002001
GO:2000241regulation of reproductive process5 (2.35%)0000110120
GO:0009735response to cytokinin5 (2.35%)2100001001
GO:0009416response to light stimulus5 (2.35%)0000110021
GO:0048364root development5 (2.35%)0100001111
GO:0022622root system development5 (2.35%)0100001111
GO:0044723single-organism carbohydrate metabolic process5 (2.35%)2020100000
GO:0006259DNA metabolic process4 (1.88%)1101000100
GO:1901135carbohydrate derivative metabolic process4 (1.88%)0010011100
GO:0019752carboxylic acid metabolic process4 (1.88%)1000002001
GO:0048440carpel development4 (1.88%)1100001001
GO:0044248cellular catabolic process4 (1.88%)2000020000
GO:0016568chromatin modification4 (1.88%)0100110010
GO:0006325chromatin organization4 (1.88%)0100110010
GO:0016569covalent chromatin modification4 (1.88%)0100110010
GO:0048437floral organ development4 (1.88%)1100001001
GO:0048438floral whorl development4 (1.88%)1100001001
GO:0048467gynoecium development4 (1.88%)1100001001
GO:0034968histone lysine methylation4 (1.88%)0100110010
GO:0016571histone methylation4 (1.88%)0100110010
GO:0016570histone modification4 (1.88%)0100110010
GO:0043414macromolecule methylation4 (1.88%)0100110010
GO:0032259methylation4 (1.88%)0100110010
GO:0048523negative regulation of cellular process4 (1.88%)0100011001
GO:0010629negative regulation of gene expression4 (1.88%)0100110010
GO:0045814negative regulation of gene expression, epigenetic4 (1.88%)0100110010
GO:0006082organic acid metabolic process4 (1.88%)1000002001
GO:1901575organic substance catabolic process4 (1.88%)1000030000
GO:0090407organophosphate biosynthetic process4 (1.88%)0010101100
GO:0043436oxoacid metabolic process4 (1.88%)1000002001
GO:0048518positive regulation of biological process4 (1.88%)0000110011
GO:0009893positive regulation of metabolic process4 (1.88%)0000110011
GO:0048569post-embryonic organ development4 (1.88%)1100001001
GO:0008213protein alkylation4 (1.88%)0100110010
GO:0006479protein methylation4 (1.88%)0100110010
GO:0045595regulation of cell differentiation4 (1.88%)0000001111
GO:0032268regulation of cellular protein metabolic process4 (1.88%)0000120010
GO:0033044regulation of chromosome organization4 (1.88%)1000110010
GO:0048638regulation of developmental growth4 (1.88%)1000000120
GO:0040029regulation of gene expression, epigenetic4 (1.88%)0100110010
GO:0040008regulation of growth4 (1.88%)1000000120
GO:0048509regulation of meristem development4 (1.88%)1000001011
GO:0033043regulation of organelle organization4 (1.88%)1000110010
GO:0048580regulation of post-embryonic development4 (1.88%)0000111010
GO:0051246regulation of protein metabolic process4 (1.88%)0000120010
GO:0009409response to cold4 (1.88%)0000110020
GO:0033993response to lipid4 (1.88%)0000101002
GO:0009266response to temperature stimulus4 (1.88%)0000110020
GO:0044712single-organism catabolic process4 (1.88%)2000020000
GO:0006066alcohol metabolic process3 (1.41%)1010100000
GO:0016051carbohydrate biosynthetic process3 (1.41%)2010000000
GO:1901137carbohydrate derivative biosynthetic process3 (1.41%)0010001100
GO:0048468cell development3 (1.41%)0000000111
GO:0016049cell growth3 (1.41%)0000000111
GO:0048469cell maturation3 (1.41%)0000000111
GO:0000902cell morphogenesis3 (1.41%)0000000111
GO:0000904cell morphogenesis involved in differentiation3 (1.41%)0000000111
GO:0009932cell tip growth3 (1.41%)0000000111
GO:0032989cellular component morphogenesis3 (1.41%)0000000111
GO:0044255cellular lipid metabolic process3 (1.41%)1010001000
GO:0048610cellular process involved in reproduction3 (1.41%)1000000110
GO:0071370cellular response to gibberellin stimulus3 (1.41%)0000001002
GO:0071396cellular response to lipid3 (1.41%)0000001002
GO:1901701cellular response to oxygen-containing compound3 (1.41%)0000001002
GO:0048588developmental cell growth3 (1.41%)0000000111
GO:0060560developmental growth involved in morphogenesis3 (1.41%)0000000111
GO:0021700developmental maturation3 (1.41%)0000000111
GO:0009740gibberellic acid mediated signaling pathway3 (1.41%)0000001002
GO:0010476gibberellin mediated signaling pathway3 (1.41%)0000001002
GO:1901657glycosyl compound metabolic process3 (1.41%)0010010100
GO:0070734histone H3-K27 methylation3 (1.41%)0000110010
GO:0051568histone H3-K4 methylation3 (1.41%)0000110010
GO:0010073meristem maintenance3 (1.41%)1000000011
GO:0044706multi-multicellular organism process3 (1.41%)0000001110
GO:0044703multi-organism reproductive process3 (1.41%)0000001110
GO:0055086nucleobase-containing small molecule metabolic process3 (1.41%)0000011100
GO:0006753nucleoside phosphate metabolic process3 (1.41%)0000011100
GO:0009117nucleotide metabolic process3 (1.41%)0000011100
GO:1901615organic hydroxy compound metabolic process3 (1.41%)1010100000
GO:0009648photoperiodism3 (1.41%)0000110010
GO:0048573photoperiodism, flowering3 (1.41%)0000110010
GO:0048868pollen tube development3 (1.41%)0000001110
GO:0009856pollination3 (1.41%)0000001110
GO:0051130positive regulation of cellular component organization3 (1.41%)0000110010
GO:0031325positive regulation of cellular metabolic process3 (1.41%)0000110010
GO:0048522positive regulation of cellular process3 (1.41%)0000110010
GO:0032270positive regulation of cellular protein metabolic process3 (1.41%)0000110010
GO:2001252positive regulation of chromosome organization3 (1.41%)0000110010
GO:0061087positive regulation of histone H3-K27 methylation3 (1.41%)0000110010
GO:0051571positive regulation of histone H3-K4 methylation3 (1.41%)0000110010
GO:0031062positive regulation of histone methylation3 (1.41%)0000110010
GO:0031058positive regulation of histone modification3 (1.41%)0000110010
GO:0010604positive regulation of macromolecule metabolic process3 (1.41%)0000110010
GO:0010638positive regulation of organelle organization3 (1.41%)0000110010
GO:0051247positive regulation of protein metabolic process3 (1.41%)0000110010
GO:0031401positive regulation of protein modification process3 (1.41%)0000110010
GO:0009886post-embryonic morphogenesis3 (1.41%)1100001000
GO:0022603regulation of anatomical structure morphogenesis3 (1.41%)0000000120
GO:1902275regulation of chromatin organization3 (1.41%)0000110010
GO:0009909regulation of flower development3 (1.41%)0000110010
GO:0061085regulation of histone H3-K27 methylation3 (1.41%)0000110010
GO:0051569regulation of histone H3-K4 methylation3 (1.41%)0000110010
GO:0031060regulation of histone methylation3 (1.41%)0000110010
GO:0031056regulation of histone modification3 (1.41%)0000110010
GO:0031399regulation of protein modification process3 (1.41%)0000110010
GO:0048831regulation of shoot system development3 (1.41%)0000110010
GO:0009739response to gibberellin stimulus3 (1.41%)0000001002
GO:0010035response to inorganic substance3 (1.41%)1000001010
