PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_288
Name: NONAMERMOTIFTAH3H4
Description: Nonamer motif found in promoter of wheat histone genes H3 and H4

#Associated genes: 233
#Associated MapMan terms: 105

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	38 (16.31%)	2	2	4	18	3	6	0	3
27.3	RNA.regulation of transcription	33 (14.16%)	1	2	3	16	2	6	0	3
30	signalling	22 (9.44%)	3	8	2	5	1	1	1	1
31	cell	19 (8.15%)	3	5	0	1	4	2	3	1
28	DNA	13 (5.58%)	0	2	0	1	2	1	6	1
28.1	DNA.synthesis/chromatin structure	13 (5.58%)	0	2	0	1	2	1	6	1
28.1.3	DNA.synthesis/chromatin structure.histone	13 (5.58%)	0	2	0	1	2	1	6	1
29	protein	12 (5.15%)	2	3	2	0	0	1	0	4
30.11	signalling.light	10 (4.29%)	1	3	1	3	0	1	1	0
31.3	cell.cycle	10 (4.29%)	1	3	0	0	1	2	3	0
20	stress	9 (3.86%)	1	0	0	5	0	1	1	1
27.3.99	RNA.regulation of transcription.unclassified	9 (3.86%)	0	0	1	6	0	2	0	0
15	metal handling	8 (3.43%)	0	0	2	4	0	0	2	0
15.2	metal handling.binding, chelation and storage	8 (3.43%)	0	0	2	4	0	0	2	0
20.2	stress.abiotic	8 (3.43%)	0	0	0	5	0	1	1	1
20.2.1	stress.abiotic.heat	8 (3.43%)	0	0	0	5	0	1	1	1
26	misc	7 (3.00%)	0	1	0	5	1	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	7 (3.00%)	0	1	0	4	0	1	0	1
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	6 (2.58%)	0	0	1	3	0	1	0	1
17	hormone metabolism	5 (2.15%)	0	0	0	3	1	0	0	1
17.2	hormone metabolism.auxin	5 (2.15%)	0	0	0	3	1	0	0	1
17.2.2	hormone metabolism.auxin.signal transduction	5 (2.15%)	0	0	0	3	1	0	0	1
27.1	RNA.processing	5 (2.15%)	1	0	1	2	1	0	0	0
29.6	protein.folding	5 (2.15%)	1	3	0	0	0	0	0	1
30.4	signalling.phosphinositides	5 (2.15%)	1	1	0	2	0	0	0	1
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	5 (2.15%)	1	1	0	2	0	0	0	1
31.1	cell.organisation	5 (2.15%)	1	1	0	1	2	0	0	0
16	secondary metabolism	4 (1.72%)	0	1	1	2	0	0	0	0
26.13	misc.acid and other phosphatases	4 (1.72%)	0	1	0	3	0	0	0	0
30.2	signalling.receptor kinases	4 (1.72%)	0	4	0	0	0	0	0	0
31.2	cell.division	4 (1.72%)	1	1	0	0	1	0	0	1
13	amino acid metabolism	3 (1.29%)	0	0	0	0	2	1	0	0
13.1	amino acid metabolism.synthesis	3 (1.29%)	0	0	0	0	2	1	0	0
13.1.3	amino acid metabolism.synthesis.aspartate family	3 (1.29%)	0	0	0	0	2	1	0	0
13.1.3.4	amino acid metabolism.synthesis.aspartate family.methionine	3 (1.29%)	0	0	0	0	2	1	0	0
21	redox	3 (1.29%)	0	0	0	0	3	0	0	0
29.4	protein.postranslational modification	3 (1.29%)	0	0	1	0	0	1	0	1
7	OPP	2 (0.86%)	0	0	0	0	2	0	0	0
10	cell wall	2 (0.86%)	0	0	0	0	1	1	0	0
10.7	cell wall.modification	2 (0.86%)	0	0	0	0	1	1	0	0
11	lipid metabolism	2 (0.86%)	1	0	1	0	0	0	0	0
16.1	secondary metabolism.isoprenoids	2 (0.86%)	0	0	0	2	0	0	0	0
16.1.1	secondary metabolism.isoprenoids.non-mevalonate pathway	2 (0.86%)	0	0	0	2	0	0	0	0
16.2	secondary metabolism.phenylpropanoids	2 (0.86%)	0	1	1	0	0	0	0	0
21.2	redox.ascorbate and glutathione	2 (0.86%)	0	0	0	0	2	0	0	0
27.1.2	RNA.processing.RNA helicase	2 (0.86%)	0	0	1	0	1	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	2 (0.86%)	0	0	0	1	0	0	0	1
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	2 (0.86%)	0	0	1	0	0	1	0	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	2 (0.86%)	0	1	0	1	0	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	2 (0.86%)	1	0	0	0	1	0	0	0
29.2.1.2.1.23	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S23	2 (0.86%)	0	0	1	0	0	1	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	2 (0.86%)	0	2	0	0	0	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	2 (0.86%)	0	2	0	0	0	0	0	0