GO:0010038response to metal ion3 (1.41%)1000001010
GO:0010053root epidermal cell differentiation3 (1.41%)0000000111
GO:0080147root hair cell development3 (1.41%)0000000111
GO:0048765root hair cell differentiation3 (1.41%)0000000111
GO:0010015root morphogenesis3 (1.41%)0000000111
GO:0048572short-day photoperiodism3 (1.41%)0000110010
GO:0048575short-day photoperiodism, flowering3 (1.41%)0000110010
GO:0044283small molecule biosynthetic process3 (1.41%)0010100010
GO:0055085transmembrane transport3 (1.41%)0010000110
GO:0010054trichoblast differentiation3 (1.41%)0000000111
GO:0048764trichoblast maturation3 (1.41%)0000000111
GO:0009826unidimensional cell growth3 (1.41%)0000000111
GO:0010228vegetative to reproductive phase transition of meristem3 (1.41%)0000110010
GO:0010048vernalization response3 (1.41%)0000110010
GO:0046165alcohol biosynthetic process2 (0.94%)0010100000
GO:0043038amino acid activation2 (0.94%)0000001001
GO:0048646anatomical structure formation involved in morphogenesis2 (0.94%)1100000000
GO:0046835carbohydrate phosphorylation2 (0.94%)0010100000
GO:0048462carpel formation2 (0.94%)1100000000
GO:0048445carpel morphogenesis2 (0.94%)1100000000
GO:0006812cation transport2 (0.94%)1000000100
GO:0008219cell death2 (0.94%)0000101000
GO:0045165cell fate commitment2 (0.94%)0000200000
GO:0007267cell-cell signaling2 (0.94%)0000200000
GO:0045168cell-cell signaling involved in cell fate commitment2 (0.94%)0000200000
GO:0006520cellular amino acid metabolic process2 (0.94%)0000001001
GO:0006073cellular glucan metabolic process2 (0.94%)1001000000
GO:0044264cellular polysaccharide metabolic process2 (0.94%)1001000000
GO:0009704de-etiolation2 (0.94%)0000000011
GO:0016265death2 (0.94%)0000101000
GO:0016311dephosphorylation2 (0.94%)0010001000
GO:0009790embryo development2 (0.94%)0000011000
GO:0009793embryo development ending in seed dormancy2 (0.94%)0000011000
GO:0048449floral organ formation2 (0.94%)1100000000
GO:0048444floral organ morphogenesis2 (0.94%)1100000000
GO:0010154fruit development2 (0.94%)0000011000
GO:0044042glucan metabolic process2 (0.94%)1001000000
GO:0046486glycerolipid metabolic process2 (0.94%)0010001000
GO:0006650glycerophospholipid metabolic process2 (0.94%)0010001000
GO:1901659glycosyl compound biosynthetic process2 (0.94%)0010000100
GO:0006020inositol metabolic process2 (0.94%)0010100000
GO:0032958inositol phosphate biosynthetic process2 (0.94%)0010100000
GO:0043647inositol phosphate metabolic process2 (0.94%)0010100000
GO:0052746inositol phosphorylation2 (0.94%)0010100000
GO:0032957inositol trisphosphate metabolic process2 (0.94%)0010100000
GO:0044419interspecies interaction between organisms2 (0.94%)0000200000
GO:0006811ion transport2 (0.94%)1000000100
GO:0048366leaf development2 (0.94%)0000002000
GO:0016042lipid catabolic process2 (0.94%)1000010000
GO:0030258lipid modification2 (0.94%)0010001000
GO:0035266meristem growth2 (0.94%)1000000010
GO:0007017microtubule-based process2 (0.94%)1000000100
GO:0010264myo-inositol hexakisphosphate biosynthetic process2 (0.94%)0010100000
GO:0033517myo-inositol hexakisphosphate metabolic process2 (0.94%)0010100000
GO:0034660ncRNA metabolic process2 (0.94%)0000001001
GO:0009890negative regulation of biosynthetic process2 (0.94%)0100010000
GO:0045596negative regulation of cell differentiation2 (0.94%)0000001001
GO:0031327negative regulation of cellular biosynthetic process2 (0.94%)0100010000
GO:2000113negative regulation of cellular macromolecule biosynthetic process2 (0.94%)0100010000
GO:0031324negative regulation of cellular metabolic process2 (0.94%)0100010000
GO:0051093negative regulation of developmental process2 (0.94%)0000001001
GO:0010558negative regulation of macromolecule biosynthetic process2 (0.94%)0100010000
GO:0009116nucleoside metabolic process2 (0.94%)0000010100
GO:1901293nucleoside phosphate biosynthetic process2 (0.94%)0000001100
GO:0009141nucleoside triphosphate metabolic process2 (0.94%)0000010100
GO:0009165nucleotide biosynthetic process2 (0.94%)0000001100
GO:0048645organ formation2 (0.94%)1100000000
GO:0009887organ morphogenesis2 (0.94%)1100000000
GO:1901617organic hydroxy compound biosynthetic process2 (0.94%)0010100000
GO:0007389pattern specification process2 (0.94%)1100000000
GO:0046856phosphatidylinositol dephosphorylation2 (0.94%)0010001000
GO:0046488phosphatidylinositol metabolic process2 (0.94%)0010001000
GO:0046839phospholipid dephosphorylation2 (0.94%)0010001000
GO:0006644phospholipid metabolic process2 (0.94%)0010001000
GO:0000160phosphorelay signal transduction system2 (0.94%)0000000110
GO:0009640photomorphogenesis2 (0.94%)0000000011
GO:0009860pollen tube growth2 (0.94%)0000000110
GO:0046173polyol biosynthetic process2 (0.94%)0010100000
GO:0019751polyol metabolic process2 (0.94%)0010100000
GO:0005976polysaccharide metabolic process2 (0.94%)1001000000
GO:0048563post-embryonic organ morphogenesis2 (0.94%)1100000000
GO:0012501programmed cell death2 (0.94%)0000101000
GO:0006457protein folding2 (0.94%)0000000011
GO:0032446protein modification by small protein conjugation2 (0.94%)0000020000
GO:0070647protein modification by small protein conjugation or removal2 (0.94%)0000020000
GO:0016567protein ubiquitination2 (0.94%)0000020000
GO:0042278purine nucleoside metabolic process2 (0.94%)0000010100
GO:0009144purine nucleoside triphosphate metabolic process2 (0.94%)0000010100
GO:0006163purine nucleotide metabolic process2 (0.94%)0000010100
GO:0046128purine ribonucleoside metabolic process2 (0.94%)0000010100
GO:0009205purine ribonucleoside triphosphate metabolic process2 (0.94%)0000010100
GO:0009150purine ribonucleotide metabolic process2 (0.94%)0000010100
GO:0072521purine-containing compound metabolic process2 (0.94%)0000010100
GO:0003002regionalization2 (0.94%)1100000000
GO:0065008regulation of biological quality2 (0.94%)1000001000
GO:0006109regulation of carbohydrate metabolic process2 (0.94%)0011000000
GO:0060284regulation of cell development2 (0.94%)0000000110
GO:0001558regulation of cell growth2 (0.94%)0000000110
GO:0022604regulation of cell morphogenesis2 (0.94%)0000000110
GO:0010769regulation of cell morphogenesis involved in differentiation2 (0.94%)0000000110
GO:0010675regulation of cellular carbohydrate metabolic process2 (0.94%)0011000000
GO:0040034regulation of development, heterochronic2 (0.94%)0000001001
GO:0010075regulation of meristem growth2 (0.94%)1000000010
GO:0043900regulation of multi-organism process2 (0.94%)0000000110
GO:0080092regulation of pollen tube growth2 (0.94%)0000000110
GO:0048583regulation of response to stimulus2 (0.94%)0000010100
GO:0048506regulation of timing of meristematic phase transition2 (0.94%)0000001001
GO:0048510regulation of timing of transition from vegetative to reproductive phase2 (0.94%)0000001001
GO:0051510regulation of unidimensional cell growth2 (0.94%)0000000110
GO:0046686response to cadmium ion2 (0.94%)0000001010
GO:0009723response to ethylene2 (0.94%)1100000000
GO:0009620response to fungus2 (0.94%)0000200000
GO:0014070response to organic cyclic compound2 (0.94%)1000100000
GO:0006970response to osmotic stress2 (0.94%)0000001010
GO:0009639response to red or far red light2 (0.94%)0000000011
GO:0009651response to salt stress2 (0.94%)0000001010
GO:0009608response to symbiont2 (0.94%)0000200000
GO:0009610response to symbiotic fungus2 (0.94%)0000200000
GO:0010043response to zinc ion2 (0.94%)1000001000
GO:0009119ribonucleoside metabolic process2 (0.94%)0000010100
GO:0009199ribonucleoside triphosphate metabolic process2 (0.94%)0000010100
GO:0009259ribonucleotide metabolic process2 (0.94%)0000010100
GO:0019693ribose phosphate metabolic process2 (0.94%)0000010100
GO:0019748secondary metabolic process2 (0.94%)1010000000
GO:0048316seed development2 (0.94%)0000011000
GO:0010016shoot system morphogenesis2 (0.94%)1000001000
GO:0010094specification of carpel identity2 (0.94%)1100000000
GO:0010093specification of floral organ identity2 (0.94%)1100000000
GO:0010092specification of organ identity2 (0.94%)1100000000
GO:0044403symbiosis, encompassing mutualism through parasitism2 (0.94%)0000200000
GO:0043039tRNA aminoacylation2 (0.94%)0000001001
GO:0006418tRNA aminoacylation for protein translation2 (0.94%)0000001001
GO:0006399tRNA metabolic process2 (0.94%)0000001001
GO:0010026trichome differentiation2 (0.94%)0000001001
GO:0006754ATP biosynthetic process1 (0.47%)0000000100
GO:0015991ATP hydrolysis coupled proton transport1 (0.47%)0000000100
GO:0046034ATP metabolic process1 (0.47%)0000000100
GO:0015986ATP synthesis coupled proton transport1 (0.47%)0000000100
GO:0006305DNA alkylation1 (0.47%)0100000000
GO:0015074DNA integration1 (0.47%)0001000000
GO:0006306DNA methylation1 (0.47%)0100000000
GO:0044728DNA methylation or demethylation1 (0.47%)0100000000
GO:0006304DNA modification1 (0.47%)0100000000
GO:0006310DNA recombination1 (0.47%)1000000000
GO:0006184GTP catabolic process1 (0.47%)0000010000
GO:0046039GTP metabolic process1 (0.47%)0000010000
GO:0048193Golgi vesicle transport1 (0.47%)1000000000
GO:0008380RNA splicing1 (0.47%)1000000000
GO:0032482Rab protein signal transduction1 (0.47%)0000010000
GO:0007265Ras protein signal transduction1 (0.47%)0000010000
GO:0016144S-glycoside biosynthetic process1 (0.47%)0010000000
GO:0016143S-glycoside metabolic process1 (0.47%)0010000000
GO:0042886amide transport1 (0.47%)0000010000
GO:0009308amine metabolic process1 (0.47%)0000001000
GO:0048532anatomical structure arrangement1 (0.47%)0000000010
GO:0060249anatomical structure homeostasis1 (0.47%)1000000000
GO:0048466androecium development1 (0.47%)0000001000
GO:0046283anthocyanin-containing compound metabolic process1 (0.47%)0000000001
GO:0019439aromatic compound catabolic process1 (0.47%)0000010000
GO:0051274beta-glucan biosynthetic process1 (0.47%)1000000000
GO:0051273beta-glucan metabolic process1 (0.47%)1000000000
GO:1901136carbohydrate derivative catabolic process1 (0.47%)0000010000
GO:0008643carbohydrate transport1 (0.47%)0000010000
GO:0046395carboxylic acid catabolic process1 (0.47%)1000000000
GO:0007049cell cycle1 (0.47%)1000000000
GO:0022402cell cycle process1 (0.47%)1000000000
GO:0051301cell division1 (0.47%)0000000001
GO:0042545cell wall modification1 (0.47%)0000000001
GO:0071555cell wall organization1 (0.47%)0000000001
GO:0071554cell wall organization or biogenesis1 (0.47%)0000000001
GO:0034637cellular carbohydrate biosynthetic process1 (0.47%)1000000000
GO:0006928cellular component movement1 (0.47%)0000000100
GO:0034754cellular hormone metabolic process1 (0.47%)0000001000
GO:0042180cellular ketone metabolic process1 (0.47%)0000000010
GO:0044242cellular lipid catabolic process1 (0.47%)1000000000
GO:0044265cellular macromolecule catabolic process1 (0.47%)0000010000
GO:0044270cellular nitrogen compound catabolic process1 (0.47%)0000010000
GO:0033692cellular polysaccharide biosynthetic process1 (0.47%)1000000000
GO:0044257cellular protein catabolic process1 (0.47%)0000010000
GO:0006974cellular response to DNA damage stimulus1 (0.47%)1000000000
GO:0071214cellular response to abiotic stimulus1 (0.47%)0000000001
GO:0071482cellular response to light stimulus1 (0.47%)0000000001
GO:0071478cellular response to radiation1 (0.47%)0000000001
GO:0071489cellular response to red or far red light1 (0.47%)0000000001
GO:0033554cellular response to stress1 (0.47%)1000000000
GO:0030244cellulose biosynthetic process1 (0.47%)1000000000
GO:0030243cellulose metabolic process1 (0.47%)1000000000
GO:0006342chromatin silencing1 (0.47%)0100000000
GO:0031048chromatin silencing by small RNA1 (0.47%)0100000000
GO:0070192chromosome organization involved in meiosis1 (0.47%)1000000000
GO:0007059chromosome segregation1 (0.47%)1000000000
GO:0007623circadian rhythm1 (0.47%)0000000001
GO:0010031circumnutation1 (0.47%)0001000000
GO:0009108coenzyme biosynthetic process1 (0.47%)0000000010
GO:0006732coenzyme metabolic process1 (0.47%)0000000010
GO:0051188cofactor biosynthetic process1 (0.47%)0000000010
GO:0051186cofactor metabolic process1 (0.47%)0000000010
GO:0042407cristae formation1 (0.47%)0000001000
GO:0046202cyanide biosynthetic process1 (0.47%)1000000000
GO:0019499cyanide metabolic process1 (0.47%)1000000000
GO:0006423cysteinyl-tRNA aminoacylation1 (0.47%)0000001000
GO:0009690cytokinin metabolic process1 (0.47%)0000001000
GO:0016482cytoplasmic transport1 (0.47%)0000000010
GO:0007010cytoskeleton organization1 (0.47%)1000000000
GO:0009816defense response to bacterium, incompatible interaction1 (0.47%)0000100000
GO:0009814defense response, incompatible interaction1 (0.47%)0000100000
GO:0009582detection of abiotic stimulus1 (0.47%)0001000000
GO:0009581detection of external stimulus1 (0.47%)0001000000
GO:0009590detection of gravity1 (0.47%)0001000000
GO:0051606detection of stimulus1 (0.47%)0001000000
GO:0009855determination of bilateral symmetry1 (0.47%)1000000000
GO:0043648dicarboxylic acid metabolic process1 (0.47%)0000001000
GO:0009559embryo sac central cell differentiation1 (0.47%)0000001000
GO:0009553embryo sac development1 (0.47%)0000001000
GO:0016197endosomal transport1 (0.47%)1000000000
GO:0015988energy coupled proton transmembrane transport, against electrochemical gradient1 (0.47%)0000000100
GO:0015985energy coupled proton transport, down electrochemical gradient1 (0.47%)0000000100
GO:0072596establishment of protein localization to chloroplast1 (0.47%)0000000010
GO:0072594establishment of protein localization to organelle1 (0.47%)0000000010
GO:0045229external encapsulating structure organization1 (0.47%)0000000001
GO:0009062fatty acid catabolic process1 (0.47%)1000000000