7.1	OPP.oxidative PP	2 (0.86%)	0	0	0	0	2	0	0	0
29.5	protein.degradation	2 (0.86%)	1	0	0	0	0	0	0	1
30.7	signalling.14-3-3 proteins	2 (0.86%)	0	0	1	0	1	0	0	0
7.1.3	OPP.oxidative PP.6-phosphogluconate dehydrogenase	2 (0.86%)	0	0	0	0	2	0	0	0
34	transport	2 (0.86%)	1	1	0	0	0	0	0	0
1	PS	1 (0.43%)	0	0	0	0	0	0	0	1
1.3	PS.calvin cycle	1 (0.43%)	0	0	0	0	0	0	0	1
1.3.8	PS.calvin cycle.transketolase	1 (0.43%)	0	0	0	0	0	0	0	1
3	minor CHO metabolism	1 (0.43%)	0	0	0	0	0	0	0	1
3.2	minor CHO metabolism.trehalose	1 (0.43%)	0	0	0	0	0	0	0	1
4	glycolysis	1 (0.43%)	1	0	0	0	0	0	0	0
11.1	lipid metabolism.FA synthesis and FA elongation	1 (0.43%)	1	0	0	0	0	0	0	0
11.1.9	lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase	1 (0.43%)	1	0	0	0	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.43%)	0	0	1	0	0	0	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	1 (0.43%)	0	0	1	0	0	0	0	0
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	1 (0.43%)	0	0	1	0	0	0	0	0
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	1 (0.43%)	0	1	0	0	0	0	0	0
16.2.1.1	secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL	1 (0.43%)	0	1	0	0	0	0	0	0
19	tetrapyrrole synthesis	1 (0.43%)	0	0	0	0	1	0	0	0
19.12	tetrapyrrole synthesis.magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase	1 (0.43%)	0	0	0	0	1	0	0	0
20.1	stress.biotic	1 (0.43%)	1	0	0	0	0	0	0	0
20.1.7	stress.biotic.PR-proteins	1 (0.43%)	1	0	0	0	0	0	0	0
21.1	redox.thioredoxin	1 (0.43%)	0	0	0	0	1	0	0	0
23	nucleotide metabolism	1 (0.43%)	0	0	0	0	1	0	0	0
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	1 (0.43%)	0	0	0	0	1	0	0	0
23.4.99	nucleotide metabolism.phosphotransfer and pyrophosphatases.misc	1 (0.43%)	0	0	0	0	1	0	0	0
26.28	misc.GDSL-motif lipase	1 (0.43%)	0	0	0	1	0	0	0	0
26.4	misc.beta 1,3 glucan hydrolases	1 (0.43%)	0	0	0	1	0	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.43%)	0	0	0	0	1	0	0	0
27.1.19	RNA.processing.ribonucleases	1 (0.43%)	1	0	0	0	0	0	0	0
27.3.17	RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family	1 (0.43%)	0	0	0	1	0	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.43%)	0	0	0	0	0	1	0	0
27.3.71	RNA.regulation of transcription.SNF7	1 (0.43%)	0	0	0	0	1	0	0	0
29.2	protein.synthesis	1 (0.43%)	0	0	1	0	0	0	0	0
29.2.3	protein.synthesis.initiation	1 (0.43%)	0	0	1	0	0	0	0	0
29.3	protein.targeting	1 (0.43%)	0	0	0	0	0	0	0	1
29.3.4	protein.targeting.secretory pathway	1 (0.43%)	0	0	0	0	0	0	0	1
29.3.4.3	protein.targeting.secretory pathway.vacuole	1 (0.43%)	0	0	0	0	0	0	0	1
29.4.1	protein.postranslational modification.kinase	1 (0.43%)	0	0	0	0	0	1	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	1 (0.43%)	0	0	0	0	0	1	0	0
29.5.11	protein.degradation.ubiquitin	1 (0.43%)	1	0	0	0	0	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	1 (0.43%)	0	0	0	0	0	1	0	0
29.5.11.4.5.2	protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ	1 (0.43%)	0	1	0	0	0	0	0	0
29.5.7	protein.degradation.metalloprotease	1 (0.43%)	0	0	0	0	0	0	0	1
3.2.3	minor CHO metabolism.trehalose.potential TPS/TPP	1 (0.43%)	0	0	0	0	0	0	0	1
30.2.99	signalling.receptor kinases.misc	1 (0.43%)	0	1	0	0	0	0	0	0
30.3	signalling.calcium	1 (0.43%)	1	0	0	0	0	0	0	0
31.3.1	cell.cycle.peptidylprolyl isomerase	1 (0.43%)	0	0	0	0	0	1	0	0
4.1	glycolysis.cytosolic branch	1 (0.43%)	1	0	0	0	0	0	0	0
34.20	transport.porins	1 (0.43%)	1	0	0	0	0	0	0	0
34.8	transport.metabolite transporters at the envelope membrane	1 (0.43%)	0	1	0	0	0	0	0	0
4.1.13	glycolysis.cytosolic branch.enolase	1 (0.43%)	1	0	0	0	0	0	0	0