GO:0006631fatty acid metabolic process1 (0.47%)1000000000
GO:0009812flavonoid metabolic process1 (0.47%)0000000001
GO:0048439flower morphogenesis1 (0.47%)1000000000
GO:0042044fluid transport1 (0.47%)0000010000
GO:0048229gametophyte development1 (0.47%)0000001000
GO:0016458gene silencing1 (0.47%)0100000000
GO:0031047gene silencing by RNA1 (0.47%)0100000000
GO:0009250glucan biosynthetic process1 (0.47%)1000000000
GO:0019761glucosinolate biosynthetic process1 (0.47%)0010000000
GO:0019760glucosinolate metabolic process1 (0.47%)0010000000
GO:0019758glycosinolate biosynthetic process1 (0.47%)0010000000
GO:0019757glycosinolate metabolic process1 (0.47%)0010000000
GO:1901658glycosyl compound catabolic process1 (0.47%)0000010000
GO:0009630gravitropism1 (0.47%)0001000000
GO:1901069guanosine-containing compound catabolic process1 (0.47%)0000010000
GO:1901068guanosine-containing compound metabolic process1 (0.47%)0000010000
GO:0046700heterocycle catabolic process1 (0.47%)0000010000
GO:0042592homeostatic process1 (0.47%)1000000000
GO:0042445hormone metabolic process1 (0.47%)0000001000
GO:0006818hydrogen transport1 (0.47%)0000000100
GO:0006955immune response1 (0.47%)0000100000
GO:0002376immune system process1 (0.47%)0000100000
GO:0045087innate immune response1 (0.47%)0000100000
GO:0007007inner mitochondrial membrane organization1 (0.47%)0000001000
GO:0044743intracellular protein transmembrane import1 (0.47%)0000000010
GO:0065002intracellular protein transmembrane transport1 (0.47%)0000000010
GO:0035556intracellular signal transduction1 (0.47%)0000010000
GO:0034220ion transmembrane transport1 (0.47%)0000000100
GO:0000741karyogamy1 (0.47%)0000001000
GO:0042181ketone biosynthetic process1 (0.47%)0000000010
GO:0002164larval development1 (0.47%)0000001000
GO:0006430lysyl-tRNA aminoacylation1 (0.47%)0000000001
GO:0009057macromolecule catabolic process1 (0.47%)0000010000
GO:0010216maintenance of DNA methylation1 (0.47%)0100000000
GO:0048497maintenance of floral organ identity1 (0.47%)0000001000
GO:0010074maintenance of meristem identity1 (0.47%)0000000001
GO:0048496maintenance of organ identity1 (0.47%)0000001000
GO:0010492maintenance of shoot apical meristem identity1 (0.47%)0000000001
GO:0006108malate metabolic process1 (0.47%)0000001000
GO:0009561megagametogenesis1 (0.47%)0000001000
GO:0007126meiosis1 (0.47%)1000000000
GO:0007127meiosis I1 (0.47%)1000000000
GO:0042138meiotic DNA double-strand break formation1 (0.47%)1000000000
GO:0051321meiotic cell cycle1 (0.47%)1000000000
GO:0045132meiotic chromosome segregation1 (0.47%)1000000000
GO:0061024membrane organization1 (0.47%)0000001000
GO:0009933meristem structural organization1 (0.47%)0000000010
GO:0030001metal ion transport1 (0.47%)1000000000
GO:0000226microtubule cytoskeleton organization1 (0.47%)1000000000
GO:0007020microtubule nucleation1 (0.47%)1000000000
GO:0007018microtubule-based movement1 (0.47%)0000000100
GO:0007006mitochondrial membrane organization1 (0.47%)0000001000
GO:0007005mitochondrion organization1 (0.47%)0000001000
GO:0043632modification-dependent macromolecule catabolic process1 (0.47%)0000010000
GO:0019941modification-dependent protein catabolic process1 (0.47%)0000010000
GO:0072329monocarboxylic acid catabolic process1 (0.47%)1000000000
GO:0032787monocarboxylic acid metabolic process1 (0.47%)1000000000
GO:0015672monovalent inorganic cation transport1 (0.47%)0000000100
GO:0032504multicellular organism reproduction1 (0.47%)1000000000
GO:0050879multicellular organismal movement1 (0.47%)0001000000
GO:0009959negative gravitropism1 (0.47%)0001000000
GO:0051253negative regulation of RNA metabolic process1 (0.47%)0100000000
GO:0032269negative regulation of cellular protein metabolic process1 (0.47%)0000010000
GO:0051172negative regulation of nitrogen compound metabolic process1 (0.47%)0100000000
GO:0045934negative regulation of nucleobase-containing compound metabolic process1 (0.47%)0100000000
GO:0051248negative regulation of protein metabolic process1 (0.47%)0000010000
GO:0045892negative regulation of transcription, DNA-dependent1 (0.47%)0100000000
GO:0017148negative regulation of translation1 (0.47%)0000010000
GO:0002119nematode larval development1 (0.47%)0000001000
GO:0071705nitrogen compound transport1 (0.47%)0000010000
GO:0090305nucleic acid phosphodiester bond hydrolysis1 (0.47%)1000000000
GO:0034655nucleobase-containing compound catabolic process1 (0.47%)0000010000
GO:0009163nucleoside biosynthetic process1 (0.47%)0000000100
GO:0009164nucleoside catabolic process1 (0.47%)0000010000
GO:0009124nucleoside monophosphate biosynthetic process1 (0.47%)0000000100
GO:0009123nucleoside monophosphate metabolic process1 (0.47%)0000000100
GO:1901292nucleoside phosphate catabolic process1 (0.47%)0000010000
GO:0009142nucleoside triphosphate biosynthetic process1 (0.47%)0000000100
GO:0009143nucleoside triphosphate catabolic process1 (0.47%)0000010000
GO:0009166nucleotide catabolic process1 (0.47%)0000010000
GO:0009226nucleotide-sugar biosynthetic process1 (0.47%)0000001000
GO:0009225nucleotide-sugar metabolic process1 (0.47%)0000001000
GO:0006997nucleus organization1 (0.47%)0000001000
GO:0019755one-carbon compound transport1 (0.47%)0000010000
GO:0048284organelle fusion1 (0.47%)0000001000
GO:0016054organic acid catabolic process1 (0.47%)1000000000
GO:1901361organic cyclic compound catabolic process1 (0.47%)0000010000
GO:1901566organonitrogen compound biosynthetic process1 (0.47%)0000000100
GO:1901565organonitrogen compound catabolic process1 (0.47%)0000010000
GO:0046434organophosphate catabolic process1 (0.47%)0000010000
GO:0048481ovule development1 (0.47%)0000000001
GO:0009401phosphoenolpyruvate-dependent sugar phosphotransferase system1 (0.47%)0000010000
GO:0042372phylloquinone biosynthetic process1 (0.47%)0000000010
GO:0042374phylloquinone metabolic process1 (0.47%)0000000010
GO:0042440pigment metabolic process1 (0.47%)0000000001
GO:0035670plant-type ovary development1 (0.47%)0000000001
GO:0010197polar nucleus fusion1 (0.47%)0000001000
GO:0000271polysaccharide biosynthetic process1 (0.47%)1000000000
GO:0009958positive gravitropism1 (0.47%)0001000000
GO:0031539positive regulation of anthocyanin metabolic process1 (0.47%)0000000001
GO:0010608posttranscriptional regulation of gene expression1 (0.47%)0000010000
GO:0046777protein autophosphorylation1 (0.47%)0000100000
GO:0030163protein catabolic process1 (0.47%)0000010000
GO:0017038protein import1 (0.47%)0000000010
GO:0045037protein import into chloroplast stroma1 (0.47%)0000000010
GO:0072598protein localization to chloroplast1 (0.47%)0000000010
GO:0033365protein localization to organelle1 (0.47%)0000000010
GO:0009306protein secretion1 (0.47%)0000000010
GO:0006605protein targeting1 (0.47%)0000000010
GO:0045036protein targeting to chloroplast1 (0.47%)0000000010
GO:0071806protein transmembrane transport1 (0.47%)0000000010
GO:0006508proteolysis1 (0.47%)0000010000
GO:0051603proteolysis involved in cellular protein catabolic process1 (0.47%)0000010000
GO:0015992proton transport1 (0.47%)0000000100
GO:0042451purine nucleoside biosynthetic process1 (0.47%)0000000100
GO:0006152purine nucleoside catabolic process1 (0.47%)0000010000
GO:0009127purine nucleoside monophosphate biosynthetic process1 (0.47%)0000000100
GO:0009126purine nucleoside monophosphate metabolic process1 (0.47%)0000000100
GO:0009145purine nucleoside triphosphate biosynthetic process1 (0.47%)0000000100
GO:0009146purine nucleoside triphosphate catabolic process1 (0.47%)0000010000
GO:0006164purine nucleotide biosynthetic process1 (0.47%)0000000100
GO:0006195purine nucleotide catabolic process1 (0.47%)0000010000
GO:0046129purine ribonucleoside biosynthetic process1 (0.47%)0000000100
GO:0046130purine ribonucleoside catabolic process1 (0.47%)0000010000
GO:0009168purine ribonucleoside monophosphate biosynthetic process1 (0.47%)0000000100
GO:0009167purine ribonucleoside monophosphate metabolic process1 (0.47%)0000000100
GO:0009206purine ribonucleoside triphosphate biosynthetic process1 (0.47%)0000000100
GO:0009207purine ribonucleoside triphosphate catabolic process1 (0.47%)0000010000
GO:0009152purine ribonucleotide biosynthetic process1 (0.47%)0000000100
GO:0009154purine ribonucleotide catabolic process1 (0.47%)0000010000
GO:0072522purine-containing compound biosynthetic process1 (0.47%)0000000100
GO:0072523purine-containing compound catabolic process1 (0.47%)0000010000
GO:1901663quinone biosynthetic process1 (0.47%)0000000010
GO:1901661quinone metabolic process1 (0.47%)0000000010
GO:0035825reciprocal DNA recombination1 (0.47%)1000000000
GO:0007131reciprocal meiotic recombination1 (0.47%)1000000000
GO:0010017red or far-red light signaling pathway1 (0.47%)0000000001
GO:0051052regulation of DNA metabolic process1 (0.47%)1000000000
GO:0033124regulation of GTP catabolic process1 (0.47%)0000010000
GO:0043087regulation of GTPase activity1 (0.47%)0000010000
GO:0032313regulation of Rab GTPase activity1 (0.47%)0000010000
GO:0032483regulation of Rab protein signal transduction1 (0.47%)0000010000
GO:0032318regulation of Ras GTPase activity1 (0.47%)0000010000
GO:0046578regulation of Ras protein signal transduction1 (0.47%)0000010000
GO:0031537regulation of anthocyanin metabolic process1 (0.47%)0000000001
GO:0043255regulation of carbohydrate biosynthetic process1 (0.47%)0010000000
GO:0009894regulation of catabolic process1 (0.47%)0000010000
GO:0050790regulation of catalytic activity1 (0.47%)0000010000
GO:0010646regulation of cell communication1 (0.47%)0000010000
GO:0010941regulation of cell death1 (0.47%)0000001000
GO:0031329regulation of cellular catabolic process1 (0.47%)0000010000
GO:0031347regulation of defense response1 (0.47%)0000000100
GO:0010439regulation of glucosinolate biosynthetic process1 (0.47%)0010000000
GO:0032844regulation of homeostatic process1 (0.47%)1000000000
GO:0010817regulation of hormone levels1 (0.47%)0000001000
GO:0051336regulation of hydrolase activity1 (0.47%)0000010000
GO:1902531regulation of intracellular signal transduction1 (0.47%)0000010000
GO:0009934regulation of meristem structural organization1 (0.47%)0000000010
GO:0065009regulation of molecular function1 (0.47%)0000010000
GO:0061062regulation of nematode larval development1 (0.47%)0000001000
GO:0009118regulation of nucleoside metabolic process1 (0.47%)0000010000
GO:0030811regulation of nucleotide catabolic process1 (0.47%)0000010000
GO:0006140regulation of nucleotide metabolic process1 (0.47%)0000010000
GO:0019220regulation of phosphate metabolic process1 (0.47%)0000010000
GO:0051174regulation of phosphorus metabolic process1 (0.47%)0000010000
GO:0032881regulation of polysaccharide metabolic process1 (0.47%)0001000000
GO:0043067regulation of programmed cell death1 (0.47%)0000001000
GO:0033121regulation of purine nucleotide catabolic process1 (0.47%)0000010000
GO:1900542regulation of purine nucleotide metabolic process1 (0.47%)0000010000
GO:0080134regulation of response to stress1 (0.47%)0000000100
GO:0043455regulation of secondary metabolic process1 (0.47%)0010000000
GO:1900376regulation of secondary metabolite biosynthetic process1 (0.47%)0010000000
GO:0009966regulation of signal transduction1 (0.47%)0000010000
GO:0023051regulation of signaling1 (0.47%)0000010000
GO:0051056regulation of small GTPase mediated signal transduction1 (0.47%)0000010000
GO:2000904regulation of starch metabolic process1 (0.47%)0001000000
GO:0042762regulation of sulfur metabolic process1 (0.47%)0010000000
GO:0032204regulation of telomere maintenance1 (0.47%)1000000000
GO:0006417regulation of translation1 (0.47%)0000010000
GO:0009737response to abscisic acid1 (0.47%)0000100000
GO:0097305response to alcohol1 (0.47%)0000100000
GO:0010200response to chitin1 (0.47%)0100000000
GO:0010157response to chlorate1 (0.47%)0000000010
GO:0010583response to cyclopentenone1 (0.47%)1000000000
GO:0009605response to external stimulus1 (0.47%)0001000000
GO:0010332response to gamma radiation1 (0.47%)1000000000
GO:0009629response to gravity1 (0.47%)0001000000
GO:0009408response to heat1 (0.47%)0000000010
GO:0010212response to ionizing radiation1 (0.47%)1000000000
GO:0080167response to karrikin1 (0.47%)0000010000
GO:0009624response to nematode1 (0.47%)0000001000
GO:1901698response to nitrogen compound1 (0.47%)0100000000
GO:0010243response to organonitrogen compound1 (0.47%)0100000000
GO:0006979response to oxidative stress1 (0.47%)0000100000
GO:0009751response to salicylic acid1 (0.47%)0000100000
GO:0009415response to water1 (0.47%)0000000010
GO:0009414response to water deprivation1 (0.47%)0000000010
GO:0042147retrograde transport, endosome to Golgi1 (0.47%)1000000000
GO:0048511rhythmic process1 (0.47%)0000000001
GO:0042455ribonucleoside biosynthetic process1 (0.47%)0000000100
GO:0042454ribonucleoside catabolic process1 (0.47%)0000010000
GO:0009156ribonucleoside monophosphate biosynthetic process1 (0.47%)0000000100
GO:0009161ribonucleoside monophosphate metabolic process1 (0.47%)0000000100
GO:0009201ribonucleoside triphosphate biosynthetic process1 (0.47%)0000000100
GO:0009203ribonucleoside triphosphate catabolic process1 (0.47%)0000010000
GO:0009260ribonucleotide biosynthetic process1 (0.47%)0000000100
GO:0009261ribonucleotide catabolic process1 (0.47%)0000010000
GO:0046390ribose phosphate biosynthetic process1 (0.47%)0000000100
GO:0048768root hair cell tip growth1 (0.47%)0000000001
GO:0048767root hair elongation1 (0.47%)0000000001
GO:0044550secondary metabolite biosynthetic process1 (0.47%)0010000000
GO:0090487secondary metabolite catabolic process1 (0.47%)1000000000
GO:0046903secretion1 (0.47%)0000000010
GO:0032940secretion by cell1 (0.47%)0000000010
GO:0044802single-organism membrane organization1 (0.47%)0000001000
GO:0007062sister chromatid cohesion1 (0.47%)1000000000
GO:0007264small GTPase mediated signal transduction1 (0.47%)0000010000
GO:0044282small molecule catabolic process1 (0.47%)1000000000
GO:0009799specification of symmetry1 (0.47%)1000000000
GO:0048443stamen development1 (0.47%)0000001000
GO:0005982starch metabolic process1 (0.47%)0001000000
GO:0048864stem cell development1 (0.47%)0000000001
GO:0048863stem cell differentiation1 (0.47%)0000000001
GO:0019827stem cell maintenance1 (0.47%)0000000001
GO:0010374stomatal complex development1 (0.47%)0000001000
GO:0010103stomatal complex morphogenesis1 (0.47%)0000001000
GO:0044272sulfur compound biosynthetic process1 (0.47%)0010000000
GO:0006790sulfur compound metabolic process1 (0.47%)0010000000
GO:0007129synapsis1 (0.47%)1000000000
GO:0000723telomere maintenance1 (0.47%)1000000000
GO:0043247telomere maintenance in response to DNA damage1 (0.47%)1000000000
GO:0032200telomere organization1 (0.47%)1000000000
GO:0009407toxin catabolic process1 (0.47%)1000000000
GO:0009404toxin metabolic process1 (0.47%)1000000000
GO:0000041transition metal ion transport1 (0.47%)1000000000
GO:0009606tropism1 (0.47%)0001000000
GO:0006511ubiquitin-dependent protein catabolic process1 (0.47%)0000010000
GO:0015840urea transport1 (0.47%)0000010000
GO:0007034vacuolar transport1 (0.47%)1000000000
GO:0006833water transport1 (0.47%)0000010000
GO:0010051xylem and phloem pattern formation1 (0.47%)1000000000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding142 (66.67%)771012292120101313
GO:1901363heterocyclic compound binding100 (46.95%)44882115149116
GO:0097159organic cyclic compound binding100 (46.95%)44882115149116
GO:0003676nucleic acid binding71 (33.33%)345612118895
GO:0003824catalytic activity62 (29.11%)4343111610137
GO:0043167ion binding58 (27.23%)434416911124
GO:0005515protein binding53 (24.88%)341411114438
GO:1901265nucleoside phosphate binding43 (20.19%)2244948442
GO:0000166nucleotide binding43 (20.19%)2244948442
GO:0036094small molecule binding43 (20.19%)2244948442
GO:0043169cation binding33 (15.49%)3122966112
GO:0046872metal ion binding33 (15.49%)3122966112
GO:0043168anion binding28 (13.15%)1232835112
GO:0003723RNA binding27 (12.68%)1022323572
GO:0003677DNA binding26 (12.21%)2321472221
GO:0046914transition metal ion binding24 (11.27%)1111566111
GO:0030554adenyl nucleotide binding23 (10.80%)0022834112
GO:0032559adenyl ribonucleotide binding23 (10.80%)0022834112
GO:0097367carbohydrate derivative binding23 (10.80%)0022834112
GO:0001882nucleoside binding23 (10.80%)0022834112
GO:0001883purine nucleoside binding23 (10.80%)0022834112
GO:0017076purine nucleotide binding23 (10.80%)0022834112
GO:0032550purine ribonucleoside binding23 (10.80%)0022834112
GO:0032555purine ribonucleotide binding23 (10.80%)0022834112
GO:0032549ribonucleoside binding23 (10.80%)0022834112
GO:0032553ribonucleotide binding23 (10.80%)0022834112
GO:0016740transferase activity23 (10.80%)2112942011
GO:0005524ATP binding22 (10.33%)0021834112
GO:0035639purine ribonucleoside triphosphate binding22 (10.33%)0021834112
GO:0008270zinc ion binding18 (8.45%)1101356100
GO:0016787hydrolase activity17 (7.98%)1110173102
GO:0016772transferase activity, transferring phosphorus-containing groups17 (7.98%)0011842001
GO:0016301kinase activity16 (7.51%)0011832001
GO:0016491oxidoreductase activity16 (7.51%)2121123022
GO:0016773phosphotransferase activity, alcohol group as acceptor16 (7.51%)0011832001
GO:0005198structural molecule activity16 (7.51%)0123102133
GO:0004672protein kinase activity14 (6.57%)0001732001
GO:0004674protein serine/threonine kinase activity12 (5.63%)0001532001
GO:0003735structural constituent of ribosome12 (5.63%)0121101132
GO:0001071nucleic acid binding transcription factor activity10 (4.69%)1100041201
GO:0046983protein dimerization activity10 (4.69%)0001222003
GO:0003700sequence-specific DNA binding transcription factor activity10 (4.69%)1100041201
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen9 (4.23%)1111120020
GO:0016788hydrolase activity, acting on ester bonds8 (3.76%)1000150001
GO:0019843rRNA binding7 (3.29%)0010100131
GO:0043565sequence-specific DNA binding7 (3.29%)1200031000
GO:0003682chromatin binding6 (2.82%)0100300110
GO:0051213dioxygenase activity6 (2.82%)1111010010
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors6 (2.82%)1111010010
GO:0050662coenzyme binding4 (1.88%)1010002000
GO:0048037cofactor binding4 (1.88%)1010002000
GO:0016874ligase activity4 (1.88%)0000021001
GO:0016614oxidoreductase activity, acting on CH-OH group of donors4 (1.88%)1010002000
GO:0022857transmembrane transporter activity4 (1.88%)1010010100
GO:0005215transporter activity4 (1.88%)1010010100
GO:0030246carbohydrate binding3 (1.41%)0001011000
GO:0030234enzyme regulator activity3 (1.41%)0000010002
GO:0050660flavin adenine dinucleotide binding3 (1.41%)1010001000
GO:0020037heme binding3 (1.41%)0000110010
GO:0016817hydrolase activity, acting on acid anhydrides3 (1.41%)0010001100
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides3 (1.41%)0010001100
GO:0042802identical protein binding3 (1.41%)0000000111
GO:0005506iron ion binding3 (1.41%)0000110010
GO:0008168methyltransferase activity3 (1.41%)0101000010
GO:0004518nuclease activity3 (1.41%)0000030000
GO:0022891substrate-specific transmembrane transporter activity3 (1.41%)1000010100
GO:0022892substrate-specific transporter activity3 (1.41%)1000010100
GO:0046906tetrapyrrole binding3 (1.41%)0000110010
GO:0016757transferase activity, transferring glycosyl groups3 (1.41%)2000100000
GO:0016741transferase activity, transferring one-carbon groups3 (1.41%)0101000010
GO:0070742C2H2 zinc finger domain binding2 (0.94%)0000000200
GO:0030695GTPase regulator activity2 (0.94%)0000010001
GO:0008171O-methyltransferase activity2 (0.94%)0001000010
GO:0005088Ras guanyl-nucleotide exchange factor activity2 (0.94%)0000000110
GO:0005089Rho guanyl-nucleotide exchange factor activity2 (0.94%)0000000110
GO:0008194UDP-glycosyltransferase activity2 (0.94%)1000100000
GO:0008375acetylglucosaminyltransferase activity2 (0.94%)1000100000
GO:0016881acid-amino acid ligase activity2 (0.94%)0000020000
GO:0022804active transmembrane transporter activity2 (0.94%)0010010000
GO:0004812aminoacyl-tRNA ligase activity2 (0.94%)0000001001
GO:0016830carbon-carbon lyase activity2 (0.94%)1000001000
GO:0052689carboxylic ester hydrolase activity2 (0.94%)0000010001
GO:0008324cation transmembrane transporter activity2 (0.94%)0000010100
GO:0009055electron carrier activity2 (0.94%)0000110000
GO:0004527exonuclease activity2 (0.94%)0000020000
GO:0005085guanyl-nucleotide exchange factor activity2 (0.94%)0000000110
GO:0047325inositol tetrakisphosphate 1-kinase activity2 (0.94%)0010100000
GO:0051765inositol tetrakisphosphate kinase activity2 (0.94%)0010100000
GO:0051766inositol trisphosphate kinase activity2 (0.94%)0010100000
GO:0052726inositol-1,3,4-trisphosphate 5-kinase activity2 (0.94%)0010100000
GO:0052725inositol-1,3,4-trisphosphate 6-kinase activity2 (0.94%)0010100000
GO:0015075ion transmembrane transporter activity2 (0.94%)0000010100
GO:0016876ligase activity, forming aminoacyl-tRNA and related compounds2 (0.94%)0000001001
GO:0016879ligase activity, forming carbon-nitrogen bonds2 (0.94%)0000020000
GO:0016875ligase activity, forming carbon-oxygen bonds2 (0.94%)0000001001
GO:0008289lipid binding2 (0.94%)0200000000
GO:0016829lyase activity2 (0.94%)1000001000
GO:0000287magnesium ion binding2 (0.94%)0010100000
GO:0030145manganese ion binding2 (0.94%)0010100000
GO:0060089molecular transducer activity2 (0.94%)0000000110
GO:0017111nucleoside-triphosphatase activity2 (0.94%)0010000100
GO:0060589nucleoside-triphosphatase regulator activity2 (0.94%)0000010001
GO:0045735nutrient reservoir activity2 (0.94%)0010100000
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor2 (0.94%)0000002000
GO:0005543phospholipid binding2 (0.94%)0200000000
GO:0000156phosphorelay response regulator activity2 (0.94%)0000000110
GO:0008081phosphoric diester hydrolase activity2 (0.94%)1000100000
GO:0042578phosphoric ester hydrolase activity2 (0.94%)1000100000
GO:0019904protein domain specific binding2 (0.94%)0000000200
GO:0016462pyrophosphatase activity2 (0.94%)0010000100
GO:0005102receptor binding2 (0.94%)0000200000
GO:0033612receptor serine/threonine kinase binding2 (0.94%)0000200000
GO:0004871signal transducer activity2 (0.94%)0000000110
GO:0005083small GTPase regulator activity2 (0.94%)0000010001
GO:0019787small conjugating protein ligase activity2 (0.94%)0000020000
GO:0016758transferase activity, transferring hexosyl groups2 (0.94%)1000100000
GO:0004842ubiquitin-protein ligase activity2 (0.94%)0000020000
GO:0051082unfolded protein binding2 (0.94%)0000000011
GO:00526242-phytyl-1,4-naphthoquinone methyltransferase activity1 (0.47%)0000000010
GO:0043531ADP binding1 (0.47%)0001000000
GO:0016887ATPase activity1 (0.47%)0010000000
GO:0042623ATPase activity, coupled1 (0.47%)0010000000
GO:0043492ATPase activity, coupled to movement of substances1 (0.47%)0010000000
GO:0042626ATPase activity, coupled to transmembrane movement of substances1 (0.47%)0010000000
GO:0008169C-methyltransferase activity1 (0.47%)0000000010
GO:0005092GDP-dissociation inhibitor activity1 (0.47%)0000000001
GO:0005096GTPase activator activity1 (0.47%)0000010000
GO:0030060L-malate dehydrogenase activity1 (0.47%)0000001000
GO:0008170N-methyltransferase activity1 (0.47%)0100000000
GO:0051287NAD binding1 (0.47%)0000001000
GO:0015405P-P-bond-hydrolysis-driven transmembrane transporter activity1 (0.47%)0010000000
GO:0005097Rab GTPase activator activity1 (0.47%)0000010000
GO:0005099Ras GTPase activator activity1 (0.47%)0000010000
GO:0005094Rho GDP-dissociation inhibitor activity1 (0.47%)0000000001
GO:0008757S-adenosylmethionine-dependent methyltransferase activity1 (0.47%)0100000000
GO:0008762UDP-N-acetylmuramate dehydrogenase activity1 (0.47%)0000001000
GO:0048040UDP-glucuronate decarboxylase activity1 (0.47%)0000001000
GO:0016832aldehyde-lyase activity1 (0.47%)1000000000
GO:0042887amide transmembrane transporter activity1 (0.47%)0000010000
GO:0005275amine transmembrane transporter activity1 (0.47%)0000010000
GO:0051739ammonia transmembrane transporter activity1 (0.47%)0000010000
GO:0016831carboxy-lyase activity1 (0.47%)0000001000
GO:0015267channel activity1 (0.47%)0000010000
GO:0008812choline dehydrogenase activity1 (0.47%)1000000000
GO:0005507copper ion binding1 (0.47%)0000000001
GO:0004817cysteine-tRNA ligase activity1 (0.47%)0000001000
GO:0008234cysteine-type peptidase activity1 (0.47%)0000010000
GO:0019139cytokinin dehydrogenase activity1 (0.47%)0000001000
GO:0008092cytoskeletal protein binding1 (0.47%)0000000100
GO:0008047enzyme activator activity1 (0.47%)0000010000
GO:0004857enzyme inhibitor activity1 (0.47%)0000000001
GO:0042393histone binding1 (0.47%)0100000000
GO:0042054histone methyltransferase activity1 (0.47%)0100000000
GO:0018024histone-lysine N-methyltransferase activity1 (0.47%)0100000000
GO:0015078hydrogen ion transmembrane transporter activity1 (0.47%)0000000100
GO:0016820hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances1 (0.47%)0010000000
GO:0016798hydrolase activity, acting on glycosyl bonds1 (0.47%)0000001000
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds1 (0.47%)0000001000
GO:0022890inorganic cation transmembrane transporter activity1 (0.47%)0000000100
GO:0016853isomerase activity1 (0.47%)0000010000
GO:0016298lipase activity1 (0.47%)0000010000
GO:0016278lysine N-methyltransferase activity1 (0.47%)0100000000
GO:0004824lysine-tRNA ligase activity1 (0.47%)0000000001
GO:0048027mRNA 5'-UTR binding1 (0.47%)0000010000
GO:0003729mRNA binding1 (0.47%)0000010000
GO:0022884macromolecule transmembrane transporter activity1 (0.47%)1000000000
GO:0016615malate dehydrogenase activity1 (0.47%)0000001000
GO:0046593mandelonitrile lyase activity1 (0.47%)1000000000
GO:0008327methyl-CpG binding1 (0.47%)0100000000
GO:0010428methyl-CpNpG binding1 (0.47%)0100000000
GO:0010429methyl-CpNpN binding1 (0.47%)0100000000
GO:0015200methylammonium transmembrane transporter activity1 (0.47%)0000010000
GO:0008017microtubule binding1 (0.47%)0000000100
GO:0003777microtubule motor activity1 (0.47%)0000000100
GO:0015077monovalent inorganic cation transmembrane transporter activity1 (0.47%)0000000100
GO:0003774motor activity1 (0.47%)0000000100
GO:0015101organic cation transmembrane transporter activity1 (0.47%)0000010000
GO:0016645oxidoreductase activity, acting on the CH-NH group of donors1 (0.47%)0000001000
GO:0022803passive transmembrane transporter activity1 (0.47%)0000010000
GO:0030599pectinesterase activity1 (0.47%)0000000001
GO:0008233peptidase activity1 (0.47%)0000010000
GO:0070011peptidase activity, acting on L-amino acid peptides1 (0.47%)0000010000
GO:0008965phosphoenolpyruvate-protein phosphotransferase activity1 (0.47%)0000010000
GO:0016775phosphotransferase activity, nitrogenous group as acceptor1 (0.47%)0000010000
GO:0010313phytochrome binding1 (0.47%)0000010000
GO:0015399primary active transmembrane transporter activity1 (0.47%)0010000000
GO:0032403protein complex binding1 (0.47%)0000000100
GO:0008276protein methyltransferase activity1 (0.47%)0100000000
GO:0008320protein transmembrane transporter activity1 (0.47%)1000000000
GO:0008565protein transporter activity1 (0.47%)1000000000
GO:0016279protein-lysine N-methyltransferase activity1 (0.47%)0100000000
GO:0019783small conjugating protein-specific protease activity1 (0.47%)0000010000
GO:0022838substrate-specific channel activity1 (0.47%)0000010000
GO:0016790thiolester hydrolase activity1 (0.47%)0000010000
GO:0004806triglyceride lipase activity1 (0.47%)0000010000
GO:0015631tubulin binding1 (0.47%)0000000100
GO:0004221ubiquitin thiolesterase activity1 (0.47%)0000010000
GO:0004843ubiquitin-specific protease activity1 (0.47%)0000010000
GO:0015204urea transmembrane transporter activity1 (0.47%)0000010000
GO:0015250water channel activity1 (0.47%)0000010000
GO:0005372water transmembrane transporter activity1 (0.47%)0000010000

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell98 (46.01%)176361481281014
GO:0044464cell part98 (46.01%)176361481281014
GO:0005622intracellular94 (44.13%)165361381281013
GO:0044424intracellular part90 (42.25%)165361371071013
GO:0043229intracellular organelle69 (32.39%)1352312486106
GO:0043226organelle69 (32.39%)1352312486106
GO:0043231intracellular membrane-bounded organelle65 (30.52%)135231247595
GO:0043227membrane-bounded organelle65 (30.52%)135231247595
GO:0005737cytoplasm54 (25.35%)10334926269
GO:0044444cytoplasmic part48 (22.54%)8334926157
GO:0005634nucleus38 (17.84%)7213435463
GO:0032991macromolecular complex26 (12.21%)1123232345
GO:0016020membrane25 (11.74%)6223512112
GO:0009507chloroplast24 (11.27%)1321613142
GO:0009536plastid24 (11.27%)1321613142
GO:0044446intracellular organelle part20 (9.39%)3121222241
GO:0044422organelle part20 (9.39%)3121222241
GO:0005829cytosol17 (7.98%)1124113004
GO:0071944cell periphery15 (7.04%)2211411012
GO:0043234protein complex14 (6.57%)1002131213
GO:0043232intracellular non-membrane-bounded organelle13 (6.10%)0121101232
GO:0043228non-membrane-bounded organelle13 (6.10%)0121101232
GO:0005886plasma membrane13 (6.10%)2211411010
GO:0030529ribonucleoprotein complex12 (5.63%)0121101132
GO:0005840ribosome12 (5.63%)0121101132
GO:0030054cell junction10 (4.69%)0222011011
GO:0005911cell-cell junction10 (4.69%)0222011011
GO:0044434chloroplast part10 (4.69%)0010112131
GO:0009506plasmodesma10 (4.69%)0222011011
GO:0044435plastid part10 (4.69%)0010112131
GO:0055044symplast10 (4.69%)0222011011
GO:0009570chloroplast stroma9 (4.23%)0010102131
GO:0015934large ribosomal subunit9 (4.23%)0121100121
GO:0044425membrane part9 (4.23%)2112001101
GO:0031090organelle membrane9 (4.23%)3111011010
GO:0009532plastid stroma9 (4.23%)0010102131
GO:0044391ribosomal subunit9 (4.23%)0121100121
GO:0005773vacuole9 (4.23%)2111111010
GO:0005618cell wall8 (3.76%)0211010012
GO:0009941chloroplast envelope8 (3.76%)0010110131
GO:0031975envelope8 (3.76%)0010110131
GO:0030312external encapsulating structure8 (3.76%)0211010012
GO:0031967organelle envelope8 (3.76%)0010110131
GO:0009526plastid envelope8 (3.76%)0010110131
GO:0005774vacuolar membrane7 (3.29%)1111011010
GO:0044437vacuolar part7 (3.29%)1111011010
GO:0005794Golgi apparatus6 (2.82%)3000210000
GO:0005576extracellular region6 (2.82%)0000202011
GO:0000315organellar large ribosomal subunit6 (2.82%)0010100121
GO:0000313organellar ribosome6 (2.82%)0010100121
GO:0000311plastid large ribosomal subunit6 (2.82%)0010100121
GO:0009547plastid ribosome6 (2.82%)0010100121
GO:0070013intracellular organelle lumen5 (2.35%)0011110010
GO:0031974membrane-enclosed lumen5 (2.35%)0011110010
GO:0005739mitochondrion5 (2.35%)2000001011
GO:0031981nuclear lumen5 (2.35%)0011110010
GO:0044428nuclear part5 (2.35%)0011110010
GO:0043233organelle lumen5 (2.35%)0011110010
GO:0048046apoplast4 (1.88%)0000002011
GO:0048475coated membrane4 (1.88%)0002001001
GO:0030117membrane coat4 (1.88%)0002001001
GO:1902494catalytic complex3 (1.41%)0000020001
GO:0005677chromatin silencing complex3 (1.41%)0000110010
GO:0022625cytosolic large ribosomal subunit3 (1.41%)0111000000
GO:0044445cytosolic part3 (1.41%)0111000000
GO:0022626cytosolic ribosome3 (1.41%)0111000000
GO:0031224intrinsic to membrane3 (1.41%)1110000000
GO:0016604nuclear body3 (1.41%)0000110010
GO:0016607nuclear speck3 (1.41%)0000110010
GO:0005654nucleoplasm3 (1.41%)0000110010
GO:0044451nucleoplasm part3 (1.41%)0000110010
GO:0000151ubiquitin ligase complex3 (1.41%)0000020001
GO:0012505endomembrane system2 (0.94%)2000000000
GO:0005783endoplasmic reticulum2 (0.94%)1000000010
GO:0044421extracellular region part2 (0.94%)0000200000
GO:0005615extracellular space2 (0.94%)0000200000
GO:0016021integral to membrane2 (0.94%)1010000000
GO:0005730nucleolus2 (0.94%)0011000000
GO:0009505plant-type cell wall2 (0.94%)0000010001
GO:0080008Cul4-RING ubiquitin ligase complex1 (0.47%)0000000001
GO:0044431Golgi apparatus part1 (0.47%)1000000000
GO:0031985Golgi cisterna1 (0.47%)1000000000
GO:0032580Golgi cisterna membrane1 (0.47%)1000000000
GO:0000139Golgi membrane1 (0.47%)1000000000
GO:0005795Golgi stack1 (0.47%)1000000000
GO:0031225anchored to membrane1 (0.47%)0100000000
GO:0046658anchored to plasma membrane1 (0.47%)0100000000
GO:0042807central vacuole1 (0.47%)0000010000
GO:0031461cullin-RING ubiquitin ligase complex1 (0.47%)0000000001
GO:0044430cytoskeletal part1 (0.47%)0000000100
GO:0005856cytoskeleton1 (0.47%)0000000100
GO:0005789endoplasmic reticulum membrane1 (0.47%)1000000000
GO:0044432endoplasmic reticulum part1 (0.47%)1000000000
GO:0005793endoplasmic reticulum-Golgi intermediate compartment1 (0.47%)1000000000
GO:0033116endoplasmic reticulum-Golgi intermediate compartment membrane1 (0.47%)1000000000
GO:0044440endosomal part1 (0.47%)1000000000
GO:0005768endosome1 (0.47%)1000000000
GO:0010008endosome membrane1 (0.47%)1000000000
GO:0031226intrinsic to plasma membrane1 (0.47%)0100000000
GO:0005871kinesin complex1 (0.47%)0000000100
GO:0005770late endosome1 (0.47%)1000000000
GO:0031902late endosome membrane1 (0.47%)1000000000
GO:0005875microtubule associated complex1 (0.47%)0000000100
GO:0015630microtubule cytoskeleton1 (0.47%)0000000100
GO:0005771multivesicular body1 (0.47%)1000000000
GO:0042175nuclear outer membrane-endoplasmic reticulum membrane network1 (0.47%)1000000000
GO:0031984organelle subcompartment1 (0.47%)1000000000
GO:0000325plant-type vacuole1 (0.47%)0000010000
GO:0009705plant-type vacuole membrane1 (0.47%)0000010000
GO:0044459plasma membrane part1 (0.47%)0100000000
GO:0016272prefoldin complex1 (0.47%)0000000001
GO:0000326protein storage vacuole1 (0.47%)0000010000
GO:0045259proton-transporting ATP synthase complex1 (0.47%)0000000100
GO:0045263proton-transporting ATP synthase complex, coupling factor F(o)1 (0.47%)0000000100
GO:0016469proton-transporting two-sector ATPase complex1 (0.47%)0000000100
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain1 (0.47%)0000000100
GO:0030904retromer complex1 (0.47%)1000000000
GO:0000322storage vacuole1 (0.47%)0000010000